FC930952

Overview
NameFC930952
Unique NameFC930952
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length718
Libraries
Library NameType
PostHarvP1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC930952 vs. ExPASy Swiss-Prot
Match: CDPKD_ARATH (Calcium-dependent protein kinase 13 OS=Arabidopsis thaliana GN=CPK13 PE=1 SV=2)

HSP 1 Score: 244.973 bits (624), Expect = 3.066e-64
Identity = 126/240 (52.50%), Postives = 164/240 (68.33%), Query Frame = 1
Query:    1 LYILPSGVPPFWAETQQGIFDAVLKGHIDFESDPWPLISDSAKDLIRKMLCSQPSERLTAHEVLCHPWICENGVAPDRSLDPAVLSRLKQFSAMNKLKKMALRVIAESLSEEEIAGLKEMFKAMDTDNSGAITFDELKAGLRRYGSTLKDTEIRDLMDAADVDNSGTIDYGEFIAATVHLNKLEREEHLVAAFQYFDKDGSGYITVDELQQACAEHNMTDV--LL*DIIREVLIRYDGRI 714
            LYIL  GVPPFWAE++QG+  A+L+G IDF+ +PWP IS++AK+L+R+ML   P  RLTA +VL HPWI     AP+  L   V SRLKQFS MN+ K+ ALRVIAE LS EE+  +K MF  MDTDN G ++ +ELKAGLR + + L ++E++ L++A D    GT+DYGEF+A ++HL K+  +EHL  AF YFDKDG+GYI   EL  A  E    D   +  DI +EV    DGRI
Sbjct:  244 LYILLCGVPPFWAESEQGVAQAILRGVIDFKREPWPNISETAKNLVRQMLEPDPKRRLTAKQVLEHPWIQNAKKAPNVPLGDVVKSRLKQFSVMNRFKRKALRVIAEFLSTEEVEDIKVMFNKMDTDNDGIVSIEELKAGLRDFSTQLAESEVQMLIEAVDTKGKGTLDYGEFVAVSLHLQKVANDEHLRKAFSYFDKDGNGYILPQELCDALKEDGGDDCVDVANDIFQEVDTDKDGRI 483          
BLAST of FC930952 vs. ExPASy Swiss-Prot
Match: CDPKU_ARATH (Calcium-dependent protein kinase 30 OS=Arabidopsis thaliana GN=CPK30 PE=1 SV=1)

HSP 1 Score: 244.202 bits (622), Expect = 5.230e-64
Identity = 126/241 (52.28%), Postives = 170/241 (70.54%), Query Frame = 1
Query:    1 LYILPSGVPPFWAETQQGIFDAVLKGHIDFESDPWPLISDSAKDLIRKMLCSQPSERLTAHEVLCHPWICENGVAPDRSLDPAVLSRLKQFSAMNKLKKMALRVIAESLSEEEIAGLKEMFKAMDTDNSGAITFDELKAGLRRYGSTLKDTEIRDLMDAADVDNSGTIDYGEFIAATVHLNKLEREEHLVAAFQYFDKDGSGYITVDELQQACAEH--NMTDVLL*DIIREVLIRYDGRID 717
            LYIL  GVPPFWAET+QG+  A+L+G +DF+ DPW  IS+SAK L+++ML    ++RLTA +VL HPWI     AP+  L   V SRLKQFS MN+LKK ALRVIAE LS +E+  ++ MF  MD DN G I++ EL+AGLR+ GS L + EI+ LM+ ADV+ +G +DYGEF+A  +HL K+E +EH   AF +FDKDGSGYI  +EL++A  +      + ++ DI+REV    DG+I+
Sbjct:  249 LYILLCGVPPFWAETEQGVALAILRGVLDFKRDPWSQISESAKSLVKQMLEPDSTKRLTAQQVLDHPWIQNAKKAPNVPLGDIVRSRLKQFSMMNRLKKKALRVIAEHLSIQEVEVIRNMFTLMDDDNDGKISYLELRAGLRKVGSQLGEPEIKLLMEVADVNGNGCLDYGEFVAVIIHLQKMENDEHFRQAFMFFDKDGSGYIESEELREALTDELGEPDNSVIIDIMREVDTDKDGKIN 489          
BLAST of FC930952 vs. ExPASy Swiss-Prot
Match: CDPKW_ARATH (Calcium-dependent protein kinase 32 OS=Arabidopsis thaliana GN=CPK32 PE=1 SV=1)

