FC930930
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC930930 vs. ExPASy Swiss-Prot
Match: RS3A2_YEAS1 (40S ribosomal protein S1-B OS=Saccharomyces cerevisiae (strain RM11-1a) GN=RPS1B PE=3 SV=1) HSP 1 Score: 208.379 bits (529), Expect = 3.015e-53 Identity = 103/180 (57.22%), Postives = 132/180 (73.33%), Query Frame = 2 Query: 155 DWYDIKAPSCFRVRNVGKTLVARTQGTKIASEGLKHRVFEVSLGDLLNEEEHAYRKIRLRAEDVQGKNVLTNFWGMNFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFCIGFTKRLPNQVKRTCYAQTSQIRQIRRKMREIMVAQAASCDLKSLVEKFIAEVIGREIEKGTSSIYPL 694 +W+DIKAPS F RNVGKTLV ++ G K AS+ LK RV EV L DL E+H++RK++LR ++VQGKN+LTNF GM+FTTDKLRS+VRKW TLIEA V VKT+D++ LR+F I FT++ NQVKR YAQ+S IR IR+ + EI+ + + L L K I EVI +EIE T I+PL Sbjct: 28 EWFDIKAPSTFENRNVGKTLVNKSTGLKNASDALKGRVVEVCLADLQGSEDHSFRKVKLRVDEVQGKNLLTNFHGMDFTTDKLRSMVRKWQTLIEANVTVKTSDDYVLRIFAIAFTRKQANQVKRHSYAQSSHIRAIRKVISEILTREVQNSTLAQLTSKLIPEVINKEIENATKDIFPL 207
BLAST of FC930930 vs. ExPASy Swiss-Prot
Match: RS3A_PLAF7 (40S ribosomal protein S3a OS=Plasmodium falciparum (isolate 3D7) GN=MAL3P7.35 PE=3 SV=1) HSP 1 Score: 206.838 bits (525), Expect = 8.771e-53 Identity = 100/180 (55.56%), Postives = 135/180 (75.00%), Query Frame = 2 Query: 155 DWYDIKAPSCFRVRNVGKTLVARTQGTKIASEGLKHRVFEVSLGDLLNEEEHAYRKIRLRAEDVQGKNVLTNFWGMNFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFCIGFTKRLPNQVKRTCYAQTSQIRQIRRKMREIMVAQAASCDLKSLVEKFIAEVIGREIEKGTSSIYPL 694 +WYD+KAP F VRN GKTLV +T G K+A++ LK R++EV+L DL N+E+ A++KI+L + + ++ T+F G++ T DKL SL+RK +TLIE + DVKT DN+ LR+FCI FTK+ NQ K TCYAQTSQI++IR+KM +IM A+A+ LK LV+KFI E IG+EIEK IYPL Sbjct: 28 EWYDLKAPKMFLVRNFGKTLVTKTIGKKLATDSLKGRIYEVNLADLNNDEDQAHKKIKLSCDHIINRDCYTDFCGLSITRDKLCSLIRKGYTLIEGHTDVKTLDNYHLRMFCIAFTKKRQNQTKSTCYAQTSQIKKIRKKMVDIMTAEASKVLLKDLVKKFIPESIGKEIEKQCKKIYPL 207
BLAST of FC930930 vs. ExPASy Swiss-Prot
Match: RS3A_MONBE (40S ribosomal protein S3a OS=Monosiga brevicollis GN=34920 PE=3 SV=1) HSP 1 Score: 206.838 bits (525), Expect = 8.771e-53 Identity = 101/180 (56.11%), Postives = 137/180 (76.11%), Query Frame = 2 Query: 155 DWYDIKAPSCFRVRNVGKTLVARTQGTKIASEGLKHRVFEVSLGDLLNEEEHAYRKIRLRAEDVQGKNVLTNFWGMNFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFCIGFTKRLPNQVKRTCYAQTSQIRQIRRKMREIMVAQAASCDLKSLVEKFIAEVIGREIEKGTSSIYPL 