FC930953
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC930953 vs. ExPASy Swiss-Prot
Match: SERA_HUMAN (D-3-phosphoglycerate dehydrogenase OS=Homo sapiens GN=PHGDH PE=1 SV=4) HSP 1 Score: 84.7297 bits (208), Expect = 5.027e-16 Identity = 62/200 (31.00%), Postives = 88/200 (44.00%), Query Frame = 1 Query: 82 EIVVGSTAGIDHVDLQECRRRGILVTNAGNAFSEDGAXXXXXXXXXXXXXXXXXXXXXRNGLWPDHGAYPLGSTLGGKRVGIVGLGSIGSEVAKRLVPFGCSIAYTSRKKKPGVSYPFYANVSGLAADS-----DVLIVCCALTEETHHMINKDVMTALGKEGVIINVGRGALIDEKELVHFLVRGELGGAGLDVFEDEP 666 ++V + G+D+VDL+ R+GILV N N S A ++G W +G+ L GK +GI+GLG IG EVA R+ FG P VS F V L + D + V L T ++N + K ++N RG ++DE L+ L G+ GA LDVF +EP Sbjct: 71 QVVGRAGTGVDNVDLEAATRKGILVMNTPNGNSLSAAELTCGMIMCLARQIPQATASMKDGKWERKKF--MGTELNGKTLGILGLGRIGREVATRMQSFGMKTIGYDPIISPEVSASF--GVQQLPLEEIWPLCDFITVHTPLLPSTTGLLNDNTFAQCKKGVRVVNCARGGIVDEGALLRALQSGQCAGAALDVFTEEP 266
BLAST of FC930953 vs. ExPASy Swiss-Prot
Match: GHRB_SHIF8 (Glyoxylate/hydroxypyruvate reductase B OS=Shigella flexneri serotype 5b (strain 8401) GN=ghrB PE=3 SV=1) HSP 1 Score: 84.7297 bits (208), Expect = 5.027e-16 Identity = 57/194 (29.38%), Postives = 87/194 (44.85%), Query Frame = 1 Query: 100 TAGIDHVDLQECRRRGILVTNAGNAFSEDGAXXXXXXXXXXXXXXXXXXXXXRNGLWPDH-GAYPLGSTLGGKRVGIVGLGSIGSEVAKRL-VPFGCSIAYTSRKKKPGVSYPF---YANVSGLAADSDVLIVCCALTEETHHMINKDVMTALGKEGVIINVGRGALIDEKELVHFLVRGELGGAGLDVFEDEP 666 + G D+ D+ R IL+ + +E A + G W G G+ + K +GIVG+G IG +A+R F I Y +R+ F Y ++ L +SD + + LT+ETHH+ + + + IN GRG ++DE L+ L +GE+ AGLDVFE EP Sbjct: 74 SVGYDNFDVDALTARKILLMHTPTVLTETVADTLMALVLSTARRVVEVAERVKAGEWTASIGPDWYGTDVHHKTLGIVGMGRIGMALAQRAHFGFNMPILYNARRHHKEAEERFNARYCDLDTLLQESDFVCLILPLTDETHHLFGAEQFAKMKSSAIFINAGRGPVVDENALIAALQKGEIHVAGLDVFEQEP 267
BLAST of FC930953 vs. ExPASy Swiss-Prot
Match: VANH_ENTFC (D-specific alpha-keto acid dehydrogenase OS=Enterococcus faecium GN=vanH PE=1 SV=1) HSP 1 Score: 84.3445 bits (207), Expect = 6.566e-16 Identity = 49/124 (39.52%), Postives = 69/124 (55.65%), Query Frame = 1 Query: 295 GSTLGGKRVGIVGLGSIGSEVAKRLVPFGCSIAYTSRKKKPGVSY-PFYANVSGLAADSDVLIVCCALTEETHHMINKDVMTALGKEGVIINVGRGALIDEKELVHFLVRGELGGAGLDVFEDE 663 G L VG+VG G IG V +RL FGC + SR + V+Y PF L +SD++ + L +TH++I+ + + + + +IN GRG L+D ELV L G+LGGA LDV E E Sbjct: 141 GKVLSDMTVGVVGTGQIGKAVIERLRGFGCKVLAYSRSRSIEVNYVPF----DELLQNSDIVTLHVPLNTDTHYIISHEQIQRMKQGAFLINTGRGPLVDTYELVKALENGKLGGAALDVLEGE 260
