FC930965
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC930965 vs. ExPASy Swiss-Prot
Match: HEM1_EDWI9 (Glutamyl-tRNA reductase OS=Edwardsiella ictaluri (strain 93-146) GN=hemA PE=3 SV=1) HSP 1 Score: 102.064 bits (253), Expect = 3.043e-21 Identity = 68/199 (34.17%), Postives = 109/199 (54.77%), Query Frame = 1 Query: 28 NISGLFKHAISVGKRVRTETNIXXXXXXXXXXXXELALMKLPESSHATARMLVIGAGKMGKLVIKHLVAKGCTKMVVVNRSEERVAAIREELNGVEIIYKPLSEMLSCAADADVVFTSTASEAPLFLKDHVQDLPPVEAAVGGLRLFIDISVPRNVGSCVADVETARVYNVDDLKEVVAANKEDRLRKAMEAQAIISEE 624 ++ LF+ SV KRVRTET I LA S A +L++GAG+ +LV +HL M++ NR+ ER ++ +E+ G E+I PL+++ + ADAD+V +STAS P+ K V+ ++A L +DI+VPR++ V D+ A +Y+VDDL ++ N R A++A+ I+ +E Sbjct: 137 DLERLFQKTFSVAKRVRTETEIGTSAVSVAFAACTLARQIF--ESLARLNVLLVGAGETIELVARHLHQHQVQHMMIANRTRERAQSLADEV-GAEVI--PLADIDARLADADIVISSTASPLPIIGKGMVERA--LKARRNRPMLLVDIAVPRDIEPEVGDLANAYLYSVDDLHAIIQGNMAQRQEAAVQAEHIVQQE 328
BLAST of FC930965 vs. ExPASy Swiss-Prot
Match: HEM1_GEOTN (Glutamyl-tRNA reductase OS=Geobacillus thermodenitrificans (strain NG80-2) GN=hemA PE=3 SV=1) HSP 1 Score: 101.679 bits (252), Expect = 3.974e-21 Identity = 67/203 (33.00%), Postives = 110/203 (54.19%), Query Frame = 1 Query: 22 GRNISGLFKHAISVGKRVRTETNIXXXXXXXXXXXXELALMKLPESSHATAR-MLVIGAGKMGKLVIKHLVAKGCTKMVVVNRSEERVAAIREELNGVEIIYKPLSEMLSCAADADVVFTSTASEAPLFLKDHVQDLPPVEAAVGGLRLF-IDISVPRNVGSCVADVETARVYNVDDLKEVVAANKEDRLRKAMEAQAIISEE 624 G ++ LFK A++ KR +ET I ELA H + +L+IGAGKMG L ++L G K+ VVNR+ E+ + + +G K L E+ +AD+V +ST ++ + K+ ++ P+E G LF +DI+VPR++ +A++ET +Y++DDL++VVAAN +R + A + +I E Sbjct: 135 GTILNHLFKQAVTFAKRAHSETGIGAHAVSVSYAAVELAKKIF---GHLNGKHVLIIGAGKMGTLAAQNLYGNGVGKVTVVNRTLEKAKQLAAQFDGEA---KSLGELSCALLEADIVISSTGAKGYMLTKE---EMAPLEKMRKGRPLFMVDIAVPRDLDPALAELETVFLYDIDDLQDVVAANLAERQKAAALIEEMIEGE 328
BLAST of FC930965 vs. ExPASy Swiss-Prot
Match: HEM1_BACWK (Glutamyl-tRNA reductase OS=Bacillus weihenstephanensis (strain KBAB4) GN=hemA PE=3 SV=1) HSP 1 Score: 101.679 bits (252), Expect = 3.974e-21 Identity = 66/208 (31.73%), Postives = 111/208 (53.37%), Query Frame = 1 Query: 4 QGVVGFGRNISGLFKHAISVGKRVRTETNIXXXXXXXXXXXXELALMKLPESSHATARMLVIGAGKMGKLVIKHLVAKGCTKMVVVNRSEERVAAIREELNGVEIIYKPLSEMLSCAADADVVFTSTASEAPLFLKDHVQDLPPVEAAVGGLRLF-IDISVPRNVGSCVADVETARVYNVDDLKEVVAANKEDRLRKAMEAQAIISEE 