FC930940
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC930940 vs. ExPASy Swiss-Prot
Match: GLNA_MIMIV (Putative glutamine synthetase OS=Acanthamoeba polyphaga mimivirus GN=MIMI_R565 PE=3 SV=1) HSP 1 Score: 96.2857 bits (238), Expect = 2.658e-22 Identity = 50/99 (50.51%), Postives = 63/99 (63.64%), Query Frame = 2 Query: 134 ESTDKIIAEYIWIGGSGMDMRSKARTLPGPVSDPSKL---PKWNYDGSSTGQAPGEDSEVILYPQAIFKDPFRRG-NNILVMCDAYTPAGEPIPTNKRH 418 E + I EY+WIGG+G ++RSK R L + KL P WNYDGSST QA G SEV LYP+ I++ PFRR N ++V+CD Y G P+ TN RH Sbjct: 14 EQSSISIIEYVWIGGNG-ELRSKTRVLYSSIMTGYKLSDIPVWNYDGSSTNQANGSSSEVFLYPRNIYRCPFRRNVNGVIVICDTYDVNGVPLETNHRH 111 HSP 2 Score: 30.0314 bits (66), Expect = 2.658e-22 Identity = 10/17 (58.82%), Postives = 13/17 (76.47%), Query Frame = 3 Query: 459 EEPWYGIEQEYTLLHXD 509 E+PWYG+EQEY + D Sbjct: 123 EKPWYGLEQEYFIFRKD 139
BLAST of FC930940 vs. ExPASy Swiss-Prot
Match: GLNA_FUSSH (Glutamine synthetase OS=Fusarium solani subsp. phaseoli GN=GLN1 PE=2 SV=1) HSP 1 Score: 91.2781 bits (225), Expect = 9.907e-22 Identity = 43/91 (47.25%), Postives = 60/91 (65.93%), Query Frame = 2 Query: 146 KIIAEYIWIGGSGMDMRSKARTLPGPVSDPSKLPKWNYDGSSTGQAPGEDSEVILYPQAIFKDPFRRGNNILVMCDAYTPAGEPIPTNKRH 418 +I+AEY+W+ +G + RSK+RTLP LP WN+DGSST QAPG++S+V L P A++ DPFR NI+V+ + + G P N RH Sbjct: 25 QIMAEYVWVDAAG-ETRSKSRTLPEKDYKAEDLPVWNFDGSSTNQAPGDNSDVYLRPCAVYPDPFRGSPNIIVLAECWNAGGTPNKFNFRH 114 HSP 2 Score: 33.113 bits (74), Expect = 9.907e-22 Identity = 12/17 (70.59%), Postives = 15/17 (88.24%), Query Frame = 3 Query: 459 EEPWYGIEQEYTLLHXD 509 +EPW+G+EQEYTLL D Sbjct: 126 DEPWFGLEQEYTLLGPD 142
BLAST of FC930940 vs. ExPASy Swiss-Prot
Match: GLNA_CRYNE (Glutamine synthetase OS=Cryptococcus neoformans GN=GLN1 PE=2 SV=2) HSP 1 Score: 92.8189 bits (229), Expect = 1.289e-21 Identity = 47/90 (52.22%), Postives = 59/90 (65.56%), Query Frame = 2 Query: 146 KIIAEYIWIGGSGMDMRSKARTLPGPVSDPSKLPKWNYDGSSTGQAPGEDSEVILYPQAIFKDPFRRGNNILVMCDAYTPAGEPIPTNKR 415 ++ AEYIWI G +RSK TL S + L +WN+DGSST QAP ++S+V L P AIFKDPFR G NILV+C+ Y G P +N R Sbjct: 24 RVQAEYIWIDAEG-GIRSKTMTLDKAPSSVADLKEWNFDGSSTNQAPADNSDVFLRPVAIFKDPFRGGANILVLCECYDNDGTPNKSNYR 112 HSP 2 Score: 31.187 bits (69), Expect = 1.289e-21 Identity = 11/16 (68.75%), Postives = 13/16 (81.25%), Query Frame = 3 Query: 462 EPWYGIEQEYTLLHXD 509 EPW+G+EQEYTL D Sbjct: 126 EPWFGLEQEYTLFDAD 141
BLAST of FC930940 vs. ExPASy Swiss-Prot
