FC930965
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC930965 vs. ExPASy Swiss-Prot
Match: HEM1_SHEB5 (Glutamyl-tRNA reductase OS=Shewanella baltica (strain OS155 / ATCC BAA-1091) GN=hemA PE=3 SV=1) HSP 1 Score: 100.523 bits (249), Expect = 8.853e-21 Identity = 70/199 (35.18%), Postives = 103/199 (51.76%), Query Frame = 1 Query: 31 ISGLFKHAISVGKRVRTETNIXXXXXXXXXXXXELALMKLPESSHATARMLVIGAGKMGKLVIKHLVAKGCTKMVVVNRSEERVAAIREELNGVEIIYKPLSEMLSCAADADVVFTSTASEAPLFLKDHVQDLPPVEAAVGGLRLFIDISVPRNVGSCVADVETARVYNVDDLKEVVAANKEDRLRKAMEAQAIISEES 627 I LF++ SV K+VRT+T I +A K SS +T ++L+IGAG+ +LV KHL G MVV NR+ ER + EE I + + L AD+V +STAS P+ K V+ ++ L +DI+VPR++ VAD++ A +Y VDDL ++ N R A +A+ I E+S Sbjct: 134 IDRLFQNTFSVAKKVRTDTEIGAAAVSVAFAAVSMA--KHIFSSISTTKVLLIGAGETIELVAKHLKDNGVASMVVANRTLERAQGMCEEFGATAITLAQIPDYLP---KADIVISSTASPLPILGKGMVEKA--LKQRRHQPMLLVDIAVPRDIEPEVADLDDAFLYTVDDLHSIIEQNMASRKEAAEQAEVITEEQS 325
BLAST of FC930965 vs. ExPASy Swiss-Prot
Match: HEM1_SHEB2 (Glutamyl-tRNA reductase OS=Shewanella baltica (strain OS223) GN=hemA PE=3 SV=1) HSP 1 Score: 100.523 bits (249), Expect = 8.853e-21 Identity = 70/199 (35.18%), Postives = 103/199 (51.76%), Query Frame = 1 Query: 31 ISGLFKHAISVGKRVRTETNIXXXXXXXXXXXXELALMKLPESSHATARMLVIGAGKMGKLVIKHLVAKGCTKMVVVNRSEERVAAIREELNGVEIIYKPLSEMLSCAADADVVFTSTASEAPLFLKDHVQDLPPVEAAVGGLRLFIDISVPRNVGSCVADVETARVYNVDDLKEVVAANKEDRLRKAMEAQAIISEES 627 I LF++ SV K+VRT+T I +A K SS +T ++L+IGAG+ +LV KHL G MVV NR+ ER + EE I + + L AD+V +STAS P+ K V+ ++ L +DI+VPR++ VAD++ A +Y VDDL ++ N R A +A+ I E+S Sbjct: 134 IDRLFQNTFSVAKKVRTDTEIGAAAVSVAFAAVSMA--KHIFSSISTTKVLLIGAGETIELVAKHLKDNGVASMVVANRTLERAQGMCEEFGATAITLAQIPDYLP---KADIVISSTASPLPILGKGMVEKA--LKQRRHQPMLLVDIAVPRDIEPEVADLDDAFLYTVDDLHSIIEQNMASRKEAAEQAEVITEEQS 325
BLAST of FC930965 vs. ExPASy Swiss-Prot
Match: HEM1_SHEAM (Glutamyl-tRNA reductase OS=Shewanella amazonensis (strain ATCC BAA-1098 / SB2B) GN=hemA PE=3 SV=1) HSP 1 Score: 100.523 bits (249), Expect = 8.853e-21 Identity = 69/196 (35.20%), Postives = 105/196 (53.57%), Query Frame = 1 Query: 40 LFKHAISVGKRVRTETNIXXXXXXXXXXXXELALMKLPESSHATARMLVIGAGKMGKLVIKHLVAKGCTKMVVVNRSEERVAAIREELNGVEIIYKPLSEMLSCAADADVVFTSTASEAPLFLKDHVQDLPPVEAAVGGLRLFIDISVPRNVGSCVADVETARVYNVDDLKEVVAANKEDRLRKAMEAQAIISEES 