FC930965
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC930965 vs. ExPASy Swiss-Prot
Match: HEM1_TRIEI (Glutamyl-tRNA reductase OS=Trichodesmium erythraeum (strain IMS101) GN=hemA PE=3 SV=1) HSP 1 Score: 145.976 bits (367), Expect = 1.541e-35 Identity = 83/210 (39.52%), Postives = 126/210 (60.00%), Query Frame = 1 Query: 1 GQGVVGFGRNISGLFKHAISVGKRVRTETNIXXXXXXXXXXXXELALMKLPESSHATARMLVIGAGKMGKLVIKHLVAKGCTKMVVVNRSEERVAAIREELNGVEIIYKPLSEMLSCAADADVVFTSTASEAPLFLKDHVQDLPPVEAAVGGLR--LFIDISVPRNVGSCVADVETARVYNVDDLKEVVAANKEDRLRKAMEAQAIISEE 624 GQ G GR ++ LFK A++ GKRVRTET+I ELA MKL + S+ ++ ++GAGKM KL+++HL+AKG K+ ++NRS R + I + EM+ ++D+VFTSTA+ + + D +E + L+ + +DISVPRN+G+ V+++ R +NVDDLK VVA N+E R + AMEA+ ++ EE Sbjct: 128 GQKYKGIGRILNRLFKQAVTAGKRVRTETSIGTGAVSVSSAAVELAQMKLEDLSNY--QVAIVGAGKMSKLLVQHLLAKGANKISIINRSVGRAQDLANSFKDANIKVYSMLEMVQVIGESDLVFTSTAAT------ELILDKAKLETILDPLKPLMLVDISVPRNIGNDVSELPNVRCFNVDDLKAVVAQNRESRRQMAMEAEVLLEEE 329 HSP 2 Score: 25.0238 bits (53), Expect = 1.541e-35 Identity = 10/19 (52.63%), Postives = 13/19 (68.42%), Query Frame = 3 Query: 624 IKQFAAWRDSLETVPTIKN 680 ++ F W SLETVPTI + Sbjct: 330 VEAFDVWWKSLETVPTINS 348
BLAST of FC930965 vs. ExPASy Swiss-Prot
Match: HEM1_CYAP7 (Glutamyl-tRNA reductase OS=Cyanothece sp. (strain PCC 7424) GN=hemA PE=3 SV=1) HSP 1 Score: 148.673 bits (374), Expect = 2.835e-35 Identity = 83/209 (39.71%), Postives = 126/209 (60.29%), Query Frame = 1 Query: 16 GFGRNISGLFKHAISVGKRVRTETNIXXXXXXXXXXXXELALMKLPESSHATARMLVIGAGKMGKLVIKHLVAKGCTKMVVVNRSEERVAAIREELNGVEIIYKPLSEMLSCAADADVVFTSTASEAPLFLKDHVQDLPPVEAAVGGLRLFIDISVPRNVGSCVADVETARVYNVDDLKEVVAANKEDRLRKAMEAQAIISEESNSLQL 642 G GR + LFK A++ GKRVR+ET+I ELA MK+ + R+ +IGAGKM +L+++HL++KG +K+ +VNRS R + ++ PL EM++ + +D+VFTST + P+ + +++ + AV + +DISVPRNV + V +E + YNVDDLK VVAAN+E R R A EA+ ++ EE S +L Sbjct: 133 GIGRLLDRLFKQAMTAGKRVRSETSIGTGAVSISSAAVELAQMKVIDI--CVCRVTIIGAGKMSRLLVQHLLSKGVSKIAIVNRSLRRAQELAGLFPEAQLQLHPLEEMINAVSVSDIVFTSTGATEPILNRSNLESI----IAVNQSLMLVDISVPRNVDADVQQLEQIQSYNVDDLKAVVAANQESRRRLAQEAEGLLEEEVESFEL 335
BLAST of FC930965 vs. ExPASy Swiss-Prot
Match: HEM1_CYAP4 (Glutamyl-tRNA reductase OS=Cyanothece sp. (strain PCC 7425 / ATCC 29141) GN=hemA PE=3 SV=1) HSP 1 Score: 145.591 bits (366), Expect = 2.400e-34 Identity = 84/220 (38.18%), Postives = 129/220 (58.64%), Query Frame = 1 Query: 1 GQGVVGFGRNISGLFKHAISVGKRVRTETNIXXXXXXXXXXXXELALMKLPESSHATARMLVIGAGKMGKLVIKHLVAKGCTKMVVVNRSEERVAAIREELNGVEIIYKPLSEMLSCAADADVVFTSTASEAPLFLKDHVQDLPPVEAAVGGLRLFIDISVPRNVGSCVADVETARVYNVDDLKEVVAANKEDRLRKAMEAQAIISEESNSLQLGGIHWR 660 