624 Q V G + LFK +++ KR +ET I EL K +L++GAGKMG+L +++L G K+ V+NR+ + + E+ G KPLSE+ +AD++ +ST + + K+ + VE G LF +DI+VPR++ + ++E + +Y++DDL+ VV AN+ +RL++A + Q +I EE Sbjct: 129 QQVKATGTIFNELFKQVVTLAKRAHSETTIGESAMSVSYAAVELG--KKIFGDLTDCHVLILGAGKMGELALQNLYGSGARKVTVMNRTLTKAEVMAEKYMGHA---KPLSELQCALLEADILISSTGASEYVITKEM---MTKVERMRSGRPLFMVDIAVPRDIDPAIDELEGSFLYDIDDLQGVVEANRAERLKEAEKIQFMIEEE 328
BLAST of FC930965 vs. ExPASy Swiss-Prot
Match: HEM1_SHESW (Glutamyl-tRNA reductase OS=Shewanella sp. (strain W3-18-1) GN=hemA PE=3 SV=1) HSP 1 Score: 101.293 bits (251), Expect = 5.190e-21 Identity = 71/199 (35.68%), Postives = 103/199 (51.76%), Query Frame = 1 Query: 31 ISGLFKHAISVGKRVRTETNIXXXXXXXXXXXXELALMKLPESSHATARMLVIGAGKMGKLVIKHLVAKGCTKMVVVNRSEERVAAIREELNGVEIIYKPLSEMLSCAADADVVFTSTASEAPLFLKDHVQDLPPVEAAVGGLRLFIDISVPRNVGSCVADVETARVYNVDDLKEVVAANKEDRLRKAMEAQAIISEES 627 I LF++ SV K+VRTET I +A K SS +T ++L+IGAG+ +LV KHL G MVV NR+ ER + EE I + + L AD+V +STAS P+ K V+ ++ L +DI+VPR++ VAD++ A +Y VDDL ++ N R A +A+ I E+S Sbjct: 134 IDRLFQNTFSVAKKVRTETEIGAAAVSVAFAAVSMA--KHIFSSLSTTKVLLIGAGETIELVAKHLKDNGVASMVVANRTLERAQGMCEEFGATAITLAQIPDYLP---KADIVISSTASPLPILGKGMVEKA--LKQRRHQPMLLVDIAVPRDIEPEVADLDDAFLYTVDDLHSIIEQNMASRKEAAEQAELITEEQS 325
BLAST of FC930965 vs. ExPASy Swiss-Prot
Match: HEM1_SHEPC (Glutamyl-tRNA reductase OS=Shewanella putrefaciens (strain CN-32 / ATCC BAA-453) GN=hemA PE=3 SV=1) HSP 1 Score: 101.293 bits (251), Expect = 5.190e-21 Identity = 71/199 (35.68%), Postives = 103/199 (51.76%), Query Frame = 1 Query: 31 ISGLFKHAISVGKRVRTETNIXXXXXXXXXXXXELALMKLPESSHATARMLVIGAGKMGKLVIKHLVAKGCTKMVVVNRSEERVAAIREELNGVEIIYKPLSEMLSCAADADVVFTSTASEAPLFLKDHVQDLPPVEAAVGGLRLFIDISVPRNVGSCVADVETARVYNVDDLKEVVAANKEDRLRKAMEAQAIISEES 627 I LF++ SV K+VRTET I +A K SS +T ++L+IGAG+ +LV KHL G MVV NR+ ER + EE I + + L AD+V +STAS P+ K V+ ++ L +DI+VPR++ VAD++ A +Y VDDL ++ N R A +A+ I E+S Sbjct: 134 IDRLFQNTFSVAKKVRTETEIGAAAVSVAFAAVSMA--KHIFSSLSTTKVLLIGAGETIELVAKHLKDNGVASMVVANRTLERAQGMCEEFGATAITLAQIPDYLP---KADIVISSTASPLPILGKGMVEKA--LKQRRHQPMLLVDIAVPRDIEPEVADLDDAFLYTVDDLHSIIEQNMASRKEAAEQAELITEEQS 325
BLAST of FC930965 vs. ExPASy Swiss-Prot