Match: GLNA_NEUCR (Glutamine synthetase OS=Neurospora crassa GN=gln-1 PE=3 SV=1) HSP 1 Score: 100.523 bits (249), Expect = 4.806e-21 Identity = 53/97 (54.64%), Postives = 64/97 (65.98%), Query Frame = 2 Query: 146 KIIAEYIWIGGSGMDMRSKARTLPGPVSD--PSKLPKWNYDGSSTGQAPGEDSEVILYPQAIFKDPFRRGNNILVMCDAYTPAGEPIPTNKRHAPAK 430 ++IAEYIWI G RSK+RTLP S P +LP WN+DGSSTGQAPGE+S+V L P A+F DPFR NILV+ + + G P N RH AK Sbjct: 25 QLIAEYIWIDSEG-GTRSKSRTLPEKESQYLPEELPIWNFDGSSTGQAPGENSDVYLKPVAVFPDPFRGSPNILVLSECWNADGTPNKFNHRHEAAK 120
BLAST of FC930940 vs. ExPASy Swiss-Prot
Match: GLNA_BOVIN (Glutamine synthetase OS=Bos taurus GN=GLUL PE=2 SV=4) HSP 1 Score: 91.6633 bits (226), Expect = 6.241e-21 Identity = 43/92 (46.74%), Postives = 59/92 (64.13%), Query Frame = 2 Query: 143 DKIIAEYIWIGGSGMDMRSKARTLPGPVSDPSKLPKWNYDGSSTGQAPGEDSEVILYPQAIFKDPFRRGNNILVMCDAYTPAGEPIPTNKRH 418 DK+ A YIWI G+G +R K RTL +LP+WN+DGSST Q+ G +S++ L P A+F+DPFR+ N LV C+ + +P TN RH Sbjct: 24 DKVQAMYIWIDGTGEGLRCKTRTLDSEPKCIEELPEWNFDGSSTFQSEGSNSDMYLVPAAMFRDPFRKDPNKLVFCEVFKYNRKPAETNLRH 115 HSP 2 Score: 30.0314 bits (66), Expect = 6.241e-21 Identity = 10/17 (58.82%), Postives = 14/17 (82.35%), Query Frame = 3 Query: 459 EEPWYGIEQEYTLLHXD 509 + PW+G+EQEYTL+ D Sbjct: 127 QRPWFGMEQEYTLMGTD 143
BLAST of FC930940 vs. ExPASy Swiss-Prot
Match: GLNA_CANFA (Glutamine synthetase OS=Canis familiaris GN=GLUL PE=1 SV=3) HSP 1 Score: 91.2781 bits (225), Expect = 8.118e-21 Identity = 42/92 (45.65%), Postives = 59/92 (64.13%), Query Frame = 2 Query: 143 DKIIAEYIWIGGSGMDMRSKARTLPGPVSDPSKLPKWNYDGSSTGQAPGEDSEVILYPQAIFKDPFRRGNNILVMCDAYTPAGEPIPTNKRH 418 +K+ A YIWI G+G +R K RTL +LP+WN+DGSST Q+ G +S++ L P A+F+DPFR+ N LV C+ + +P TN RH Sbjct: 24 EKVQAMYIWIDGTGEGLRCKTRTLDSEPKGVEELPEWNFDGSSTFQSEGSNSDMYLVPAAMFRDPFRKDPNKLVFCEVFKYNRKPAETNLRH 115 HSP 2 Score: 30.0314 bits (66), Expect = 8.118e-21 Identity = 10/17 (58.82%), Postives = 14/17 (82.35%), Query Frame = 3 Query: 459 EEPWYGIEQEYTLLHXD 509 + PW+G+EQEYTL+ D Sbjct: 127 QHPWFGMEQEYTLMGTD 143
BLAST of FC930940 vs. ExPASy Swiss-Prot
Match: GLNA_YARLI (Glutamine synthetase OS=Yarrowia lipolytica GN=GLN1 PE=3 SV=1) HSP 1 Score: 96.2857 bits (238), Expect = 8.122e-21 Identity = 48/110 (43.64%), Postives = 68/110 (61.82%), Query Frame = 2 Query: 149 IIAEYIWIGGSGMDMRSKARTLPGPVSDPSKLPKWNYDGSSTGQAPGEDSEVILYPQAIFKDPFRRGNNILVMCDAYTPAGEPIPTNKRHAPAKNFQPFSSCG*RTMVWY 478 ++AEYIWI ++RSK +TL + LP+WN+DGSST QAPG DS++ L P AI+ DPFRRG+NI+V+ + + G P N RH AK S + ++W+ Sbjct: 15 VLAEYIWIDAH-FNIRSKCKTLDKKPTSIEDLPEWNFDGSSTDQAPGHDSDIYLRPAAIYPDPFRRGDNIIVLAECWNNDGTPNKFNHRHECAK----LMSAHEKEVIWF 119 HSP 2 Score: 25.0238 bits (53), Expect = 8.122e-21 Identity = 8/10 (80.00%), Postives = 10/10 (100.00%), Query Frame = 3 Query: 468 WYGIEQEYTL 497 W+GIEQEYT+ Sbjct: 118 WFGIEQEYTM 127
