FC930952

Overview
NameFC930952
Unique NameFC930952
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length718
Libraries
Library NameType
PostHarvP1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC930952 vs. ExPASy Swiss-Prot
Match: CDPKB_ARATH (Calcium-dependent protein kinase 11 OS=Arabidopsis thaliana GN=CPK11 PE=1 SV=1)

HSP 1 Score: 345.51 bits (885), Expect = 1.667e-94
Identity = 167/239 (69.87%), Postives = 199/239 (83.26%), Query Frame = 1
Query:    1 LYILPSGVPPFWAETQQGIFDAVLKGHIDFESDPWPLISDSAKDLIRKMLCSQPSERLTAHEVLCHPWICENGVAPDRSLDPAVLSRLKQFSAMNKLKKMALRVIAESLSEEEIAGLKEMFKAMDTDNSGAITFDELKAGLRRYGSTLKDTEIRDLMDAADVDNSGTIDYGEFIAATVHLNKLEREEHLVAAFQYFDKDGSGYITVDELQQACAEHNMTDVLL*DIIREVLIRYDGRID 717
            LYIL SGVPPFWAET+ GIF  +L+G +DF+SDPWP IS++AKDLI KML   P +R++AHE LCHPWI +   APD+ LDPAVLSRLKQFS MNK+KKMALRVIAE LSEEEI GLKE+FK +DTDNSG ITF+ELKAGL+R GS L ++EI+ LMDAAD+DNSGTIDYGEF+AAT+H+NK+EREE LVAAF  FDKDGSGYIT+DELQ AC E  + D  L D+I+E+ +  DG+ID
Sbjct:  216 LYILLSGVPPFWAETESGIFRQILQGKLDFKSDPWPTISEAAKDLIYKMLERSPKKRISAHEALCHPWIVDEQAAPDKPLDPAVLSRLKQFSQMNKIKKMALRVIAERLSEEEIGGLKELFKMIDTDNSGTITFEELKAGLKRVGSELMESEIKSLMDAADIDNSGTIDYGEFLAATLHMNKMEREEILVAAFSDFDKDGSGYITIDELQSACTEFGLCDTPLDDMIKEIDLDNDGKID 454          
BLAST of FC930952 vs. ExPASy Swiss-Prot
Match: CDPKK_ARATH (Calcium-dependent protein kinase 20 OS=Arabidopsis thaliana GN=CPK20 PE=2 SV=1)

HSP 1 Score: 339.347 bits (869), Expect = 1.195e-92
Identity = 168/239 (70.29%), Postives = 197/239 (82.43%), Query Frame = 1
Query:    1 LYILPSGVPPFWAETQQGIFDAVLKGHIDFESDPWPLISDSAKDLIRKMLCSQPSERLTAHEVLCHPWICENGVAPDRSLDPAVLSRLKQFSAMNKLKKMALRVIAESLSEEEIAGLKEMFKAMDTDNSGAITFDELKAGLRRYGSTLKDTEIRDLMDAADVDNSGTIDYGEFIAATVHLNKLEREEHLVAAFQYFDKDGSGYITVDELQQACAEHNMTDVLL*DIIREVLIRYDGRID 717
            +YIL SGVPPFW ET+QGIF+ VLKG +DF S+PWP +S+SAKDL+R+ML   P +R+T HEVLCHPW   +GVA D+ LD AVLSRL+QFSAMNKLKK+A++VIAESLSEEEIAGLKEMFK +DTDNSG IT +ELK GL R G+ LKD+EI  LM AAD+DNSGTIDYGEFIAA VHLNK+E+E+HL  AF YFD+DGSGYIT DELQQAC +  + DV L DI+REV    DGRID
Sbjct:  324 IYILLSGVPPFWDETEQGIFEQVLKGDLDFISEPWPSVSESAKDLVRRMLIRDPKKRMTTHEVLCHPWARVDGVALDKPLDSAVLSRLQQFSAMNKLKKIAIKVIAESLSEEEIAGLKEMFKMIDTDNSGHITLEELKKGLDRVGADLKDSEILGLMQAADIDNSGTIDYGEFIAAMVHLNKIEKEDHLFTAFSYFDQDGSGYITRDELQQACKQFGLADVHLDDILREVDKDNDGRID 562          
BLAST of FC930952 vs. ExPASy Swiss-Prot
Match: CDPK1_ORYSJ (Calcium-dependent protein kinase isoform 1 OS=Oryza sativa subsp. japonica GN=SPK PE=2 SV=2)