627 LF+ SV K+VRTET I +A K SS A+ ++L+IGAG+ +LV +HL G + MVV NR+ ER A+ EE I LS++ AD+V +STAS P+ K V+ ++ L +DI+VPR++ + V +++ A +Y VDDL+ ++ N R A +A+ I E+S Sbjct: 137 LFQSTFSVAKKVRTETEIGTAAVSVAFAAVSMA--KHIFSSLASTKVLLIGAGETIELVARHLKENGVSSMVVANRTVERAQAMCEEFGATAI---TLSQIPDFLPKADIVISSTASPLPILGKGMVE--KALKQRRHQPMLLVDIAVPRDIEAEVGELDDAFLYTVDDLQSIIEQNMASRKEAAEQAEVIAQEQS 325
BLAST of FC930965 vs. ExPASy Swiss-Prot
Match: HEM1_SERP5 (Glutamyl-tRNA reductase OS=Serratia proteamaculans (strain 568) GN=hemA PE=3 SV=1) HSP 1 Score: 100.523 bits (249), Expect = 8.853e-21 Identity = 70/206 (33.98%), Postives = 112/206 (54.37%), Query Frame = 1 Query: 22 GRNISG----LFKHAISVGKRVRTETNIXXXXXXXXXXXXELALMKLPESSHATARMLVIGAGKMGKLVIKHLVAKGCTKMVVVNRSEERVAAIREELNGVEIIYKPLSEMLSCAADADVVFTSTASEAPLFLKDHVQDLPPVEAAVGGLRLFIDISVPRNVGSCVADVETARVYNVDDLKEVVAANKEDRLRKAMEAQAIISEES 627 G+++SG LF+ + SV KRVRTET I LA S A +L++GAG+ +LV +HL M++ NR+ ER + +E+ G E+I P E+ ADAD++ +STAS P+ K V+ ++A L +DI+VPR++ V + A +Y+VDDL ++ +N R A++A++I+ +ES Sbjct: 131 GQSLSGELERLFQKSFSVAKRVRTETEIGASAVSVAFAACTLARQIF--ESLAELNVLLVGAGETIELVARHLREHKVRHMIIANRTRERAQLLADEV-GAEVITLP--EIDERLADADIIISSTASPLPIIGKGMVERA--LKARRNQPMLLVDIAVPRDIEPEVGKLANAYLYSVDDLHAIIQSNLAQRKAAAVQAESIVQQES 329
BLAST of FC930965 vs. ExPASy Swiss-Prot
Match: HEM1_PSEA6 (Glutamyl-tRNA reductase OS=Pseudoalteromonas atlantica (strain T6c / BAA-1087) GN=hemA PE=3 SV=1) HSP 1 Score: 100.523 bits (249), Expect = 8.853e-21 Identity = 72/211 (34.12%), Postives = 113/211 (53.55%), Query Frame = 1 Query: 40 LFKHAISVGKRVRTETNIXXXXXXXXXXXXELALMKLPESSHATARMLVIGAGKMGKLVIKHLVAKGCTKMVVVNRSEERVAAIREELNGVEIIYKPLSEMLSCAADADVVFTSTASEAPLFLKDHVQDLPPVEAAVGGLR----LFIDISVPRNVGSCVADVETARVYNVDDLKEVVAANKEDRLRKAMEAQAIISEESNSLQLGGIHWR 660 LF+ SV KRVR+ET I +LA K SS + +L+IGAG+ +LV KH+ +G K+ V NR+ R AI + L + L+++ + DAD+V +STAS+ P+ K V E A+ R +D++VPR++ + V +++ A +Y VDDL+++V N E R A++AQ +I E++ L WR Sbjct: 139 LFQQTFSVAKRVRSETEIGSNAVSVAYASVQLA--KHIFSSLKKSNVLLIGAGETIELVAKHMHEQGVKKLSVANRTLARAEAIAQPLGATTLT---LTQIPAHLKDADIVISSTASQLPILGKGLV------ERALKDRRHKPMFLVDLAVPRDIEAEVGELDDAYLYTVDDLQQIVEKNIESRQHAALQAQQMIEEQAQQYML----WR 334
BLAST of FC930965 vs. ExPASy Swiss-Prot