BLAST of FC930953 vs. ExPASy Swiss-Prot
Match: SERA_RAT (D-3-phosphoglycerate dehydrogenase OS=Rattus norvegicus GN=Phgdh PE=1 SV=3) HSP 1 Score: 84.3445 bits (207), Expect = 6.566e-16 Identity = 61/200 (30.50%), Postives = 89/200 (44.50%), Query Frame = 1 Query: 82 EIVVGSTAGIDHVDLQECRRRGILVTNAGNAFSEDGAXXXXXXXXXXXXXXXXXXXXXRNGLWPDHGAYPLGSTLGGKRVGIVGLGSIGSEVAKRLVPFGCSIAYTSRKKKPGVSYPFYANVSGLAADS-----DVLIVCCALTEETHHMINKDVMTALGKEGVIINVGRGALIDEKELVHFLVRGELGGAGLDVFEDEP 666 ++V + G+D+VDL+ R+G+LV N N S A ++G W D + +G+ L GK +GI+GLG IG EVA R+ FG P V+ F V L + D + V L T ++N K ++N RG ++DE L+ L G+ GA LDVF +EP Sbjct: 71 QVVGRAGTGVDNVDLEAATRKGVLVMNTPNGNSLSAAELTCGMLMCLARQIPQATASMKDGKW-DRKKF-MGTELNGKTLGILGLGRIGREVAARMQAFGMKTVGYDPIISPEVAASF--GVQQLPLEEIWPLCDFITVHTPLLPSTTGLLNDSTFAQCKKGVRVVNCARGGIVDEGALLRALQSGQCAGAALDVFTEEP 266
BLAST of FC930953 vs. ExPASy Swiss-Prot
Match: SERA_MACFA (D-3-phosphoglycerate dehydrogenase OS=Macaca fascicularis GN=PHGDH PE=2 SV=4) HSP 1 Score: 84.3445 bits (207), Expect = 6.566e-16 Identity = 61/200 (30.50%), Postives = 88/200 (44.00%), Query Frame = 1 Query: 82 EIVVGSTAGIDHVDLQECRRRGILVTNAGNAFSEDGAXXXXXXXXXXXXXXXXXXXXXRNGLWPDHGAYPLGSTLGGKRVGIVGLGSIGSEVAKRLVPFGCSIAYTSRKKKPGVSYPFYANVSGLAADS-----DVLIVCCALTEETHHMINKDVMTALGKEGVIINVGRGALIDEKELVHFLVRGELGGAGLDVFEDEP 666 ++V + G+D+VDL+ R+G+LV N N S A ++G W +G+ L GK +GI+GLG IG EVA R+ FG P VS F V L + D + V L T ++N + K ++N RG ++DE L+ L G+ GA LDVF +EP Sbjct: 71 QVVGRAGTGVDNVDLEAATRKGVLVMNTPNGNSLSAAELTCGMIMCLARQIPQATASMKDGKWERKKF--MGTELNGKTLGILGLGRIGREVATRMQSFGMKTIGYDPIISPEVSASF--GVQQLPLEEIWPLCDFITVHTPLLPSTTGLLNDNTFAQCKKGVRVVNCARGGIVDEGALLRALQSGQCAGAALDVFTEEP 266
BLAST of FC930953 vs. ExPASy Swiss-Prot