HSP 1 Score: 325.865 bits (834), Expect = 1.367e-88
Identity = 163/239 (68.20%), Postives = 196/239 (82.01%), Query Frame = 1
Query:    1 LYILPSGVPPFWAETQQGIFDAVLKGHIDFESDPWPLISDSAKDLIRKMLCSQPSERLTAHEVLCHPWICENGVAPDRSLDPAVLSRLKQFSAMNKLKKMALRVIAESLSEEEIAGLKEMFKAMDTDNSGAITFDELKAGLRRYGSTLKDTEIRDLMDAADVDNSGTIDYGEFIAATVHLNKLEREEHLVAAFQYFDKDGSGYITVDELQQACAEHNMTDVLL*DIIREVLIRYDGRID 717
            LY+L +GVPPFWA+TQ GI++ VL G IDF+S+ WP ISDSAKDLI+KMLC  PSERL AHEVL HPWIC+NGVA +R+LDP+VL RLKQFSAMN+LKK++L++IAE LSEEEI GL+EMFKAMDT N   +TF ELK GL+RY S  KDTEI DLM+AAD D + TI++ EFIAA V LNK+ERE+HL+AAF YFDKDGSG+ITVD+LQ+AC E NM D  L ++I EV    DG+ID
Sbjct:  263 LYVLLTGVPPFWADTQSGIYEKVLDGRIDFKSNRWPRISDSAKDLIKKMLCPYPSERLKAHEVLKHPWICDNGVATNRALDPSVLPRLKQFSAMNRLKKLSLQIIAERLSEEEIVGLREMFKAMDTKNRSVVTFGELK-GLKRYSSVFKDTEINDLMEAAD-DTTSTINWEEFIAAAVSLNKIEREKHLMAAFTYFDKDGSGFITVDKLQKACMERNMEDTFLEEMILEVDQNNDGQID 499          
BLAST of FC930952 vs. ExPASy Swiss-Prot
Match: CDPKC_ARATH (Calcium-dependent protein kinase 12 OS=Arabidopsis thaliana GN=CPK12 PE=1 SV=1)

HSP 1 Score: 321.242 bits (822), Expect = 3.366e-87
Identity = 159/239 (66.53%), Postives = 197/239 (82.43%), Query Frame = 1
Query:    1 LYILPSGVPPFWAETQQGIFDAVLKGHIDFESDPWPLISDSAKDLIRKMLCSQPSERLTAHEVLCHPWICENGVAPDRSLDPAVLSRLKQFSAMNKLKKMALRVIAESLSEEEIAGLKEMFKAMDTDNSGAITFDELKAGLRRYGSTLKDTEIRDLMDAADVDNSGTIDYGEFIAATVHLNKLEREEHLVAAFQYFDKDGSGYITVDELQQACAEHNMTDVLL*DIIREVLIRYDGRID 717
            LYIL  G PPFWAE++ GIF  +L+G ++FE +PWP IS+SAKDLI+KML S P +RLTAH+VLCHPWI ++ VAPD+ LD AV+SRLK+FSAMNKLKKMALRVIAE LSEEEI GLKE+FK +DTD SG ITF+ELK  +RR GS L ++EI++L+ AADVD SGTIDYGEF+AAT+HLNKLEREE+LVAAF +FDKD SGYIT++ELQQA  E  + D  L ++I+++    DG+ID
Sbjct:  212 LYILLCGFPPFWAESEIGIFRKILQGKLEFEINPWPSISESAKDLIKKMLESNPKKRLTAHQVLCHPWIVDDKVAPDKPLDCAVVSRLKKFSAMNKLKKMALRVIAERLSEEEIGGLKELFKMIDTDKSGTITFEELKDSMRRVGSELMESEIQELLRAADVDESGTIDYGEFLAATIHLNKLEREENLVAAFSFFDKDASGYITIEELQQAWKEFGINDSNLDEMIKDIDQDNDGQID 450          
BLAST of FC930952 vs. ExPASy Swiss-Prot
Match: CDPK2_ORYSJ (Calcium-dependent protein kinase isoform 2 OS=Oryza sativa subsp. japonica GN=CPK2 PE=2 SV=2)

