FC930952

Overview
NameFC930952
Unique NameFC930952
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length718
Libraries
Library NameType
PostHarvP1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC930952 vs. ExPASy Swiss-Prot
Match: CALMA_ARBPU (Calmodulin-alpha (Fragment) OS=Arbacia punctulata PE=2 SV=2)

HSP 1 Score: 91.6633 bits (226), Expect = 4.338e-18
Identity = 50/138 (36.23%), Postives = 78/138 (56.52%), Query Frame = 1
Query:  313 IAESLSEEEIAGLKEMFKAMDTDNSGAITFDELKAGLRRYGSTLKDTEIRDLMDAADVDNSGTIDYGEFIAATVH-LNKLEREEHLVAAFQYFDKDGSGYITVDELQQACAE--HNMTDVLL*DIIREVLIRYDGRID 717
            +A+ L+EE+IA  KE F   D D  G IT  EL   +R  G    + E++D+++  D D +GTID+ EF+      +   + EE +  AF+ FDKDG+GYI+  EL+         +TD  + ++IRE  I  DG+++
Sbjct:    1 MADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVN 138          
BLAST of FC930952 vs. ExPASy Swiss-Prot
Match: CALM_STYLE (Calmodulin OS=Stylonychia lemnae PE=3 SV=2)

HSP 1 Score: 91.2781 bits (225), Expect = 5.666e-18
Identity = 50/138 (36.23%), Postives = 79/138 (57.25%), Query Frame = 1
Query:  313 IAESLSEEEIAGLKEMFKAMDTDNSGAITFDELKAGLRRYGSTLKDTEIRDLMDAADVDNSGTIDYGEFIAATVH-LNKLEREEHLVAAFQYFDKDGSGYITVDELQQACAE--HNMTDVLL*DIIREVLIRYDGRID 717
            +A++L+EE+IA  KE F   D D  G IT  EL   +R  G    + E++D+++  D D +GTID+ EF++     +   + EE LV AF+ FD+DG+G I+  EL+         +TD  + ++IRE  +  DG I+
Sbjct:    1 MADNLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLSLMARKMKDTDTEEELVEAFKVFDRDGNGLISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGHIN 138          
BLAST of FC930952 vs. ExPASy Swiss-Prot
Match: CALM_ELEEL (Calmodulin OS=Electrophorus electricus GN=calm PE=2 SV=2)

HSP 1 Score: 91.2781 bits (225), Expect = 5.666e-18
Identity = 50/138 (36.23%), Postives = 78/138 (56.52%), Query Frame = 1
Query:  313 IAESLSEEEIAGLKEMFKAMDTDNSGAITFDELKAGLRRYGSTLKDTEIRDLMDAADVDNSGTIDYGEFIAATV-HLNKLEREEHLVAAFQYFDKDGSGYITVDELQQACAE--HNMTDVLL*DIIREVLIRYDGRID 717
            +A+ L+EE+IA  KE F   D D  G IT  EL   +R  G    + E++D+++  D D +GTID+ EF+      +   + EE +  AF+ FDKDG+GYI+  EL+         +TD  + ++IRE  I  DG+++
Sbjct:    1 MADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMAKKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVN 138          
BLAST of FC930952 vs. ExPASy Swiss-Prot
Match: CALM_AGABI (Calmodulin OS=Agaricus bisporus PE=1 SV=2)

HSP 1 Score: 91.2781 bits (225), Expect = 5.666e-18
Identity = 50/138 (36.23%), Postives = 76/138 (55.07%), Query Frame = 1
Query:  313 IAESLSEEEIAGLKEMFKAMDTDNSGAITFDELKAGLRRYGSTLKDTEIRDLMDAADVDNSGTIDYGEFIAATVH-LNKLEREEHLVAAFQYFDKDGSGYITVDELQQACAE--HNMTDVLL*DIIREVLIRYDGRID 717
            +A+ LSEE+I+  KE F   D D  G IT  EL   +R  G      E+ D+++  D D +GTID+ EF+      +   + EE +  AF+ FDKDG+GYI+  EL+         +TD  + ++IRE  +  DG+I+
Sbjct:    1 MADQLSEEQISEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPSQAELEDMINEVDADGNGTIDFPEFLTMMARKMRDTDSEEEIKEAFKVFDKDGNGYISAAELRHVMTNLGEKLTDSEVDEMIREADVDGDGQIN 138          
BLAST of FC930952 vs. ExPASy Swiss-Prot
Match: CALMS_CHICK (Calmodulin, striated muscle OS=Gallus gallus GN=CCM1 PE=3 SV=2)