694 +WYD+KAPS F+ R VGKT V RT GTK++++GL+ RV+E+SL DL N++E +RK++L+ E++QG LTNF GM+ TTDKLRSLV+KW +LIEA+VDVKT D + LR+F IGFTK+ N ++TCYAQ++Q R +R KM EIM + A+CDLK V K + IG+EI+K SI+PL Sbjct: 28 EWYDVKAPSYFKKRQVGKTPVNRTAGTKLSADGLRGRVYEMSLADL-NDDESTFRKVKLQVEEIQGTECLTNFHGMSLTTDKLRSLVKKWRSLIEAFVDVKTNDGYVLRIFSIGFTKKQANSDRKTCYAQSAQKRALRAKMVEIM-QREATCDLKEFVSKLMPGTIGQEIQKKCQSIFPL 205
BLAST of FC930930 vs. ExPASy Swiss-Prot
Match: RS3A_DROGR (40S ribosomal protein S3a OS=Drosophila grimshawi GN=RpS3A PE=3 SV=1) HSP 1 Score: 204.912 bits (520), Expect = 3.333e-52 Identity = 101/182 (55.49%), Postives = 131/182 (71.98%), Query Frame = 2 Query: 155 DWYDIKAPSCFRVRNVGKTLVARTQGTKIASEGLKHRVFEVSLGDLLNE--EEHAYRKIRLRAEDVQGKNVLTNFWGMNFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFCIGFTKRLPNQVKRTCYAQTSQIRQIRRKMREIMVAQAASCDLKSLVEKFIAEVIGREIEKGTSSIYPL 694 DWYD+KAP+ F+ R +GKTLV RTQG +IAS+ LK RVFEVSL DL + E ++RK RL AEDVQ +NVL NF GM+ TTDK RS+V+KW TLIEA V+ KT+D + LR+FCIGFT + ++TCYAQ SQ+R+IR +M +I+ + + DLK LV K + I ++IEK IYPL Sbjct: 29 DWYDVKAPNMFQTRQIGKTLVNRTQGQRIASDYLKGRVFEVSLADLQKDIDPERSFRKFRLIAEDVQDRNVLCNFHGMDLTTDKYRSMVKKWQTLIEAIVEAKTSDGYLLRIFCIGFTSKDQQSQRKTCYAQQSQVRKIRARMTDIITNEVSGVDLKQLVNKLALDSIAKDIEKSCQRIYPL 210
BLAST of FC930930 vs. ExPASy Swiss-Prot
Match: RS3A_DROVI (40S ribosomal protein S3a OS=Drosophila virilis GN=RpS3A PE=3 SV=1) HSP 1 Score: 204.527 bits (519), Expect = 4.353e-52 Identity = 101/182 (55.49%), Postives = 130/182 (71.43%), Query Frame = 2 Query: 155 DWYDIKAPSCFRVRNVGKTLVARTQGTKIASEGLKHRVFEVSLGDLLNE--EEHAYRKIRLRAEDVQGKNVLTNFWGMNFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFCIGFTKRLPNQVKRTCYAQTSQIRQIRRKMREIMVAQAASCDLKSLVEKFIAEVIGREIEKGTSSIYPL 694 DWYD+KAP+ F+ R +GKTLV RTQG +IAS+ LK RVFEVSL DL + E ++RK RL AEDVQ +NVL NF GM+ TTDK RS+V+KW TLIEA V+ KT D + LR+FCIGFT + ++TCYAQ SQ+R+IR +M +I+ + + DLK LV K + I ++IEK IYPL Sbjct: 29 DWYDVKAPNMFQTRQIGKTLVNRTQGQRIASDYLKGRVFEVSLADLQKDIDPERSFRKFRLIAEDVQDRNVLCNFHGMDLTTDKYRSMVKKWQTLIEAIVEAKTVDGYLLRVFCIGFTSKDQQSQRKTCYAQQSQVRKIRARMTDIITNEVSGADLKQLVNKLALDSIAKDIEKSCQRIYPL 210
BLAST of FC930930 vs. ExPASy Swiss-Prot