HSP 1 Score: 307.76 bits (787), Expect = 3.852e-83
Identity = 155/240 (64.58%), Postives = 190/240 (79.17%), Query Frame = 1
Query:    1 LYILPSGVPPFWAETQQGIFDAVLKGHIDFESDPWPLISDSAKDLIRKMLCSQPSERLTAHEVLCHPWICENGVAPDRSLDPAVLSRLKQFSAMNKLKKMALRVIAESLSEEEIAGLKEMFKAMDTDNSGAITFDELKAGLRRYGSTLKDTEIRDLMDAADVDNSGTIDYGEFIAATVHLNKLEREEHLVAAFQYFDKDGSGYITVDELQQACAEHNMTDV-LL*DIIREVLIRYDGRID 717
            LYIL SGVPPFWAET++GIFDA+L+G IDFES PWP IS+SAKDL+RKML   P +R+T+ +VL HPW+  +G A D+ +D AVLSR+KQF AMNKLKKMAL+VIA +L+EEEI GLK+MF  MDTDNSG IT++ELKAGL + GS L + E++ LM+AADVD +G+IDY EFI AT+H +KLER+EHL  AFQYFDKD SG+IT DEL+ A  EH M D   + DII EV    DGRI+
Sbjct:  275 LYILLSGVPPFWAETEKGIFDAILQGEIDFESQPWPSISESAKDLVRKMLTQDPKKRITSAQVLQHPWL-RDGEASDKPIDSAVLSRMKQFRAMNKLKKMALKVIASNLNEEEIKGLKQMFTNMDTDNSGTITYEELKAGLAKLGSKLSEAEVKQLMEAADVDGNGSIDYVEFITATMHRHKLERDEHLFKAFQYFDKDNSGFITRDELESALIEHEMGDTSTIKDIISEVDTDNDGRIN 513          
BLAST of FC930952 vs. ExPASy Swiss-Prot
Match: CDPKY_ARATH (Calcium-dependent protein kinase 34 OS=Arabidopsis thaliana GN=CPK34 PE=2 SV=1)

HSP 1 Score: 306.99 bits (785), Expect = 6.570e-83
Identity = 155/240 (64.58%), Postives = 187/240 (77.92%), Query Frame = 1
Query:    1 LYILPSGVPPFWAETQQGIFDAVLKGHIDFESDPWPLISDSAKDLIRKMLCSQPSERLTAHEVLCHPWICENGVAPDRSLDPAVLSRLKQFSAMNKLKKMALRVIAESLSEEEIAGLKEMFKAMDTDNSGAITFDELKAGLRRYGSTLKDTEIRDLMDAADVDNSGTIDYGEFIAATVHLNKLEREEHLVAAFQYFDKDGSGYITVDELQQACAEHNMTDVL-L*DIIREVLIRYDGRID 717
            LYIL  GVPPFWAE++ GIF+A+L G +DF SDPWP+IS  AKDL+RKML S P +RLTA +VL HPWI E+G APD  LD AV+SRLKQF AMN  KK+ALRVIA  LSEEEI GLKEMFK MDTDNSG IT +EL+ GL + G+ L + E++ LM+AAD D +GTIDYGEFIAAT+H+N+L+REEHL +AFQ+FDKD SGYIT +EL+QA  E  M D   + +II EV    DGRI+
Sbjct:  258 LYILLCGVPPFWAESENGIFNAILSGQVDFSSDPWPVISPQAKDLVRKMLNSDPKQRLTAAQVLNHPWIKEDGEAPDVPLDNAVMSRLKQFKAMNNFKKVALRVIAGCLSEEEIMGLKEMFKGMDTDNSGTITLEELRQGLAKQGTRLSEYEVQQLMEAADADGNGTIDYGEFIAATMHINRLDREEHLYSAFQHFDKDNSGYITTEELEQALREFGMNDGRDIKEIISEVDGDNDGRIN 497          
BLAST of FC930952 vs. ExPASy Swiss-Prot
Match: CDPKH_ARATH (Calcium-dependent protein kinase 17 OS=Arabidopsis thaliana GN=CPK17 PE=2 SV=1)