Match: HEM1_GEOLS (Glutamyl-tRNA reductase OS=Geobacter lovleyi (strain ATCC BAA-1151 / DSM 17278 / SZ) GN=hemA PE=3 SV=1) HSP 1 Score: 100.523 bits (249), Expect = 8.853e-21 Identity = 69/195 (35.38%), Postives = 103/195 (52.82%), Query Frame = 1 Query: 52 AISVGKRVRTETNIXXXXXXXXXXXXELALMKLPESSHATARMLVIGAGKMGKLVIKHLVAKGCTKMVVVNRSEERVAAIREELNGVEIIYKPLSEMLSCAADADVVFTSTASEAPLFLKDHVQDLPPVEAAVGGLRL----FIDISVPRNVGSCVADVETARVYNVDDLKEVVAANKEDRLRKAMEAQAIISEE 624 A SV KRVRTET I ELA + T +L+IGAG+M +L +H + G ++V NR+ ER + EE G I P E+ AD+V TST + + P +E + R+ IDI+VPR++ V +++ +Y++DDL++VVAAN E R ++A +A+AII+EE Sbjct: 145 AFSVAKRVRTETRIASSAVSVSFAAVELARKIFGNLTDKT--VLLIGAGEMCELAARHFLTNGAKGVMVTNRTFERAQRLAEEFGGEAI---PFDELFLHLHKADIVLTSTGAPHAIITP------PDLEEVIKRRRMRPMFLIDIAVPRDIDPAVNEMDAVYLYDMDDLQQVVAANLEGRKQEADKAEAIIAEE 328
BLAST of FC930965 vs. ExPASy Swiss-Prot
Match: HEM12_ACIBL (Glutamyl-tRNA reductase 2 OS=Acidobacteria bacterium (strain Ellin345) GN=hemA2 PE=3 SV=1) HSP 1 Score: 100.523 bits (249), Expect = 8.853e-21 Identity = 64/198 (32.32%), Postives = 105/198 (53.03%), Query Frame = 1 Query: 31 ISGLFKHAISVGKRVRTETNIXXXXXXXXXXXXELALMKLPESSHATARMLVIGAGKMGKLVIKHLVAKGCTKMVVVNRSEERVAAIREELNGVEIIYKPLSEMLSCAADADVVFTSTASEAPLFLKDHVQDLPPVEAAVGGLRLFIDISVPRNVGSCVADVETARVYNVDDLKEVVAANKEDRLRKAMEAQAIISEE 624 + L A +V KRVRT+T+I ELA K S + ++GAGKM +L +H VA G K+ V NR+ ER A ++ NG + P+ + AD+V +ST + +F K+H + + F+DI+VPR+V + + +++ VY++DDL++VV ++ DR +A A+AI++ E Sbjct: 135 LDALLTRAFAVAKRVRTDTSIASSSVSIASVAVELA--KKIFGSLQGRSVYIVGAGKMCELAARHFVAHGVEKIYVANRTYERGVAFAKKFNGEAV---PIEHLYETVDKADIVLSSTGAPIAIFRKEHGEKF--LSRRKNRPMFFLDIAVPRDVDAKMNELDGIFVYDIDDLQQVVHSHISDRKDEAAHAEAIVNAE 325
BLAST of FC930965 vs. ExPASy Swiss-Prot
Match: HEM1_SYNAS (Glutamyl-tRNA reductase OS=Syntrophus aciditrophicus (strain SB) GN=hemA PE=3 SV=2) HSP 1 Score: 100.138 bits (248), Expect = 1.156e-20 Identity = 61/198 (30.81%), Postives = 100/198 (50.51%), Query Frame = 1 Query: 31 ISGLFKHAISVGKRVRTETNIXXXXXXXXXXXXELALMKLPESSHATARMLVIGAGKMGKLVIKHLVAKGCTKMVVVNRSEERVAAIREELNGVEIIYKPLSEMLSCAADADVVFTSTASEAPLFLKDHVQDLPPVEAAVGGLRLFIDISVPRNVGSCVADVETARVYNVDDLKEVVAANKEDRLRKAMEAQAIISEE 624 ++ + HA V KRVRTET I ELA +L++GAG+M +L +HL+ +G + V NR+ R + E+ G ++ + + E+L D+V +ST + + +D V + IDI+VPR++ D++ +YN+D L+E+V N+ RLR+A +A+AII EE Sbjct: 140 LNRILHHAFQVAKRVRTETGIADNAVSVGYAAVELAKKIFGRLDGKV--ILLVGAGEMSELAARHLLKQGIKSIFVANRTHARALEMAEQFEGKAVVLEQVPEVLK---SVDIVISSTGASNYVLTRDMVA--AALRRRKNRFLFLIDIAVPRDIEPAAGDIDNVYLYNIDHLQELVDENRNHRLREAEKAEAIIEEE 330