Match: HEM1_KLEP7 (Glutamyl-tRNA reductase OS=Klebsiella pneumoniae subsp. pneumoniae (strain ATCC 700721 / MGH 78578) GN=hemA PE=3 SV=1) HSP 1 Score: 101.293 bits (251), Expect = 5.190e-21 Identity = 68/197 (34.52%), Postives = 110/197 (55.84%), Query Frame = 1 Query: 40 LFKHAISVGKRVRTETNIXXXXXXXXXXXXELALMKLPESSHATARMLVIGAGKMGKLVIKHLVAKGCTKMVVVNRSEERVAAIREELNGVEIIYKPLSEMLSCAADADVVFTSTASEAPLFLKDHVQDLPPVEAAVGGLRLFIDISVPRNVGSCVADVETARVYNVDDLKEVVAANKEDRLRKAMEAQAIISEESN 630 +F+ + SV KRVRTET+I LA S T +L++GAG+ +LV +HL KMV+ NR+ ER A+ EE+ G E+I LS++ +AD++ +STAS P+ K V+ ++A L +DI+VPR+V V + A +Y+VDDL+ ++ N R A++A++I+ +E++ Sbjct: 141 MFQKSFSVAKRVRTETDIGASAVSVAFAACTLARQIFESLSSVT--VLLVGAGETIELVARHLREHHVRKMVIANRTRERAQALAEEV-GAEVI--ALSDIDERLKEADIIISSTASPLPIIGKGMVERA--LKARRNQPMLLVDIAVPRDVEPEVGKLANAYLYSVDDLQNIIQHNLAQRKAAAVQAESIVEQETS 330
BLAST of FC930965 vs. ExPASy Swiss-Prot
Match: HEM1_GEOMG (Glutamyl-tRNA reductase OS=Geobacter metallireducens (strain GS-15 / ATCC 53774 / DSM 7210) GN=hemA PE=3 SV=1) HSP 1 Score: 101.293 bits (251), Expect = 5.190e-21 Identity = 68/191 (35.60%), Postives = 101/191 (52.88%), Query Frame = 1 Query: 52 AISVGKRVRTETNIXXXXXXXXXXXXELALMKLPESSHATARMLVIGAGKMGKLVIKHLVAKGCTKMVVVNRSEERVAAIREELNGVEIIYKPLSEMLSCAADADVVFTSTASEAPLFLKDHVQDLPPVEAAVGGLRLFIDISVPRNVGSCVADVETARVYNVDDLKEVVAANKEDRLRKAMEAQAIISEE 624 A SV KRVRTET I ELA S T +++IGAG+M +L KH + G ++V NR+ ER + EE G + + L + L AD+V +ST + + V+++ + FIDI+VPR++ V DVE +Y++DDL+ VVA+N + R +A +A+AII EE Sbjct: 145 AFSVAKRVRTETKIASSAVSVSFAAVELARKIFGNLSDKT--VMLIGAGEMCELAAKHFINNGVRGVMVTNRTYERAVKLAEEFEGKPVSFDDLFDQLH---KADIVLSSTGATQFIIKPKDVEEV--IRRRKLKPMFFIDIAVPRDIDPKVNDVENVYLYDMDDLQGVVASNLQQRAEEAKKAEAIIDEE 328
BLAST of FC930965 vs. ExPASy Swiss-Prot
Match: HEM1_SHELP (Glutamyl-tRNA reductase OS=Shewanella loihica (strain ATCC BAA-1088 / PV-4) GN=hemA PE=3 SV=1) HSP 1 Score: 100.523 bits (249), Expect = 8.853e-21 Identity = 67/197 (34.01%), Postives = 106/197 (53.81%), Query Frame = 1 Query: 40 LFKHAISVGKRVRTETNIXXXXXXXXXXXXELALMKLPESSHATARMLVIGAGKMGKLVIKHLVAKGCTKMVVVNRSEERVAAIREELNGVEIIYKPLSEMLSCAADADVVFTSTASEAPLFLKDHVQDLPPVEAAVGGLRLFIDISVPRNVGSCVADVETARVYNVDDLKEVVAANKEDRLRKAMEAQAIISEESN 630 LF++ SV K+VRTET I +A K S+ + ++L+IGAG+ +LV +HL G M+V NR+ R A+ EE I + + + L AD+V +STAS P+ K V+ ++ L +DI+VPR++ + VAD++ A +Y VDDL+ ++ N R A +A+ I+ EES+ Sbjct: 137 LFQNTFSVAKKVRTETEIGAAAVSVAFAAVSMA--KHIFSALSATKVLLIGAGETIELVARHLKDNGVDSMIVANRTISRAEAMCEEFGATAITLEQIPDFLP---KADIVISSTASPLPILGKGMVEKA--LKQRRHQPMLLVDIAVPRDIEAEVADLDDAFLYTVDDLQSIIEQNMASRREAAEKAELIVEEESH 326