Match: RS3A_DROPS (40S ribosomal protein S3a OS=Drosophila pseudoobscura pseudoobscura GN=RpS3A PE=3 SV=1) HSP 1 Score: 204.142 bits (518), Expect = 5.686e-52 Identity = 101/182 (55.49%), Postives = 130/182 (71.43%), Query Frame = 2 Query: 155 DWYDIKAPSCFRVRNVGKTLVARTQGTKIASEGLKHRVFEVSLGDLLNE--EEHAYRKIRLRAEDVQGKNVLTNFWGMNFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFCIGFTKRLPNQVKRTCYAQTSQIRQIRRKMREIMVAQAASCDLKSLVEKFIAEVIGREIEKGTSSIYPL 694 DWYD+KAP+ F+ R +GKTLV RTQG +IAS+ LK RVFEVSL DL + E ++RK RL AEDVQ +NVL NF GM+ TTDK RS+V+KW TLIEA V+ KT D + LR+FCIGFT + ++TCYAQ SQ+R+IR +M +I+ + + DLK LV K + I ++IEK IYPL Sbjct: 29 DWYDVKAPNMFQTRQIGKTLVNRTQGQRIASDYLKGRVFEVSLADLQKDIDPERSFRKFRLIAEDVQDRNVLCNFHGMDLTTDKYRSMVKKWQTLIEAIVEAKTVDGYLLRVFCIGFTAKDQQSQRKTCYAQQSQVRKIRARMTDIITNEVSGADLKQLVNKLALDSIAKDIEKSCQRIYPL 210
BLAST of FC930930 vs. ExPASy Swiss-Prot
Match: RS3A_DROPE (40S ribosomal protein S3a OS=Drosophila persimilis GN=RpS3A PE=3 SV=1) HSP 1 Score: 204.142 bits (518), Expect = 5.686e-52 Identity = 101/182 (55.49%), Postives = 130/182 (71.43%), Query Frame = 2 Query: 155 DWYDIKAPSCFRVRNVGKTLVARTQGTKIASEGLKHRVFEVSLGDLLNE--EEHAYRKIRLRAEDVQGKNVLTNFWGMNFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFCIGFTKRLPNQVKRTCYAQTSQIRQIRRKMREIMVAQAASCDLKSLVEKFIAEVIGREIEKGTSSIYPL 694 DWYD+KAP+ F+ R +GKTLV RTQG +IAS+ LK RVFEVSL DL + E ++RK RL AEDVQ +NVL NF GM+ TTDK RS+V+KW TLIEA V+ KT D + LR+FCIGFT + ++TCYAQ SQ+R+IR +M +I+ + + DLK LV K + I ++IEK IYPL Sbjct: 29 DWYDVKAPNMFQTRQIGKTLVNRTQGQRIASDYLKGRVFEVSLADLQKDIDPERSFRKFRLIAEDVQDRNVLCNFHGMDLTTDKYRSMVKKWQTLIEAIVEAKTVDGYLLRVFCIGFTAKDQQSQRKTCYAQQSQVRKIRARMTDIITNEVSGADLKQLVNKLALDSIAKDIEKSCQRIYPL 210
BLAST of FC930930 vs. ExPASy Swiss-Prot
Match: RS3A_DROME (40S ribosomal protein S3a OS=Drosophila melanogaster GN=RpS3A PE=1 SV=3) HSP 1 Score: 204.142 bits (518), Expect = 5.686e-52 Identity = 101/182 (55.49%), Postives = 130/182 (71.43%), Query Frame = 2 Query: 155 DWYDIKAPSCFRVRNVGKTLVARTQGTKIASEGLKHRVFEVSLGDLLNE--EEHAYRKIRLRAEDVQGKNVLTNFWGMNFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFCIGFTKRLPNQVKRTCYAQTSQIRQIRRKMREIMVAQAASCDLKSLVEKFIAEVIGREIEKGTSSIYPL 694 DWYD+KAP+ F+ R +GKTLV RTQG +IAS+ LK RVFEVSL DL + E ++RK RL AEDVQ +NVL NF GM+ TTDK RS+V+KW TLIEA V+ KT D + LR+FCIGFT + ++TCYAQ SQ+R+IR +M +I+ + + DLK LV K + I ++IEK IYPL Sbjct: 29 DWYDVKAPNMFQTRQIGKTLVNRTQGQRIASDYLKGRVFEVSLADLQKDIDPERSFRKFRLIAEDVQDRNVLCNFHGMDLTTDKYRSMVKKWQTLIEAIVEAKTVDGYLLRVFCIGFTAKDQQSQRKTCYAQQSQVRKIRARMTDIITNEVSGADLKQLVNKLALDSIAKDIEKSCQRIYPL 210