GQ G G ++ LFK AI+ GKRVRTET+I ELA +K P A R+ V+GAGKM +LV++HL+AKG ++ ++NRS ER + + + + L+E+ + D++FT T++ PL + ++ + V ++ + IDI+VPRNV + V ++E +V+NVDDLK VVA N+E R AMEA+A++ EE + + WR Sbjct: 128 GQQYNGIGTILNRLFKQAITAGKRVRTETSIGTGAVSISSAAVELAQLKTP--CLADCRVAVLGAGKMSRLVVQHLLAKGANQIAILNRSTERARELANQFSEASLQIHSLAELFNVITRYDLIFTGTSATEPLLDRSKLEPVLEVNQSL----MIIDIAVPRNVHANVNELEQVQVFNVDDLKAVVAQNQESRRAMAMEAEALLEEELTAFD---VWWR 338
BLAST of FC930965 vs. ExPASy Swiss-Prot
Match: HEM1_SYNP2 (Glutamyl-tRNA reductase OS=Synechococcus sp. (strain ATCC 27264 / PCC 7002 / PR-6) GN=hemA PE=3 SV=1) HSP 1 Score: 141.739 bits (356), Expect = 3.676e-34 Identity = 83/208 (39.90%), Postives = 124/208 (59.62%), Query Frame = 1 Query: 1 GQGVVGFGRNISGLFKHAISVGKRVRTETNIXXXXXXXXXXXXELALMKLPESSHATARMLVIGAGKMGKLVIKHLVAKGCTKMVVVNRSEERVAAIREELNGVEIIYKPLSEMLSCAADADVVFTSTASEAPLFLKDHVQDLPPVEAAVGGLRLFIDISVPRNVGSCVADVETARVYNVDDLKEVVAANKEDRLRKAMEAQAIISEE 624 GQ G GR + +FK AI+ GKRVR+ETNI ELA MK+ + S+ ++ +IGAGKM +L+++HLV+KG + +VNRSE + ++ V++ + L EML+ AD+VFTST + P+ + +++L + IDISVP NV + V ++ R+YNVD LKEVVA N+ R + A EA+A++ EE Sbjct: 128 GQQHKGLGRLLDRMFKRAITAGKRVRSETNIGTGAVSISSAAVELAQMKVKDLSNQ--KIAIIGAGKMSRLLVQHLVSKGAEDITIVNRSERGARDLAKKFPDVDLQLELLPEMLNVVEQADIVFTSTGATEPILDRAKLENLDL------HTLILIDISVPLNVAADVEEIAGVRLYNVDALKEVVAQNQASRRKMAEEAEALLEEE 327 HSP 2 Score: 24.6386 bits (52), Expect = 3.676e-34 Identity = 9/19 (47.37%), Postives = 13/19 (68.42%), Query Frame = 3 Query: 624 IKQFAAWRDSLETVPTIKN 680 ++ + W SLETVPTI + Sbjct: 328 VENYIQWWQSLETVPTISS 346
BLAST of FC930965 vs. ExPASy Swiss-Prot
Match: HEM1_CYAP8 (Glutamyl-tRNA reductase OS=Cyanothece sp. (strain PCC 8801) GN=hemA PE=3 SV=1) HSP 1 Score: 141.739 bits (356), Expect = 6.234e-34 Identity = 88/214 (41.12%), Postives = 119/214 (55.61%), Query Frame = 1 Query: 1 GQGVVGFGRNISGLFKHAISVGKRVRTETNIXXXXXXXXXXXXELALMKLPESSHATARMLVIGAGKMGKLVIKHLVAKGCTKMVVVNRSEERVAAIREELNGVEIIYKPLSEMLSCAADADVVFTSTASEAPLFLKDHVQDLPPVEAAVGGLRLFIDISVPRNVGSCVADVETARVYNVDDLKEVVAANKEDRLRKAMEAQAIISEESNSLQL 642 GQ G GR + LFK AI+ GKRVR+ETNI ELA K + A R+ +IGAGKM +L+++HL++KG T + +VNRS R + + + + L EM+ A + +VFTSTA+ P+ H ++L L LF DISVPRNV S V +E YNVDDLK VVA N E R + A EA+ ++ EE + L Sbjct: 128 GQKYKGIGRLLDRLFKQAITAGKRVRSETNIGTGAVSISSAAVELAQTKAEDL--ANRRISIIGAGKMARLLVQHLLSKGATDITIVNRSHHRAQELAAQFPQASLNLQLLPEMMQVVASSHIVFTSTAATEPIL---HRENLTAALDPNHALMLF-DISVPRNVASDVHGMEGIESYNVDDLKAVVAQNYESRRQMAQEAEGLLEEEVEAFDL 335 HSP 2 Score: 23.8682 bits (50), Expect = 6.234e-34 Identity = 10/17 (58.82%), Postives = 12/17 (70.59%), Query Frame = 3 Query: 624 IKQFAAWRDSLETVPTI 674 ++ F W SLETVPTI Sbjct: 330 VEAFDLWWRSLETVPTI 346