BLAST of FC930965 vs. ExPASy Swiss-Prot
Match: HEM1_SHEB9 (Glutamyl-tRNA reductase OS=Shewanella baltica (strain OS195) GN=hemA PE=3 SV=1) HSP 1 Score: 100.523 bits (249), Expect = 8.853e-21 Identity = 70/199 (35.18%), Postives = 103/199 (51.76%), Query Frame = 1 Query: 31 ISGLFKHAISVGKRVRTETNIXXXXXXXXXXXXELALMKLPESSHATARMLVIGAGKMGKLVIKHLVAKGCTKMVVVNRSEERVAAIREELNGVEIIYKPLSEMLSCAADADVVFTSTASEAPLFLKDHVQDLPPVEAAVGGLRLFIDISVPRNVGSCVADVETARVYNVDDLKEVVAANKEDRLRKAMEAQAIISEES 627 I LF++ SV K+VRT+T I +A K SS +T ++L+IGAG+ +LV KHL G MVV NR+ ER + EE I + + L AD+V +STAS P+ K V+ ++ L +DI+VPR++ VAD++ A +Y VDDL ++ N R A +A+ I E+S Sbjct: 134 IDRLFQNTFSVAKKVRTDTEIGAAAVSVAFAAVSMA--KHIFSSISTTKVLLIGAGETIELVAKHLKDNGVASMVVANRTLERAQGMCEEFGATAITLAQIPDYLP---KADIVISSTASPLPILGKGMVEKA--LKQRRHQPMLLVDIAVPRDIEPEVADLDDAFLYTVDDLHSIIEQNMASRKEAAEQAEVITEEQS 325
BLAST of FC930965 vs. ExPASy Swiss-Prot
Match: HEM1_SHEB8 (Glutamyl-tRNA reductase OS=Shewanella baltica (strain OS185) GN=hemA PE=3 SV=1) HSP 1 Score: 100.523 bits (249), Expect = 8.853e-21 Identity = 70/199 (35.18%), Postives = 103/199 (51.76%), Query Frame = 1 Query: 31 ISGLFKHAISVGKRVRTETNIXXXXXXXXXXXXELALMKLPESSHATARMLVIGAGKMGKLVIKHLVAKGCTKMVVVNRSEERVAAIREELNGVEIIYKPLSEMLSCAADADVVFTSTASEAPLFLKDHVQDLPPVEAAVGGLRLFIDISVPRNVGSCVADVETARVYNVDDLKEVVAANKEDRLRKAMEAQAIISEES 627 I LF++ SV K+VRT+T I +A K SS +T ++L+IGAG+ +LV KHL G MVV NR+ ER + EE I + + L AD+V +STAS P+ K V+ ++ L +DI+VPR++ VAD++ A +Y VDDL ++ N R A +A+ I E+S Sbjct: 134 IDRLFQNTFSVAKKVRTDTEIGAAAVSVAFAAVSMA--KHIFSSISTTKVLLIGAGETIELVAKHLKDNGVASMVVANRTLERAQGMCEEFGATAITLAQIPDYLP---KADIVISSTASPLPILGKGMVEKA--LKQRRHQPMLLVDIAVPRDIEPEVADLDDAFLYTVDDLHSIIEQNMASRKEAAEQAEVITEEQS 325 The following BLAST results are available for this feature:
BLAST of FC930965 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 465
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Sequences
The
following sequences are available for this feature:
EST sequence >FC930965 ID=FC930965; Name=FC930965; organism=Citrus clementina; type=EST; length=694bpback to top |