BLAST of FC930930 vs. ExPASy Swiss-Prot
Match: RS3A_DROER (40S ribosomal protein S3a OS=Drosophila erecta GN=RpS3A PE=3 SV=1) HSP 1 Score: 204.142 bits (518), Expect = 5.686e-52 Identity = 101/182 (55.49%), Postives = 130/182 (71.43%), Query Frame = 2 Query: 155 DWYDIKAPSCFRVRNVGKTLVARTQGTKIASEGLKHRVFEVSLGDLLNE--EEHAYRKIRLRAEDVQGKNVLTNFWGMNFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFCIGFTKRLPNQVKRTCYAQTSQIRQIRRKMREIMVAQAASCDLKSLVEKFIAEVIGREIEKGTSSIYPL 694 DWYD+KAP+ F+ R +GKTLV RTQG +IAS+ LK RVFEVSL DL + E ++RK RL AEDVQ +NVL NF GM+ TTDK RS+V+KW TLIEA V+ KT D + LR+FCIGFT + ++TCYAQ SQ+R+IR +M +I+ + + DLK LV K + I ++IEK IYPL Sbjct: 29 DWYDVKAPNMFQTRQIGKTLVNRTQGQRIASDYLKGRVFEVSLADLQKDIDPERSFRKFRLIAEDVQDRNVLCNFHGMDLTTDKYRSMVKKWQTLIEAIVEAKTVDGYLLRVFCIGFTAKDQQSQRKTCYAQQSQVRKIRARMTDIITNEVSGADLKQLVNKLALDSIAKDIEKSCQRIYPL 210
BLAST of FC930930 vs. ExPASy Swiss-Prot
Match: RS3A_DROSE (40S ribosomal protein S3a OS=Drosophila sechellia GN=RpS3A PE=3 SV=1) HSP 1 Score: 203.756 bits (517), Expect = 7.426e-52 Identity = 101/182 (55.49%), Postives = 130/182 (71.43%), Query Frame = 2 Query: 155 DWYDIKAPSCFRVRNVGKTLVARTQGTKIASEGLKHRVFEVSLGDLLNE--EEHAYRKIRLRAEDVQGKNVLTNFWGMNFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFCIGFTKRLPNQVKRTCYAQTSQIRQIRRKMREIMVAQAASCDLKSLVEKFIAEVIGREIEKGTSSIYPL 694 DWYD+KAP+ F+ R +GKTLV RTQG +IAS+ LK RVFEVSL DL + E ++RK RL AEDVQ +NVL NF GM+ TTDK RS+V+KW TLIEA V+ KT D + LR+FCIGFT + ++TCYAQ SQ+R+IR +M +I+ + + DLK LV K + I ++IEK IYPL Sbjct: 29 DWYDVKAPNMFQTRQIGKTLVNRTQGQRIASDYLKGRVFEVSLADLQKDIDPERSFRKFRLIAEDVQDRNVLCNFHGMDLTTDKYRSMVKKWQTLIEAIVEAKTIDGYLLRVFCIGFTAKDQQSQRKTCYAQQSQVRKIRARMTDIITNEVSGADLKQLVNKLALDSIAKDIEKSCQRIYPL 210 The following BLAST results are available for this feature:
BLAST of FC930930 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 186
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Sequences
The
following sequences are available for this feature:
EST sequence >FC930930 ID=FC930930; Name=FC930930; organism=Citrus clementina; type=EST; length=696bpback to top |