HSP 1 Score: 239.58 bits (610), Expect = 1.288e-62
Identity = 122/239 (51.05%), Postives = 164/239 (68.62%), Query Frame = 1
Query:    1 LYILPSGVPPFWAETQQGIFDAVLKGHIDFESDPWPLISDSAKDLIRKMLCSQPSERLTAHEVLCHPWICENGVAPDRSLDPAVLSRLKQFSAMNKLKKMALRVIAESLSEEEIAGLKEMFKAMDTDNSGAITFDELKAGLRRYGSTLKDTEIRDLMDAADVDNSGTIDYGEFIAATVHLNKLEREEHLVAAFQYFDKDGSGYITVDELQQACAEHNMTDVLL*D-IIREVLIRYDGRI 714
            LYIL  GVPPFWAET+QG+  A+++  +DF  DPWP +S++AKDLIRKML      RLTA +VL HPW+     AP+ SL   V +RLKQF+ MNKLKK ALRVIAE LS+EE +G++E F+ MDT   G I  DELK GL++ G  +   +++ LMDA D+D  G +D  EFIA +VHL K+  +EHL  AF +FD++ +GYI ++EL++A ++   T   + D IIR+V    DGRI
Sbjct:  253 LYILLCGVPPFWAETEQGVAQAIIRSVLDFRRDPWPKVSENAKDLIRKMLDPDQKRRLTAQQVLDHPWLQNAKTAPNVSLGETVRARLKQFTVMNKLKKRALRVIAEHLSDEEASGIREGFQIMDTSQRGKINIDELKIGLQKLGHAIPQDDLQILMDAGDIDRDGYLDCDEFIAISVHLRKMGNDEHLKKAFAFFDQNNNGYIEIEELREALSDELGTSEEVVDAIIRDVDTDKDGRI 491          
BLAST of FC930952 vs. ExPASy Swiss-Prot
Match: CDPK8_ARATH (Calcium-dependent protein kinase 8 OS=Arabidopsis thaliana GN=CPK8 PE=1 SV=1)

HSP 1 Score: 238.81 bits (608), Expect = 2.197e-62
Identity = 123/241 (51.04%), Postives = 171/241 (70.95%), Query Frame = 1
Query:    1 LYILPSGVPPFWAETQQGIFDAVLKGHIDFESDPWPLISDSAKDLIRKMLCSQPSERLTAHEVLCHPWICENGVAPDRSLDPAVLSRLKQFSAMNKLKKMALRVIAESLSEEEIAGLKEMFKAMDTDNSGAITFDELKAGLRRYG-STLKDTEIRDLMDAADVDNSGTIDYGEFIAATVHLNKLEREEHLVAAFQYFDKDGSGYITVDELQQACAEH--NMTDVLL*DIIREVLIRYDGRI 714
            LYIL  GVPPFWAET+QG+  A+++  IDF+ DPWP +S++AKDL+RKML   P +RL+A +VL H WI     AP+ SL   V +RLKQFS MNKLKK ALRVIAE LS EE+AG+KE F+ MD+  +G I  +ELK GL + G   + DT+++ LM+AADVD  GT++YGEF+A +VHL K+  +EHL  AF +FD++ S YI ++EL++A  +     ++ ++  I+++V    DGRI
Sbjct:  247 LYILLCGVPPFWAETEQGVAQAIIRSVIDFKRDPWPRVSETAKDLVRKMLEPDPKKRLSAAQVLEHSWIQNAKKAPNVSLGETVKARLKQFSVMNKLKKRALRVIAEHLSVEEVAGIKEAFEMMDSKKTGKINLEELKFGLHKLGQQQIPDTDLQILMEAADVDGDGTLNYGEFVAVSVHLKKMANDEHLHKAFSFFDQNQSDYIEIEELREALNDEVDTNSEEVVAAIMQDVDTDKDGRI 487          
BLAST of FC930952 vs. ExPASy Swiss-Prot
Match: CDPKE_ARATH (Calcium-dependent protein kinase 14 OS=Arabidopsis thaliana GN=CPK14 PE=2 SV=1)