HSP 1 Score: 306.99 bits (785), Expect = 6.570e-83
Identity = 154/240 (64.17%), Postives = 189/240 (78.75%), Query Frame = 1
Query:    1 LYILPSGVPPFWAETQQGIFDAVLKGHIDFESDPWPLISDSAKDLIRKMLCSQPSERLTAHEVLCHPWICENGVAPDRSLDPAVLSRLKQFSAMNKLKKMALRVIAESLSEEEIAGLKEMFKAMDTDNSGAITFDELKAGLRRYGSTLKDTEIRDLMDAADVDNSGTIDYGEFIAATVHLNKLEREEHLVAAFQYFDKDGSGYITVDELQQACAEHNMTDVL-L*DIIREVLIRYDGRID 717
            LYIL  GVPPFWAE++ GIF+A+L+GH+DF SDPWP IS  AKDL++KML S P +RLTA +VL HPWI E+G APD  LD AV+SRLKQF AMN  KK+ALRVIA  LSEEEI GLKEMFK MDTD+SG IT +EL+ GL + G+ L + E++ LM+AAD D +GTIDYGEFIAAT+H+N+L+REEHL +AFQ+FDKD SGYIT++EL+QA  E  M D   + +II EV    DGRI+
Sbjct:  263 LYILLCGVPPFWAESENGIFNAILRGHVDFSSDPWPSISPQAKDLVKKMLNSDPKQRLTAAQVLNHPWIKEDGEAPDVPLDNAVMSRLKQFKAMNNFKKVALRVIAGCLSEEEIMGLKEMFKGMDTDSSGTITLEELRQGLAKQGTRLSEYEVQQLMEAADADGNGTIDYGEFIAATMHINRLDREEHLYSAFQHFDKDNSGYITMEELEQALREFGMNDGRDIKEIISEVDGDNDGRIN 502          
BLAST of FC930952 vs. ExPASy Swiss-Prot
Match: CDPK3_ARATH (Calcium-dependent protein kinase 3 OS=Arabidopsis thaliana GN=CPK3 PE=1 SV=1)

HSP 1 Score: 303.908 bits (777), Expect = 5.562e-82
Identity = 149/240 (62.08%), Postives = 190/240 (79.17%), Query Frame = 1
Query:    1 LYILPSGVPPFWAETQQGIFDAVLKGHIDFESDPWPLISDSAKDLIRKMLCSQPSERLTAHEVLCHPWICENGVAPDRSLDPAVLSRLKQFSAMNKLKKMALRVIAESLSEEEIAGLKEMFKAMDTDNSGAITFDELKAGLRRYGSTLKDTEIRDLMDAADVDNSGTIDYGEFIAATVHLNKLEREEHLVAAFQYFDKDGSGYITVDELQQACAEHNM-TDVLL*DIIREVLIRYDGRID 717
            LYIL SGVPPFW E + GIFDA+L+G +DF +DPWP +SD AKDL+RKML   P +RLTA EVL HPWI E+G A D+ LD AVLSR+KQF AMNKLKKMAL+VIAE+LSEEEI GLKEMFK++DTDN+G +T +EL+ GL + GS + + EIR LM+AAD+D  G+IDY EFI+AT+H+N++ERE+HL  AFQ+FD D SGYIT++EL+ A  ++NM  D  + +II EV    DG+I+
Sbjct:  268 LYILLSGVPPFWGENETGIFDAILQGQLDFSADPWPALSDGAKDLVRKMLKYDPKDRLTAAEVLNHPWIREDGEASDKPLDNAVLSRMKQFRAMNKLKKMALKVIAENLSEEEIIGLKEMFKSLDTDNNGIVTLEELRTGLPKLGSKISEAEIRQLMEAADMDGDGSIDYLEFISATMHMNRIEREDHLYTAFQFFDNDNSGYITMEELELAMKKYNMGDDKSIKEIIAEVDTDRDGKIN 507          
BLAST of FC930952 vs. ExPASy Swiss-Prot
Match: CDPK2_MAIZE (Calcium-dependent protein kinase 2 OS=Zea mays GN=CPK2 PE=2 SV=1)