HSP 1 Score: 91.2781 bits (225), Expect = 5.666e-18
Identity = 51/138 (36.96%), Postives = 77/138 (55.80%), Query Frame = 1
Query:  313 IAESLSEEEIAGLKEMFKAMDTDNSGAITFDELKAGLRRYGSTLKDTEIRDLMDAADVDNSGTIDYGEFIAATVH-LNKLEREEHLVAAFQYFDKDGSGYITVDELQQACAE--HNMTDVLL*DIIREVLIRYDGRID 717
            +AE LSEE+IA  KE F   D D  G IT  EL   +R  G    + E++D++   D D SGTID+ EF++     +   + EE +  AF+ FDKDG+GYI+  EL+         +TD  + ++I+E     DG+++
Sbjct:    1 MAERLSEEQIAEFKEAFSLFDRDGDGCITTMELGTVMRSLGQNPTEAELQDMVGEVDADGSGTIDFPEFLSLMARKMRDSDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIKEADCNNDGQVN 138          
BLAST of FC930952 vs. ExPASy Swiss-Prot
Match: CALM_TETPY (Calmodulin OS=Tetrahymena pyriformis PE=1 SV=4)

HSP 1 Score: 90.8929 bits (224), Expect = 7.400e-18
Identity = 50/138 (36.23%), Postives = 78/138 (56.52%), Query Frame = 1
Query:  313 IAESLSEEEIAGLKEMFKAMDTDNSGAITFDELKAGLRRYGSTLKDTEIRDLMDAADVDNSGTIDYGEFIAATVH-LNKLEREEHLVAAFQYFDKDGSGYITVDELQQACAE--HNMTDVLL*DIIREVLIRYDGRID 717
            +A+ L+EE+IA  KE F   D D  G IT  EL   +R  G    + E++D+++  D D +GTID+ EF++     +   + EE L+ AF+ FD+DG+G I+  EL+         +TD  + ++IRE  I  DG I+
Sbjct:    1 MADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLSLMARKMKDTDTEEELIEAFKVFDRDGNGLISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGHIN 138          
BLAST of FC930952 vs. ExPASy Swiss-Prot
Match: CALM_STRIE (Calmodulin OS=Strongylocentrotus intermedius PE=2 SV=3)

HSP 1 Score: 90.8929 bits (224), Expect = 7.400e-18
Identity = 50/141 (35.46%), Postives = 79/141 (56.03%), Query Frame = 1
Query:  304 LRVIAESLSEEEIAGLKEMFKAMDTDNSGAITFDELKAGLRRYGSTLKDTEIRDLMDAADVDNSGTIDYGEFIAATVH-LNKLEREEHLVAAFQYFDKDGSGYITVDELQQACAE--HNMTDVLL*DIIREVLIRYDGRID 717
            L + A+ L+EE+IA  KE F   D D  G IT  EL   +R  G    + E++D+++  D D +GTID+ EF+      +   + EE +  AF+ FDKDG+G+I+  EL+         +TD  + ++IRE  I  DG+++
Sbjct:    5 LTINADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVN 145          
BLAST of FC930952 vs. ExPASy Swiss-Prot
Match: CALM_SACJA (Calmodulin OS=Saccharina japonica GN=cam PE=2 SV=1)

HSP 1 Score: 90.8929 bits (224), Expect = 7.400e-18
Identity = 50/138 (36.23%), Postives = 78/138 (56.52%), Query Frame = 1
Query:  313 IAESLSEEEIAGLKEMFKAMDTDNSGAITFDELKAGLRRYGSTLKDTEIRDLMDAADVDNSGTIDYGEFIAATVH-LNKLEREEHLVAAFQYFDKDGSGYITVDELQQACAE--HNMTDVLL*DIIREVLIRYDGRID 717
            +A+ L+EE+IA  KE F   D D  G IT  EL   +R  G    + E+ D+++  D D +GTID+ EF+      +   + EE ++ AF+ FDKDG+G+I+  EL+         +TD  + ++IRE  I  DG+I+
Sbjct:    1 MADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELADMINEVDADGNGTIDFPEFLTMMARKMKDTDSEEEILEAFKVFDKDGNGFISAAELRHIMTNLGEKLTDEEVDEMIREADIDGDGQIN 138          
BLAST of FC930952 vs. ExPASy Swiss-Prot
Match: CALM_HALOK (Calmodulin OS=Halichondria okadai PE=2 SV=3)