HSP 1 Score: 236.884 bits (603), Expect = 8.350e-62
Identity = 126/240 (52.50%), Postives = 161/240 (67.08%), Query Frame = 1
Query:    1 LYILPSGVPPFWAETQQGIFDAVLKGHIDFESDPWPLISDSAKDLIRKMLCSQPSERLTAHEVLCHPWICENGVAPDRSLDPAVLSRLKQFSAMNKLKKMALRVIAESLSEEEIAGLKEMFKAMDTDNSGAITFDELKAGLRRYGSTLKDTEIRDLMDAADVDNSGTIDYGEFIAATVHLNKLEREEHLVAAFQYFDKDGSGYITVDELQQACAE--HNMTDVLL*DIIREVLIRYDGRI 714
            LYIL  GVPPFWAET+ G+  A+LK  IDF+ DPWP +SD+AKDLI+KML   P  RLTA +VL HPWI     A + SL   V +RLKQFS MNKLKK ALRVIAE LS EE + +KE F+ MDT N G IT  EL  GL++ G  +   +I+ LMDA DVD  G +D  EF+A +VH+ KL  +EHL  AF +FDK+ SGYI ++EL+ A A+     ++ ++  II +V    DG+I
Sbjct:  244 LYILLCGVPPFWAETEHGVAKAILKSVIDFKRDPWPKVSDNAKDLIKKMLHPDPRRRLTAQQVLDHPWIQNGKNASNVSLGETVRARLKQFSVMNKLKKRALRVIAEHLSVEETSCIKERFQVMDTSNRGKITITELGIGLQKLGIVVPQDDIQILMDAGDVDKDGYLDVNEFVAISVHIRKLGNDEHLKKAFTFFDKNKSGYIEIEELRDALADDVDTTSEEVVEAIILDVDTNKDGKI 483          
BLAST of FC930952 vs. ExPASy Swiss-Prot
Match: CDPKV_ARATH (Calcium-dependent protein kinase 31 OS=Arabidopsis thaliana GN=CPK31 PE=2 SV=2)

HSP 1 Score: 234.958 bits (598), Expect = 3.173e-61
Identity = 125/240 (52.08%), Postives = 163/240 (67.92%), Query Frame = 1
Query:    1 LYILPSGVPPFWAETQQGIFDAVLKGHIDFESDPWPLISDSAKDLIRKMLCSQPSERLTAHEVLCHPWICENGVAPDRSLDPAVLSRLKQFSAMNKLKKMALRVIAESLSEEEIAGLKEMFKAMDTDNSGAITFDELKAGLRRYGSTLKDTEIRDLMDAADVDNSGTIDYGEFIAATVHLNKLEREEHLVAAFQYFDKDGSGYITVDELQQACAEHNMTD-VLL*DIIREVLIRYDGRID 717
            LYIL  G PPF  E +  +F  +    ID +S+ W  I   AK L+ +ML   P ER++A EVL HPW+ ++G A D+ +D  VLSRLKQF  MNKLKK+AL+VIA +LSEEEI GLK +F  +DTD SG IT +ELK GL R GS L  TE+  LM+AADVD +GTID  EFI+AT+H  +L+R++H+  AFQ+FDKD  G+IT +EL+ A  EH + D V +  II EV    DG+I+
Sbjct:  222 LYILLCGKPPFVTEPEAQMFSEIKSAKIDVDSESWKFIDVKAKHLVNRMLNRNPKERISAAEVLGHPWM-KDGEASDKPIDGVVLSRLKQFRDMNKLKKVALKVIAANLSEEEIKGLKTLFTNIDTDKSGTITLEELKTGLTRLGSNLSKTEVEQLMEAADVDGNGTIDIDEFISATMHRYRLDRDDHVYQAFQHFDKDNDGHITKEELEMAMKEHGVGDEVSIKQIITEVDTDNDGKIN 460          
BLAST of FC930952 vs. ExPASy Swiss-Prot
Match: CDPKO_ARATH (Calcium-dependent protein kinase 24 OS=Arabidopsis thaliana GN=CPK24 PE=2 SV=1)