BLAST of FC930940 vs. ExPASy Swiss-Prot
Match: GLNA_RAT (Glutamine synthetase OS=Rattus norvegicus GN=Glul PE=1 SV=3) HSP 1 Score: 89.7373 bits (221), Expect = 1.056e-20 Identity = 42/93 (45.16%), Postives = 60/93 (64.52%), Query Frame = 2 Query: 143 DKIIAEYIWIGGSGMDMRSKARTLPGPVSDPSKLPKWNYDGSSTGQAPGEDSEVILYPQAIFKDPFRRGNNILVMCDAYTPAGEPIPTNKRHA 421 +KI YIW+ G+G +R K RTL +LP+WN+DGSST Q+ G +S++ L+P A+F+DPFRR N LV C+ + +P TN RH+ Sbjct: 24 EKIQLMYIWVDGTGEGLRCKTRTLDCDPKCVEELPEWNFDGSSTFQSEGSNSDMYLHPVAMFRDPFRRDPNKLVFCEVFKYNRKPAETNLRHS 116 HSP 2 Score: 31.187 bits (69), Expect = 1.056e-20 Identity = 11/20 (55.00%), Postives = 16/20 (80.00%), Query Frame = 3 Query: 450 VVAEEPWYGIEQEYTLLHXD 509 V ++ PW+G+EQEYTL+ D Sbjct: 124 VSSQHPWFGMEQEYTLMGTD 143
BLAST of FC930940 vs. ExPASy Swiss-Prot
Match: GLNA_MOUSE (Glutamine synthetase OS=Mus musculus GN=Glul PE=1 SV=6) HSP 1 Score: 90.5077 bits (223), Expect = 1.374e-20 Identity = 41/92 (44.57%), Postives = 61/92 (66.30%), Query Frame = 2 Query: 143 DKIIAEYIWIGGSGMDMRSKARTLPGPVSDPSKLPKWNYDGSSTGQAPGEDSEVILYPQAIFKDPFRRGNNILVMCDAYTPAGEPIPTNKRH 418 +K+ A YIW+ G+G +R K RTL +LP+WN+DGSST Q+ G +S++ L+P A+F+DPFR+ N LV+C+ + +P TN RH Sbjct: 24 EKVQAMYIWVDGTGEGLRCKTRTLDCEPKCVEELPEWNFDGSSTFQSEGSNSDMYLHPVAMFRDPFRKDPNKLVLCEVFKYNRKPAETNLRH 115 HSP 2 Score: 30.0314 bits (66), Expect = 1.374e-20 Identity = 10/17 (58.82%), Postives = 14/17 (82.35%), Query Frame = 3 Query: 459 EEPWYGIEQEYTLLHXD 509 + PW+G+EQEYTL+ D Sbjct: 127 QHPWFGMEQEYTLMGTD 143
BLAST of FC930940 vs. ExPASy Swiss-Prot
Match: GLNA_HUMAN (Glutamine synthetase OS=Homo sapiens GN=GLUL PE=1 SV=4) HSP 1 Score: 90.5077 bits (223), Expect = 1.374e-20 Identity = 42/92 (45.65%), Postives = 59/92 (64.13%), Query Frame = 2 Query: 143 DKIIAEYIWIGGSGMDMRSKARTLPGPVSDPSKLPKWNYDGSSTGQAPGEDSEVILYPQAIFKDPFRRGNNILVMCDAYTPAGEPIPTNKRH 418 +K+ A YIWI G+G +R K RTL +LP+WN+DGSST Q+ G +S++ L P A+F+DPFR+ N LV+C+ + P TN RH Sbjct: 24 EKVQAMYIWIDGTGEGLRCKTRTLDSEPKCVEELPEWNFDGSSTLQSEGSNSDMYLVPAAMFRDPFRKDPNKLVLCEVFKYNRRPAETNLRH 115 HSP 2 Score: 30.0314 bits (66), Expect = 1.374e-20 Identity = 10/17 (58.82%), Postives = 14/17 (82.35%), Query Frame = 3 Query: 459 EEPWYGIEQEYTLLHXD 509 + PW+G+EQEYTL+ D Sbjct: 127 QHPWFGMEQEYTLMGTD 143 The following BLAST results are available for this feature:
BLAST of FC930940 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 84
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >FC930940 ID=FC930940; Name=FC930940; organism=Citrus clementina; type=EST; length=518bpback to top |