HSP 1 Score: 302.368 bits (773), Expect = 1.618e-81
Identity = 153/240 (63.75%), Postives = 186/240 (77.50%), Query Frame = 1
Query:    1 LYILPSGVPPFWAETQQGIFDAVLKGHIDFESDPWPLISDSAKDLIRKMLCSQPSERLTAHEVLCHPWICENGVAPDRSLDPAVLSRLKQFSAMNKLKKMALRVIAESLSEEEIAGLKEMFKAMDTDNSGAITFDELKAGLRRYGSTLKDTEIRDLMDAADVDNSGTIDYGEFIAATVHLNKLEREEHLVAAFQYFDKDGSGYITVDELQQACAEHNMTDV-LL*DIIREVLIRYDGRID 717
            LYIL SGVPPFWAE ++GIFDA+L   IDFES PWP IS+SAKDL+RKML   P +RLT+ +VL H W+ E G A D+ +D AVLSR+KQF AMNKLKKMAL+VIA +L+EEEI GLK+MF  MDTDNSG IT++ELKAGL + GS L + E++ LM+AADVD +G+IDY EFI AT+H +KLER+EHL  AFQYFDKD SG+IT DEL+ A  EH M D   + +II EV    DGRI+
Sbjct:  255 LYILLSGVPPFWAEIEKGIFDAILHEEIDFESQPWPSISESAKDLVRKMLTRDPKKRLTSAQVLQHQWLREGGEASDKPIDSAVLSRMKQFRAMNKLKKMALKVIASNLNEEEIKGLKQMFMNMDTDNSGTITYEELKAGLAKLGSKLSEAEVKQLMEAADVDGNGSIDYVEFITATMHRHKLERDEHLFKAFQYFDKDNSGFITRDELESALIEHEMGDTSTIREIISEVDTDNDGRIN 494          
BLAST of FC930952 vs. ExPASy Swiss-Prot
Match: CDPKL_ARATH (Calcium-dependent protein kinase 21 OS=Arabidopsis thaliana GN=CPK21 PE=1 SV=1)