HSP 1 Score: 230.335 bits (586), Expect = 7.815e-60
Identity = 112/243 (46.09%), Postives = 165/243 (67.90%), Query Frame = 1
Query:    1 LYILPSGVPPFWAETQQGIFDAVLKGHIDFESDPWPLISDSAKDLIRKMLCSQPSERLTAHEVLCHPWICENGVAPDRSLDPAVLSRLKQFSAMNKLKKMALRVIAESLSEEEIAGLKEMFKAMDTDNSGAITFDELKAGLRRYGSTLKDTEIRDLMDAADVDNSGTIDYGEFIAATVHLNKLEREEHLVAAFQYFDKDGSGYITVDELQQACAEH-----NMTDVLL*DIIREVLIRYDGRI 714
            LYIL  GVPPFWAET++GI  A+++G+IDFE DPWP +S  AK+L++ ML + P  RLT  EVL HPWI     AP+ +L   V ++++QF  MN+ KK  LR++A++L  EEIA + +MF+ MDTD +G +TF+EL+ GL++ G  + D +++ LMDAAD D +G +   EF+  ++HL ++  +EHL  AF+YFDK+G+G+I +DEL+ A  +      N  D  + DI  +V +  DGRI
Sbjct:  256 LYILLCGVPPFWAETEEGIAHAIVRGNIDFERDPWPKVSHEAKELVKNMLDANPYSRLTVQEVLEHPWIRNAERAPNVNLGDNVRTKIQQFLLMNRFKKKVLRIVADNLPNEEIAAIVQMFQTMDTDKNGHLTFEELRDGLKKIGQVVPDGDVKMLMDAADTDGNGMLSCDEFVTLSIHLKRMGCDEHLQEAFKYFDKNGNGFIELDELKVALCDDKLGHANGNDQWIKDIFFDVDLNKDGRI 498          
BLAST of FC930952 vs. ExPASy Swiss-Prot
Match: CDPKR_ARATH (Calcium-dependent protein kinase 27 OS=Arabidopsis thaliana GN=CPK27 PE=1 SV=3)