BLAST of FC930965 vs. ExPASy Swiss-Prot
Match: HEM1_NOSP7 (Glutamyl-tRNA reductase OS=Nostoc punctiforme (strain ATCC 29133 / PCC 73102) GN=hemA PE=3 SV=1) HSP 1 Score: 143.665 bits (361), Expect = 9.119e-34 Identity = 84/220 (38.18%), Postives = 133/220 (60.45%), Query Frame = 1 Query: 1 GQGVVGFGRNISGLFKHAISVGKRVRTETNIXXXXXXXXXXXXELALMKLPESSHATARMLVIGAGKMGKLVIKHLVAKGCTKMVVVNRSEERVAAIREELNGVEIIYKPLSEMLSCAADADVVFTSTASEAPLFLKDHVQDLPPVEAAVGGLRLFIDISVPRNVGSCVADVETARVYNVDDLKEVVAANKEDRLRKAMEAQAIISEESNSLQLGGIHWR 660 GQ G ++ LFK A++ GKRVRTET+I ELA +K+ ++ A R++++GAGKM +L+++HL++KG ++ +VNRS +R + + I PLSEM+S AD+D+VFTST++ P+ + ++ + V+ ++ + DISVPRNV + V ++E + +NVDDLK VVA N E R + A EA+ ++ EE + I WR Sbjct: 128 GQQYNGIKTILNRLFKQALTAGKRVRTETSIGTGAVSISSAAVELAQIKV--ANLAACRVVILGAGKMSRLLVQHLISKGAVEISIVNRSRDRAQELAKLFPQQPIKIHPLSEMMSVIADSDLVFTSTSATEPILDRVKLEMVLEVQRSL----MLFDISVPRNVHADVNELENVQAFNVDDLKAVVAQNYESRRKIAQEAEKLLEEEVEAFD---IWWR 338
BLAST of FC930965 vs. ExPASy Swiss-Prot
Match: HEM1_ACAM1 (Glutamyl-tRNA reductase OS=Acaryochloris marina (strain MBIC 11017) GN=hemA PE=3 SV=1) HSP 1 Score: 143.28 bits (360), Expect = 1.191e-33 Identity = 85/215 (39.53%), Postives = 128/215 (59.53%), Query Frame = 1 Query: 16 GFGRNISGLFKHAISVGKRVRTETNIXXXXXXXXXXXXELALMKLPESSHATARMLVIGAGKMGKLVIKHLVAKGCTKMVVVNRSEERVAAIREELNGVEIIYKPLSEMLSCAADADVVFTSTASEAPLFLKDHVQDLPPVEAAVGGLRLFIDISVPRNVGSCVADVETARVYNVDDLKEVVAANKEDRLRKAMEAQAIISEESNSLQLGGIHWR 660 G G ++ LFK AIS GKRVRTET+I ELA +K + S R+ +IGAGKM +L++KHL++KG ++ ++NRS +R + ++ G ++ L++M + ++D++FTSTAS PL +D L P+ +F DISVPRNV S V ++ +NVDDLK VVA N+E R + A+EA++++ EE S + WR Sbjct: 133 GAGPILNRLFKQAISAGKRVRTETSIGTGAVSISSAAVELAQIKTEDLS--AHRVAIIGAGKMSRLLVKHLLSKGANQIAILNRSLKRAEQLADQFQGADLKLHTLADMQAVLTESDLIFTSTASTEPLLDRD---ILEPIVCDRQSCMIF-DISVPRNVHSNVNELSQVHAFNVDDLKAVVAQNQESRRQMALEAESLLEEEVASFD---VWWR 338
BLAST of FC930965 vs. ExPASy Swiss-Prot
Match: HEM1_SYNY3 (Glutamyl-tRNA reductase OS=Synechocystis sp. (strain PCC 6803) GN=hemA PE=3 SV=1) HSP 1 Score: 139.428 bits (350), Expect = 3.043e-33 Identity = 82/214 (38.32%), Postives = 123/214 (57.48%), Query Frame = 1 Query: 1 GQGVVGFGRNISGLFKHAISVGKRVRTETNIXXXXXXXXXXXXELALMKLPESSHATARMLVIGAGKMGKLVIKHLVAKGCTKMVVVNRSEERVAAIREELNGVEIIYKPLSEMLSCAADADVVFTSTASEAPLFLKDHVQDLPPVEAAVGGLRLFIDISVPRNVGSCVADVETARVYNVDDLKEVVAANKEDRLRKAMEAQAIISEESNSLQL 642 GQ G GR + LFK AI+ G+RVRTET+I EL ++ SS T ++IGAGKM L++KHL+AKG T + +VNRS+ R + + ++ PL++M + A D+VFTST + P+ +++ ++ + +DISVPRNV + V +E R +NVDDLKEVVA N+ R + A +A+A++ EE + L Sbjct: 128 GQKYKGVGRLLDRLFKQAITAGRRVRTETDIGTGAVSISSAAVELVHRQVDLSSQKT---VIIGAGKMACLLVKHLLAKGATDITIVNRSQRRSQDLANQFPQAQLTLCPLTDMFTAIAAGDIVFTSTGATEPILNCENLTGCVINRKSL----MLVDISVPRNVAADVHAMEQVRAFNVDDLKEVVAQNQASRRQMARQAEALLEEEIAAFDL 334 HSP 2 Score: 23.8682 bits (50), Expect = 3.043e-33 Identity = 11/19 (57.89%), Postives = 12/19 (63.16%), Query Frame = 3 Query: 624 IKQFAAWRDSLETVPTIKN 680 I F W SLETVPTI + Sbjct: 329 IAAFDLWWRSLETVPTISS 347
BLAST of FC930965 vs. ExPASy Swiss-Prot
Match: HEM1_MICAN (Glutamyl-tRNA reductase OS=Microcystis aeruginosa (strain NIES-843) GN=hemA PE=3 SV=1) HSP 1 Score: 135.961 bits (341), Expect = 1.901e-31 Identity = 76/201 (37.81%), Postives = 120/201 (59.70%), Query Frame = 1 Query: 40 LFKHAISVGKRVRTETNIXXXXXXXXXXXXELALMKLPESSHATARMLVIGAGKMGKLVIKHLVAKGCTKMVVVNRSEERVAAIREELNGVEIIYKPLSEMLSCAADADVVFTSTASEAPLFLKDHVQDLPPVEAAVGGLRLFIDISVPRNVGSCVADVETARVYNVDDLKEVVAANKEDRLRKAMEAQAIISEESNSLQL 642 LFK A++ GKRVRTET+I ELA K+ + S + ++ +IGAGKM +L++ HL+AKG ++ ++NRS+ R + E + + L EM++ A +D+VFTST + P+ K + ++ + IDISVPRNV + V ++ + +NVDDLK VVAAN+E R + A EA+A++ +E + +L Sbjct: 141 LFKQAMTAGKRVRTETSIGTGAVSISSAAVELAHAKVTDLS--SKKIAIIGAGKMSRLLVTHLLAKGSQQIAIINRSQRRAQELAREFPHLPLQLYGLEEMMTTVAASDIVFTSTGATEPILTKTLLTEV----TITANSLMLIDISVPRNVHTDVKELAQVQAFNVDDLKAVVAANQESRRQMAREAEALLEQEVEAFEL 335
BLAST of FC930965 vs. ExPASy Swiss-Prot
Match: HEM1_SYNP6 (Glutamyl-tRNA reductase OS=Synechococcus sp. (strain ATCC 27144 / PCC 6301 / SAUG 1402/1) GN=hemA PE=3 SV=1) HSP 1 Score: 135.191 bits (339), Expect = 3.243e-31 Identity = 79/215 (36.74%), Postives = 130/215 (60.47%), Query Frame = 1 Query: 1 GQGVVGFGRNISGLFKHAISVGKRVRTETNIXXXXXXXXXXXXELALMKL------PESSHATARMLVIGAGKMGKLVIKHLVAKGCTKMVVVNRSEERVAAIREELNG-VEIIYKPLSEMLSCAADADVVFTSTASEAPLFLKDHVQDLPPVEAAVGGLRLFIDISVPRNVGSCVADVETARVYNVDDLKEVVAANKEDRLRKAMEAQAIISEE 624 GQ G GR ++ L K A++ GKRVRTET+I ELA +K+ + + A R+L++GAGKM +L+++HL+AKG + ++NR+ R + ++ G ++I LS +++ +AD+VFTST++ P+ + ++ + E + + IDI+VPRNV + V ++ + YNVDDL+EVVA N+E R + A EA+A++ EE Sbjct: 128 GQQYEGVGRILNRLLKQAVTAGKRVRTETSIGTGAVSISSAAVELAQLKVIARDDRSDGNLAGQRVLILGAGKMSRLLVQHLIAKGADTIQILNRTLGRAEELAKQYGGDLQIQVGLLSGLMNAIVEADIVFTSTSATDPILDRAKLEMVLAPEQRL----MLIDIAVPRNVAADVVELTSVESYNVDDLREVVAQNQESRRKLAEEAEALLEEE 338 The following BLAST results are available for this feature:
BLAST of FC930965 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 465
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >FC930965 ID=FC930965; Name=FC930965; organism=Citrus clementina; type=EST; length=694bpback to top |