Match: SERA_BOVIN (D-3-phosphoglycerate dehydrogenase OS=Bos taurus GN=PHGDH PE=2 SV=3) HSP 1 Score: 84.3445 bits (207), Expect = 6.566e-16 Identity = 62/200 (31.00%), Postives = 87/200 (43.50%), Query Frame = 1 Query: 82 EIVVGSTAGIDHVDLQECRRRGILVTNAGNAFSEDGAXXXXXXXXXXXXXXXXXXXXXRNGLWPDHGAYPLGSTLGGKRVGIVGLGSIGSEVAKRLVPFGCSIAYTSRKKKPGVSYPFYANVSGLAADS-----DVLIVCCALTEETHHMINKDVMTALGKEGVIINVGRGALIDEKELVHFLVRGELGGAGLDVFEDEP 666 ++V + G+D+VDL+ R+GILV N N S A ++G W +G+ L GK +GI+GLG IG EVA R+ FG P VS F V L + D + V L T ++N K ++N RG ++DE L+ L G+ GA LDVF +EP Sbjct: 71 QVVGRAGTGVDNVDLEAATRKGILVMNTPNGNSLSAAELTCGMIMCLARQIPQAAASMKDGKWERKKF--MGTELNGKVLGILGLGRIGREVATRMQSFGMKTIGYDPIISPEVSASF--GVQQLPLEQIWPLCDFITVHTPLLPSTTGLLNDSTFAQCKKGVCVVNCARGGIVDEGALLRALQSGQCAGAALDVFTEEP 266
BLAST of FC930953 vs. ExPASy Swiss-Prot
Match: FDH_ARATH (Formate dehydrogenase, mitochondrial OS=Arabidopsis thaliana GN=FDH1 PE=1 SV=1) HSP 1 Score: 84.3445 bits (207), Expect = 6.566e-16 Identity = 60/203 (29.56%), Postives = 94/203 (46.31%), Query Frame = 1 Query: 100 TAGI--DHVDLQECRRRGILVTNAGNAFSEDGAXXXXXXXXXXXXXXXXXXXXXRNGLWPDHGAYPLGSTLGGKRVGIVGLGSIGSEVAKRLVPFGCSIAYTSR-------KKKPGVSYPFYANVSGLAADSDVLIVCCALTEETHHMINKDVMTALGKEGVIINVGRGALIDEKELVHFLVRGELGGAGLDVFEDEPHVPKE 681 TAGI DH+DLQ G+ V + A G W G L GK +G VG G IG + +RL PFGC++ Y R +K+ G F +++ + DV+++ LTE+T M NK+++ L K +I+N RGA+++ + +V + G +GG DV++ +P PK+ Sbjct: 125 TAGIGSDHIDLQAAAAAGLTVAEVTGSNVVSVAEDELMRILILMRNFVPGYNQVVKGEWNVAGIAYRAYDLEGKTIGTVGAGRIGKLLLQRLKPFGCNLLYHDRLQMAPELEKETGAK--FVEDLNEMLPKCDVIVINMPLTEKTRGMFNKELIGKLKKGVLIVNNARGAIMERQAVVDAVESGHIGGYSGDVWDPQP-APKD 324
BLAST of FC930953 vs. ExPASy Swiss-Prot
Match: SERA_MYCTU (D-3-phosphoglycerate dehydrogenase OS=Mycobacterium tuberculosis GN=serA PE=1 SV=1) HSP 1 Score: 83.5741 bits (205), Expect = 1.120e-15 Identity = 61/208 (29.33%), Postives = 89/208 (42.79%), Query Frame = 1 Query: 82 EIVVGSTAGIDHVDLQECRRRGILVTNAGNAFSEDGAXXXXXXXXXXXXXXXXXXXXXRNGLWPDHGAYPLGSTLGGKRVGIVGLGSIGSEVAKRLVPFGCSIA----YTSRKKKPGVSYPFYANVSGLAADSDVLIVCCALTEETHHMINKDVMTALGKEGVIINVGRGALIDEKELVHFLVRGELGGAGLDVFEDEPHVPKELLTL 693 +IV + G+D+VD+ RG+LV NA + A R W G+ + GK VG+VGLG IG VA+R+ FG + Y S + + + + L A +D + V T ET +I+K+ + +I+N RG L+DE L + G + AGLDVF EP L L Sbjct: 67 KIVARAGVGLDNVDVDAATARGVLVVNAPTSNIHSAAEHALALLLAASRQIPAADASLREHTWKRSSFS--GTEIFGKTVGVVGLGRIGQLVAQRIAAFGAYVVAYDPYVSPARAAQLGIELLS-LDDLLARADFISVHLPKTPETAGLIDKEALAKTKPGVIIVNAARGGLVDEAALADAITGGHVRAAGLDVFATEPCTDSPLFEL 271