HSP 1 Score: 215.312 bits (547), Expect = 2.602e-55
Identity = 117/240 (48.75%), Postives = 155/240 (64.58%), Query Frame = 1
Query:    1 LYILPSGVPPFWAETQQGIFDAVLKGHIDFESDPWPLISDSAKDLIRKMLCSQPSERLTAHEVLCHPWICENGVAPDRSLDPAVLSRLKQFSAMNKLKKMALRVIAESLSEEEIAGLKEMFKAMDTDNSGAITFDELKAGLRRYGSTLKDTEIRDLMDAADVDNSGTIDYGEFIAATVHLNKLEREEHLVAAFQYFDKDGSGYITVDELQQACAEHNMTDV-LL*DIIREVLIRYDGRID 717
            LYIL  G  PF  E +  +F+ +    ID+  +PWPL    A  L+++ML   P ER++A EVL HPW+ E G A D+ +D  VLSRLK+F   NK KK+ L+ IA +LSEEEI GLK +F  +DTD SG IT +ELK GL R GS L  TE+  LM+AAD+D +GTID  EFI+AT+H  KL+R+EH+  AFQ+FDKD  G+IT +EL+ A  E    D   +  II +     DG+I+
Sbjct:  222 LYILLCGKSPFVKEPEGQMFNEIKSLEIDYSEEPWPLRDSRAIHLVKRMLDRNPKERISAAEVLGHPWMKE-GEASDKPIDGVVLSRLKRFRDANKFKKVVLKFIAANLSEEEIKGLKTLFTNIDTDKSGNITLEELKTGLTRLGSNLSKTEVEQLMEAADMDGNGTIDIDEFISATMHRYKLDRDEHVYKAFQHFDKDNDGHITKEELEMAMKEDGAGDEGSIKQIIADADTDNDGKIN 460          
BLAST of FC930952 vs. ExPASy Swiss-Prot
Match: CDPKP_ARATH (Calcium-dependent protein kinase 25 OS=Arabidopsis thaliana GN=CPK25 PE=2 SV=1)

HSP 1 Score: 212.231 bits (539), Expect = 2.202e-54
Identity = 107/188 (56.91%), Postives = 135/188 (71.81%), Query Frame = 1
Query:    1 LYILPSGVPPFWAETQQGIFDAVLKGHIDFESDPWPLISDSAKDLIRKMLCSQPSERLTAHEVLCHPWICENGVAPDRSLDPAVLSRLKQFSAMNKLKKMALRVIAESLSEEEIAGLKEMFKAMDTDNSGAITFDELKAGLRRYGSTLKDTEIRDLMD-AADVDNSGTIDYGEFIAATVHLNKLEREE 561
            +Y+L SG  PFW ET++ IF+ VL+G +D  SDPWP +S+SAKDLIRKML   P +RLTA +VLCHPWI + G APD  LD  VLSRLK+FSA +KLKKMALRVIAE LSEEEI  L+E FK +D+  SG +T+ ELK GL R+ + L +++I  LM    DV    T+DY EFI A V L +++ EE
Sbjct:  322 IYVLLSGSAPFWGETEEEIFNEVLEGELDLTSDPWPQVSESAKDLIRKMLERNPIQRLTAQQVLCHPWIRDEGNAPDTPLDTTVLSRLKKFSATDKLKKMALRVIAERLSEEEIHELRETFKTIDSGKSGRVTYKELKNGLERFNTNLDNSDINSLMQIPTDVHLEDTVDYNEFIEAIVRLRQIQEEE 509          
BLAST of FC930952 vs. ExPASy Swiss-Prot
Match: CDPKG_ARATH (Calcium-dependent protein kinase 16 OS=Arabidopsis thaliana GN=CPK16 PE=1 SV=1)