HSP 1 Score: 90.8929 bits (224), Expect = 7.400e-18
Identity = 49/138 (35.51%), Postives = 79/138 (57.25%), Query Frame = 1
Query:  313 IAESLSEEEIAGLKEMFKAMDTDNSGAITFDELKAGLRRYGSTLKDTEIRDLMDAADVDNSGTIDYGEFIAATVH-LNKLEREEHLVAAFQYFDKDGSGYITVDELQQACAE--HNMTDVLL*DIIREVLIRYDGRID 717
            + ++LSEE+IA  KE F   D D  G IT  EL   +R  G    + E++D+++  D D +GTID+ EF+      + + + EE +  AF+ FDKDG+G+I+  EL+         +TD  + ++IRE  I  DG+++
Sbjct:    1 MTDALSEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMARKMKETDSEEEIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVN 138          
BLAST of FC930952 vs. ExPASy Swiss-Prot
Match: CALMB_HALRO (Calmodulin-B OS=Halocynthia roretzi PE=3 SV=3)

HSP 1 Score: 90.8929 bits (224), Expect = 7.400e-18
Identity = 49/138 (35.51%), Postives = 79/138 (57.25%), Query Frame = 1
Query:  313 IAESLSEEEIAGLKEMFKAMDTDNSGAITFDELKAGLRRYGSTLKDTEIRDLMDAADVDNSGTIDYGEFIAATVH-LNKLEREEHLVAAFQYFDKDGSGYITVDELQQACAE--HNMTDVLL*DIIREVLIRYDGRID 717
            +A+ L+EE+IA  KE F   D D  G IT  EL   +R  G    + E++D+++  D D +GTID+ EF+      + + + EE +  AF+ FDKDG+G+I+  EL+         +TD  + ++IRE  I  DG+++
Sbjct:    1 MADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMARKMKETDSEEEIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVN 138          
The following BLAST results are available for this feature:
BLAST of FC930952 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 269
Match NameE-valueIdentityDescription
CALMA_ARBPU4.338e-1836.23Calmodulin-alpha (Fragment) OS=Arbacia punctulata ... [more]
CALM_STYLE5.666e-1836.23Calmodulin OS=Stylonychia lemnae PE=3 SV=2[more]
CALM_ELEEL5.666e-1836.23Calmodulin OS=Electrophorus electricus GN=calm PE=... [more]
CALM_AGABI5.666e-1836.23Calmodulin OS=Agaricus bisporus PE=1 SV=2[more]
CALMS_CHICK5.666e-1836.96Calmodulin, striated muscle OS=Gallus gallus GN=CC... [more]
CALM_TETPY7.400e-1836.23Calmodulin OS=Tetrahymena pyriformis PE=1 SV=4[more]
CALM_STRIE7.400e-1835.46Calmodulin OS=Strongylocentrotus intermedius PE=2 ... [more]
CALM_SACJA7.400e-1836.23Calmodulin OS=Saccharina japonica GN=cam PE=2 SV=1[more]
CALM_HALOK7.400e-1835.51Calmodulin OS=Halichondria okadai PE=2 SV=3[more]
CALMB_HALRO7.400e-1835.51Calmodulin-B OS=Halocynthia roretzi PE=3 SV=3[more]

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Properties
Property NameValue
Genbank descriptionC34110G09EF PostHarvP1 Citrus clementina cDNA clone C34110G09, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC930952 ID=FC930952; Name=FC930952; organism=Citrus clementina; type=EST; length=718bp
CTGTATATATTGCCTAGTGGAGTGCCACCATTTTGGGCAGAAACACAACA
GGGAATATTTGATGCGGTGTTGAAGGGACACATTGACTTTGAGTCTGACC
CTTGGCCACTAATATCCGACAGCGCAAAAGACCTTATTCGGAAGATGTTA
TGCTCTCAACCATCAGAACGCCTGACTGCTCATGAAGTTTTATGTCATCC
CTGGATCTGTGAAAATGGAGTTGCTCCTGATAGGTCCCTTGATCCAGCTG
TACTTTCTCGTCTCAAACAATTCTCTGCAATGAATAAATTGAAAAAGATG
GCTTTACGGGTTATAGCTGAAAGCCTTTCTGAAGAGGAGATTGCTGGTTT
AAAGGAAATGTTCAAGGCCATGGATACTGACAATAGTGGTGCAATTACAT
TTGATGAACTCAAAGCTGGTTTACGAAGATATGGCTCTACCTTGAAGGAT
ACAGAGATACGTGATCTTATGGATGCGGCTGATGTGGACAATAGTGGAAC
TATTGATTATGGAGAATTTATAGCTGCAACTGTTCACCTCAATAAATTAG
AACGTGAGGAACATCTTGTTGCTGCATTCCAGTACTTCGACAAGGATGGA
AGTGGTTATATTACGGTTGATGAACTTCAGCAAGCATGTGCTGAACATAA
CATGACAGATGTTTTACTTTGAGATATAATCAGAGAAGTTTTGATCAGAT
ATGATGGAAGAATTGACT
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