FC930944
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC930944 vs. ExPASy Swiss-Prot
Match: SUCD_RICPR (Succinyl-CoA ligase [ADP-forming] subunit alpha OS=Rickettsia prowazekii GN=sucD PE=3 SV=1) HSP 1 Score: 86.6557 bits (213), Expect = 1.278e-16 Identity = 52/106 (49.06%), Postives = 65/106 (61.32%), Query Frame = 2 Query: 353 GGWRDAEEGWTEHLGLPVFNSVAEAKAETKANASVIYVPPPFXXXXXXXXXXXXLDLVVCITEGIPQHDMVRVKAALNRQSKTRLIGPTALVSSNLEKCRLALCLG 670 GG + G T HL LPV+N+V EAKA+T ANASVIYVPP F +++VVCITEGIP DM++VK AL SKTRLIGP +C++ + G Sbjct: 37 GGVTPGKGGHT-HLNLPVYNTVHEAKAKTGANASVIYVPPGFAADSILEAIDAKIEVVVCITEGIPVLDMIKVKRAL-IGSKTRLIGPNCPGVITPGECKIGIMPG 140 HSP 2 Score: 72.0182 bits (175), Expect = 3.229e-12 Identity = 31/44 (70.45%), Postives = 36/44 (81.82%), Query Frame = 3 Query: 252 AVFVDKNTRVICQGITGKNGTFHTEQAIEYGTKMVGGVTPKKGG 383 A+ ++K T+VICQG TG GTFH+EQAI YGT MVGGVTP KGG Sbjct: 2 AILINKKTKVICQGFTGSQGTFHSEQAIAYGTNMVGGVTPGKGG 45
BLAST of FC930944 vs. ExPASy Swiss-Prot
Match: SUCD_RICFE (Succinyl-CoA ligase [ADP-forming] subunit alpha OS=Rickettsia felis GN=sucD PE=3 SV=1) HSP 1 Score: 86.6557 bits (213), Expect = 1.278e-16 Identity = 53/106 (50.00%), Postives = 65/106 (61.32%), Query Frame = 2 Query: 353 GGWRDAEEGWTEHLGLPVFNSVAEAKAETKANASVIYVPPPFXXXXXXXXXXXXLDLVVCITEGIPQHDMVRVKAALNRQSKTRLIGPTALVSSNLEKCRLALCLG 670 GG + G T HL LPV+N+V EAKA+T ANASVIYVPP F +++VVCITEGIP DMV+VK AL SKTRLIGP +C++ + G Sbjct: 37 GGVTPGKGGHT-HLDLPVYNTVHEAKAKTGANASVIYVPPGFAADSILEAIDAEIEVVVCITEGIPVLDMVKVKRAL-VGSKTRLIGPNCPGVITPGECKIGIMPG 140 HSP 2 Score: 72.7886 bits (177), Expect = 1.893e-12 Identity = 34/55 (61.82%), Postives = 42/55 (76.36%), Query Frame = 3 Query: 252 AVFVDKNTRVICQGITGKNGTFHTEQAIEYGTKMVGGVTPKKGGLSTWDF-LYST 413 A+ ++K T+VICQG TG GTFH+EQAI YGT MVGGVTP KGG + D +Y+T Sbjct: 2 AILINKKTKVICQGFTGSQGTFHSEQAIAYGTNMVGGVTPGKGGHTHLDLPVYNT 56
BLAST of FC930944 vs. ExPASy Swiss-Prot
Match: SUCD_RICCN (Succinyl-CoA ligase [ADP-forming] subunit alpha OS=Rickettsia conorii GN=sucD PE=3 SV=1) HSP 1 Score: 86.6557 bits (213), Expect = 1.278e-16 Identity = 53/106 (50.00%), Postives = 65/106 (61.32%), Query Frame = 2 Query: 353 GGWRDAEEGWTEHLGLPVFNSVAEAKAETKANASVIYVPPPFXXXXXXXXXXXXLDLVVCITEGIPQHDMVRVKAALNRQSKTRLIGPTALVSSNLEKCRLALCLG 670 GG + G T HL LPV+N+V EAKA+T ANASVIYVPP F +++VVCITEGIP DMV+VK AL SKTRLIGP +C++ + G Sbjct: 37 GGVTPGKGGHT-HLDLPVYNTVHEAKAKTGANASVIYVPPGFAADSILEAIDAEIEVVVCITEGIPVLDMVKVKRAL-VGSKTRLIGPNCPGVITPGECKIGIMPG 140 HSP 2 Score: 71.633 bits (174), Expect = 4.217e-12 Identity = 34/55 (61.82%), Postives = 42/55 (76.36%), Query Frame = 3 Query: 252 AVFVDKNTRVICQGITGKNGTFHTEQAIEYGTKMVGGVTPKKGGLSTWDF-LYST 413 A+ ++K T+VICQG TG GTFH+EQAI YGT MVGGVTP KGG + D +Y+T Sbjct: 2 AILINKKTQVICQGFTGLQGTFHSEQAIAYGTNMVGGVTPGKGGHTHLDLPVYNT 56
BLAST of FC930944 vs. ExPASy Swiss-Prot
Match: SUCA_NEUCR (Probable succinyl-CoA ligase [GDP-forming] subunit alpha, mitochondrial OS=Neurospora crassa GN=8D4.130 PE=3 SV=1) HSP 1 Score: 86.6557 bits (213), Expect = 1.278e-16 Identity = 47/106 (44.34%), Postives = 61/106 (57.55%), Query Frame = 2 Query: 353 GGWRDAEEGWTEHLGLPVFNSVAEAKAETKANASVIYVPPPFXXXXXXXXXXXXLDLVVCITEGIPQHDMVRVKAALNRQSKTRLIGPTALVSSNLEKCRLALCLG 670 GG + G T HL PVF++V+EA ET A A+ I+VPPP + L VCITEGIPQHDMVR+ + L QSKTRL+GP +C++ + G Sbjct: 71 GGTNPKKAGQT-HLDRPVFSNVSEAVKETGATATAIFVPPPLAAAGIEEALQAEIPLAVCITEGIPQHDMVRITSMLKTQSKTRLVGPNCPGIIAPGQCKIGIMPG 175
BLAST of FC930944 vs. ExPASy Swiss-Prot
Match: SUCA_YEAST (Succinyl-CoA ligase [ADP-forming] subunit alpha, mitochondrial OS=Saccharomyces cerevisiae GN=LSC1 PE=1 SV=1) HSP 1 Score: 81.6481 bits (200), Expect = 4.111e-15 Identity = 44/88 (50.00%), Postives = 51/88 (57.95%), Query Frame = 2 Query: 353 GGWRDAEEGWTEHLGLPVFNSVAEAKAETKANASVIYVPPPFXXXXXXXXXXXXLDLVVCITEGIPQHDMVRVKAALNRQSKTRLIGP 616 GG + G T HLG PVF SV +A ET A AS I+VPPP + L VCITEGIPQHDM+ + L Q KTRL+GP Sbjct: 65 GGTNPKKAGQT-HLGQPVFASVKDAIKETGATASAIFVPPPIAAAAIKESIEAEIPLAVCITEGIPQHDMLYIAEMLQTQDKTRLVGP 151 The following BLAST results are available for this feature:
BLAST of FC930944 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 45
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Sequences
The
following sequences are available for this feature:
EST sequence >FC930944 ID=FC930944; Name=FC930944; organism=Citrus clementina; type=EST; length=682bpback to top |