HSP 1 Score: 188.734 bits (478), Expect = 2.608e-47
Identity = 98/244 (40.16%), Postives = 149/244 (61.07%), Query Frame = 1
Query:    4 YILPSGVPPFWAETQQGIFDAVLKGHIDFESDPWPLISDSAKDLIRKMLCSQPSERLTAHEVLCHPWICENGVAPDRSLDPAVLSRLKQFSAMNKLKKMALRVIAESLSEEEIAGLKEMFKAMDTDNSGAITFDELKAGLRR-YGSTLKDTEIRDLMDAADVDNSGTIDYGEFIAATVHLNKLER------EEHLVAAFQYFDKDGSGYITVDELQQACAEHNMTDVLL*DIIREVLIRYDGRI 714
            YIL  G  PFW +T+ GIF  VLK   DF   PWP IS+SAKD ++K+L   P  RLTA + L HPW+ E G A +  +D +VL+ ++QF   ++LK+ ALR +A +L EEE+A L++ F A+D D +G I+ +E++  L + +   LKD  + +++ A D +  G +D+GEF+AA +H+N+LE       ++   AAF+ FD DG G+IT +EL+     H      +  ++ E  I  DG+I
Sbjct:  301 YILLCGRRPFWDKTEDGIFKEVLKNKPDFRRKPWPTISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGGDASEIPIDISVLNNMRQFVKFSRLKQFALRALATTLDEEELADLRDQFDAIDVDKNGVISLEEMRQALAKDHPWKLKDARVAEILQAIDSNTDGFVDFGEFVAAALHVNQLEEHDSEKWQQRSRAAFEKFDIDGDGFITAEELRM----HTGLKGSIEPLLEEADIDNDGKI 540          
The following BLAST results are available for this feature:
BLAST of FC930952 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 269
Match NameE-valueIdentityDescription
CDPKD_ARATH3.066e-6452.50Calcium-dependent protein kinase 13 OS=Arabidopsis... [more]
CDPKU_ARATH5.230e-6452.28Calcium-dependent protein kinase 30 OS=Arabidopsis... [more]
CDPKW_ARATH1.288e-6251.05Calcium-dependent protein kinase 32 OS=Arabidopsis... [more]
CDPK8_ARATH2.197e-6251.04Calcium-dependent protein kinase 8 OS=Arabidopsis ... [more]
CDPKE_ARATH8.350e-6252.50Calcium-dependent protein kinase 14 OS=Arabidopsis... [more]
CDPKV_ARATH3.173e-6152.08Calcium-dependent protein kinase 31 OS=Arabidopsis... [more]
CDPKO_ARATH7.815e-6046.09Calcium-dependent protein kinase 24 OS=Arabidopsis... [more]
CDPKR_ARATH2.602e-5548.75Calcium-dependent protein kinase 27 OS=Arabidopsis... [more]
CDPKP_ARATH2.202e-5456.91Calcium-dependent protein kinase 25 OS=Arabidopsis... [more]
CDPKG_ARATH2.608e-4740.16Calcium-dependent protein kinase 16 OS=Arabidopsis... [more]

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Properties
Property NameValue
Genbank descriptionC34110G09EF PostHarvP1 Citrus clementina cDNA clone C34110G09, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC930952 ID=FC930952; Name=FC930952; organism=Citrus clementina; type=EST; length=718bp
CTGTATATATTGCCTAGTGGAGTGCCACCATTTTGGGCAGAAACACAACA
GGGAATATTTGATGCGGTGTTGAAGGGACACATTGACTTTGAGTCTGACC
CTTGGCCACTAATATCCGACAGCGCAAAAGACCTTATTCGGAAGATGTTA
TGCTCTCAACCATCAGAACGCCTGACTGCTCATGAAGTTTTATGTCATCC
CTGGATCTGTGAAAATGGAGTTGCTCCTGATAGGTCCCTTGATCCAGCTG
TACTTTCTCGTCTCAAACAATTCTCTGCAATGAATAAATTGAAAAAGATG
GCTTTACGGGTTATAGCTGAAAGCCTTTCTGAAGAGGAGATTGCTGGTTT
AAAGGAAATGTTCAAGGCCATGGATACTGACAATAGTGGTGCAATTACAT
TTGATGAACTCAAAGCTGGTTTACGAAGATATGGCTCTACCTTGAAGGAT
ACAGAGATACGTGATCTTATGGATGCGGCTGATGTGGACAATAGTGGAAC
TATTGATTATGGAGAATTTATAGCTGCAACTGTTCACCTCAATAAATTAG
AACGTGAGGAACATCTTGTTGCTGCATTCCAGTACTTCGACAAGGATGGA
AGTGGTTATATTACGGTTGATGAACTTCAGCAAGCATGTGCTGAACATAA
CATGACAGATGTTTTACTTTGAGATATAATCAGAGAAGTTTTGATCAGAT
ATGATGGAAGAATTGACT
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