BLAST of FC930953 vs. ExPASy Swiss-Prot
Match: SERA_MYCBO (D-3-phosphoglycerate dehydrogenase OS=Mycobacterium bovis GN=serA PE=3 SV=1) HSP 1 Score: 83.5741 bits (205), Expect = 1.120e-15 Identity = 61/208 (29.33%), Postives = 89/208 (42.79%), Query Frame = 1 Query: 82 EIVVGSTAGIDHVDLQECRRRGILVTNAGNAFSEDGAXXXXXXXXXXXXXXXXXXXXXRNGLWPDHGAYPLGSTLGGKRVGIVGLGSIGSEVAKRLVPFGCSIA----YTSRKKKPGVSYPFYANVSGLAADSDVLIVCCALTEETHHMINKDVMTALGKEGVIINVGRGALIDEKELVHFLVRGELGGAGLDVFEDEPHVPKELLTL 693 +IV + G+D+VD+ RG+LV NA + A R W G+ + GK VG+VGLG IG VA+R+ FG + Y S + + + + L A +D + V T ET +I+K+ + +I+N RG L+DE L + G + AGLDVF EP L L Sbjct: 67 KIVARAGVGLDNVDVDAATARGVLVVNAPTSNIHSAAEHALALLLAASRQIPAADASLREHTWKRSSFS--GTEIFGKTVGVVGLGRIGQLVAQRIAAFGAYVVAYDPYVSPARAAQLGIELLS-LDDLLARADFISVHLPKTPETAGLIDKEALAKTKPGVIIVNAARGGLVDEAALADAITGGHVRAAGLDVFATEPCTDSPLFEL 271
BLAST of FC930953 vs. ExPASy Swiss-Prot
Match: GHRB_ECOLU (Glyoxylate/hydroxypyruvate reductase B OS=Escherichia coli O17:K52:H18 (strain UMN026 / ExPEC) GN=ghrB PE=3 SV=1) HSP 1 Score: 83.5741 bits (205), Expect = 1.120e-15 Identity = 56/194 (28.87%), Postives = 87/194 (44.85%), Query Frame = 1 Query: 100 TAGIDHVDLQECRRRGILVTNAGNAFSEDGAXXXXXXXXXXXXXXXXXXXXXRNGLWPDH-GAYPLGSTLGGKRVGIVGLGSIGSEVAKRL-VPFGCSIAYTSRKKKPGVSYPF---YANVSGLAADSDVLIVCCALTEETHHMINKDVMTALGKEGVIINVGRGALIDEKELVHFLVRGELGGAGLDVFEDEP 666 + G D+ D+ R IL+ + +E A + G W G G+ + K +GIVG+G IG +A+R F I Y +R+ F Y ++ L +SD + + LT+ET+H+ + + + IN GRG ++DE L+ L +GE+ AGLDVFE EP Sbjct: 74 SVGYDNFDVDALTARKILLMHTPTVLTETVADTLMALVLSTARRVVEVAERVKAGEWTASIGPDWYGTDVHHKTLGIVGMGRIGMALAQRAHFGFNMPILYNARRHHKEAEERFNARYCDLDSLLQESDFVCLILPLTDETYHLFGAEQFGKMKSSAIFINAGRGPVVDENALIAALQKGEIHAAGLDVFEQEP 267 The following BLAST results are available for this feature:
BLAST of FC930953 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 155
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Sequences
The
following sequences are available for this feature:
EST sequence >FC930953 ID=FC930953; Name=FC930953; organism=Citrus clementina; type=EST; length=693bpback to top |