BLAST of FC930965 vs. ExPASy Swiss-Prot
Match: HEM1_SHISS (Glutamyl-tRNA reductase OS=Shigella sonnei (strain Ss046) GN=hemA PE=3 SV=1) HSP 1 Score: 100.138 bits (248), Expect = 1.156e-20 Identity = 66/197 (33.50%), Postives = 111/197 (56.35%), Query Frame = 1 Query: 40 LFKHAISVGKRVRTETNIXXXXXXXXXXXXELALMKLPESSHATARMLVIGAGKMGKLVIKHLVAKGCTKMVVVNRSEERVAAIREELNGVEIIYKPLSEMLSCAADADVVFTSTASEAPLFLKDHVQDLPPVEAAVGGLRLFIDISVPRNVGSCVADVETARVYNVDDLKEVVAANKEDRLRKAMEAQAIISEESN 630 +F+ + SV KRVRTET+I LA S +T +L++GAG+ +LV +HL KM++ NR+ ER + +E+ G E+I LSE+ +AD++ +STAS P+ K V+ +++ L +DI+VPR+V V + A +Y+VDDL+ +++ N R A+EA+ I+++E++ Sbjct: 141 MFQKSFSVAKRVRTETDIGASAVSVAFAACTLARQIF--ESLSTVTVLLVGAGETIELVARHLREHKVQKMIIANRTRERAQILADEV-GAEVI--ALSEIDERLREADIIISSTASPLPIIGKGMVERA--LKSRRNQPMLLVDIAVPRDVEPEVGKLANAYLYSVDDLQSIISHNLAQRKAAAVEAETIVAQETS 330
BLAST of FC930965 vs. ExPASy Swiss-Prot
Match: HEM1_SHIFL (Glutamyl-tRNA reductase OS=Shigella flexneri GN=hemA PE=3 SV=2) HSP 1 Score: 100.138 bits (248), Expect = 1.156e-20 Identity = 66/197 (33.50%), Postives = 111/197 (56.35%), Query Frame = 1 Query: 40 LFKHAISVGKRVRTETNIXXXXXXXXXXXXELALMKLPESSHATARMLVIGAGKMGKLVIKHLVAKGCTKMVVVNRSEERVAAIREELNGVEIIYKPLSEMLSCAADADVVFTSTASEAPLFLKDHVQDLPPVEAAVGGLRLFIDISVPRNVGSCVADVETARVYNVDDLKEVVAANKEDRLRKAMEAQAIISEESN 630 +F+ + SV KRVRTET+I LA S +T +L++GAG+ +LV +HL KM++ NR+ ER + +E+ G E+I LSE+ +AD++ +STAS P+ K V+ +++ L +DI+VPR+V V + A +Y+VDDL+ +++ N R A+EA+ I+++E++ Sbjct: 141 MFQKSFSVAKRVRTETDIGASAVSVAFAACTLARQIF--ESLSTVTVLLVGAGETIELVARHLREHKVQKMIIANRTRERAQILADEV-GAEVI--ALSEIDERLREADIIISSTASPLPIIGKGMVERA--LKSRRNQPMLLVDIAVPRDVEPEVGKLANAYLYSVDDLQSIISHNLAQRKAAAVEAETIVAQETS 330 The following BLAST results are available for this feature:
BLAST of FC930965 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 465
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Sequences
The
following sequences are available for this feature:
EST sequence >FC930965 ID=FC930965; Name=FC930965; organism=Citrus clementina; type=EST; length=694bpback to top |