HSP 1 Score: 298.516 bits (763), Expect = 2.337e-80
Identity = 152/240 (63.33%), Postives = 187/240 (77.92%), Query Frame = 1
Query:    1 LYILPSGVPPFWAETQQGIFDAVLKGHIDFESDPWPLISDSAKDLIRKMLCSQPSERLTAHEVLCHPWICENGVAPDRSLDPAVLSRLKQFSAMNKLKKMALRVIAESLSEEEIAGLKEMFKAMDTDNSGAITFDELKAGLRRYGSTLKDTEIRDLMDAADVDNSGTIDYGEFIAATVHLNKLEREEHLVAAFQYFDKDGSGYITVDELQQACAEHNMTD-VLL*DIIREVLIRYDGRID 717
            LYIL SGVPPFWAE ++GIFD V+KG IDF S+PWP IS+SAKDL+RKML   P  R+TA +VL HPWI + G APD+ +D AVLSR+KQF AMNKLKK+AL+VIAESLSEEEI GLK MF  +DTD SG IT++ELK GL R GS L +TE++ LM+AADVD +GTIDY EFI+AT+H  KL+R+EH+  AFQ+FDKD SG+IT DEL+ A  E+ M D   + ++I EV    DGRI+
Sbjct:  270 LYILLSGVPPFWAENEKGIFDEVIKGEIDFVSEPWPSISESAKDLVRKMLTKDPKRRITAAQVLEHPWI-KGGEAPDKPIDSAVLSRMKQFRAMNKLKKLALKVIAESLSEEEIKGLKTMFANIDTDKSGTITYEELKTGLTRLGSRLSETEVKQLMEAADVDGNGTIDYYEFISATMHRYKLDRDEHVYKAFQHFDKDNSGHITRDELESAMKEYGMGDEASIKEVISEVDTDNDGRIN 508          
The following BLAST results are available for this feature:
BLAST of FC930952 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 269
Match NameE-valueIdentityDescription
CDPKB_ARATH1.667e-9469.87Calcium-dependent protein kinase 11 OS=Arabidopsis... [more]
CDPKK_ARATH1.195e-9270.29Calcium-dependent protein kinase 20 OS=Arabidopsis... [more]
CDPK1_ORYSJ1.367e-8868.20Calcium-dependent protein kinase isoform 1 OS=Oryz... [more]
CDPKC_ARATH3.366e-8766.53Calcium-dependent protein kinase 12 OS=Arabidopsis... [more]
CDPK2_ORYSJ3.852e-8364.58Calcium-dependent protein kinase isoform 2 OS=Oryz... [more]
CDPKY_ARATH6.570e-8364.58Calcium-dependent protein kinase 34 OS=Arabidopsis... [more]
CDPKH_ARATH6.570e-8364.17Calcium-dependent protein kinase 17 OS=Arabidopsis... [more]
CDPK3_ARATH5.562e-8262.08Calcium-dependent protein kinase 3 OS=Arabidopsis ... [more]
CDPK2_MAIZE1.618e-8163.75Calcium-dependent protein kinase 2 OS=Zea mays GN=... [more]
CDPKL_ARATH2.337e-8063.33Calcium-dependent protein kinase 21 OS=Arabidopsis... [more]

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Properties
Property NameValue
Genbank descriptionC34110G09EF PostHarvP1 Citrus clementina cDNA clone C34110G09, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC930952 ID=FC930952; Name=FC930952; organism=Citrus clementina; type=EST; length=718bp
CTGTATATATTGCCTAGTGGAGTGCCACCATTTTGGGCAGAAACACAACA
GGGAATATTTGATGCGGTGTTGAAGGGACACATTGACTTTGAGTCTGACC
CTTGGCCACTAATATCCGACAGCGCAAAAGACCTTATTCGGAAGATGTTA
TGCTCTCAACCATCAGAACGCCTGACTGCTCATGAAGTTTTATGTCATCC
CTGGATCTGTGAAAATGGAGTTGCTCCTGATAGGTCCCTTGATCCAGCTG
TACTTTCTCGTCTCAAACAATTCTCTGCAATGAATAAATTGAAAAAGATG
GCTTTACGGGTTATAGCTGAAAGCCTTTCTGAAGAGGAGATTGCTGGTTT
AAAGGAAATGTTCAAGGCCATGGATACTGACAATAGTGGTGCAATTACAT
TTGATGAACTCAAAGCTGGTTTACGAAGATATGGCTCTACCTTGAAGGAT
ACAGAGATACGTGATCTTATGGATGCGGCTGATGTGGACAATAGTGGAAC
TATTGATTATGGAGAATTTATAGCTGCAACTGTTCACCTCAATAAATTAG
AACGTGAGGAACATCTTGTTGCTGCATTCCAGTACTTCGACAAGGATGGA
AGTGGTTATATTACGGTTGATGAACTTCAGCAAGCATGTGCTGAACATAA
CATGACAGATGTTTTACTTTGAGATATAATCAGAGAAGTTTTGATCAGAT
ATGATGGAAGAATTGACT
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