FC930965
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC930965 vs. ExPASy Swiss-Prot
Match: HEM1_BACHD (Glutamyl-tRNA reductase OS=Bacillus halodurans GN=hemA PE=3 SV=1) HSP 1 Score: 100.138 bits (248), Expect = 1.156e-20 Identity = 60/201 (29.85%), Postives = 106/201 (52.74%), Query Frame = 1 Query: 22 GRNISGLFKHAISVGKRVRTETNIXXXXXXXXXXXXELALMKLPESSHATARMLVIGAGKMGKLVIKHLVAKGCTKMVVVNRSEERVAAIREELNGVEIIYKPLSEMLSCAADADVVFTSTASEAPLFLKDHVQDLPPVEAAVGGLRLFIDISVPRNVGSCVADVETARVYNVDDLKEVVAANKEDRLRKAMEAQAIISEE 624 G + LFK AI++ KR +ET+I EL K ++L++GAGKMG+L KHL + G ++ V+NR+ E+ A + + GV+ +P +E+ +AD++ +ST + + D V ++ G +DI+VPR++ +A + +Y++DDL+ +V N E+R +A + + +I EE Sbjct: 135 GSIFNHLFKQAITLAKRAHSETDIGQNAVSVSYAAVELG--KKIFDDFKGKQVLILGAGKMGELTAKHLHSNGAEQVTVINRTREKAAELAKRFLGVD---RPYNELTEAIVEADILISSTGATGYVVTSDMVSH--ALKKRKGRPLFMVDIAVPRDLDPALASHDDVYLYDIDDLQNIVQTNLEERRTEAEKIELLIEEE 328
BLAST of FC930965 vs. ExPASy Swiss-Prot
Match: HEM1_BACCR (Glutamyl-tRNA reductase OS=Bacillus cereus (strain ATCC 14579 / DSM 31) GN=hemA PE=3 SV=1) HSP 1 Score: 100.138 bits (248), Expect = 1.156e-20 Identity = 66/208 (31.73%), Postives = 111/208 (53.37%), Query Frame = 1 Query: 4 QGVVGFGRNISGLFKHAISVGKRVRTETNIXXXXXXXXXXXXELALMKLPESSHATARMLVIGAGKMGKLVIKHLVAKGCTKMVVVNRSEERVAAIREELNGVEIIYKPLSEMLSCAADADVVFTSTASEAPLFLKDHVQDLPPVEAAVGGLRLF-IDISVPRNVGSCVADVETARVYNVDDLKEVVAANKEDRLRKAMEAQAIISEE 624 Q V G + LFK I++ KR +ET I EL E + +L++GAGKMG+L +++L G K+ V+NR+ + + E+ G K LSE+ +AD++ +ST + + K+ + VE G LF +DI+VPR++ + ++E + +Y++DDL+ VV AN+ +RL++A + Q +I EE Sbjct: 129 QQVKATGTIFNELFKQVITLAKRAHSETTIGESAMSVSYAAVELGKKIFGELTDC--HVLILGAGKMGELALQNLYGSGARKVTVMNRTLSKAEVMAEKYMGHA---KSLSELQCALLEADILISSTGASEYVITKEM---MTKVEKMRSGRPLFMVDIAVPRDIDPAIDELEGSFLYDIDDLQGVVEANRAERLKEAEKIQFMIEEE 328
BLAST of FC930965 vs. ExPASy Swiss-Prot
Match: HEM1_BACC4 (Glutamyl-tRNA reductase OS=Bacillus cereus (strain B4264) GN=hemA PE=3 SV=1) HSP 1 Score: 100.138 bits (248), Expect = 1.156e-20 Identity = 66/208 (31.73%), Postives = 111/208 (53.37%), Query Frame = 1 Query: 4 QGVVGFGRNISGLFKHAISVGKRVRTETNIXXXXXXXXXXXXELALMKLPESSHATARMLVIGAGKMGKLVIKHLVAKGCTKMVVVNRSEERVAAIREELNGVEIIYKPLSEMLSCAADADVVFTSTASEAPLFLKDHVQDLPPVEAAVGGLRLF-IDISVPRNVGSCVADVETARVYNVDDLKEVVAANKEDRLRKAMEAQAIISEE 624 Q V G + LFK I++ KR +ET I EL E + +L++GAGKMG+L +++L G K+ V+NR+ + + E+ G K LSE+ +AD++ +ST + + K+ + VE G LF +DI+VPR++ + ++E + +Y++DDL+ VV AN+ +RL++A + Q +I EE Sbjct: 129 QQVKATGTIFNELFKQVITLAKRAHSETTIGESAMSVSYAAVELGKKIFGELTDC--HVLILGAGKMGELALQNLYGSGARKVTVMNRTLSKAEVMAEKYMGHA---KSLSELQCALLEADILISSTGASEYVITKEM---MTKVEKMRSGRPLFMVDIAVPRDIDPAIDELEGSFLYDIDDLQGVVEANRAERLKEAEKIQFMIEEE 328
BLAST of FC930965 vs. ExPASy Swiss-Prot
Match: HEM1_BACC2 (Glutamyl-tRNA reductase OS=Bacillus cereus (strain G9842) GN=hemA PE=3 SV=1) HSP 1 Score: 100.138 bits (248), Expect = 1.156e-20 Identity = 66/208 (31.73%), Postives = 111/208 (53.37%), Query Frame = 1 Query: 4 QGVVGFGRNISGLFKHAISVGKRVRTETNIXXXXXXXXXXXXELALMKLPESSHATARMLVIGAGKMGKLVIKHLVAKGCTKMVVVNRSEERVAAIREELNGVEIIYKPLSEMLSCAADADVVFTSTASEAPLFLKDHVQDLPPVEAAVGGLRLF-IDISVPRNVGSCVADVETARVYNVDDLKEVVAANKEDRLRKAMEAQAIISEE 624 Q V G + LFK I++ KR +ET I EL E + +L++GAGKMG+L +++L G K+ V+NR+ + + E+ G K LSE+ +AD++ +ST + + K+ + VE G LF +DI+VPR++ + ++E + +Y++DDL+ VV AN+ +RL++A + Q +I EE Sbjct: 129 QQVKATGTIFNELFKQVITLAKRAHSETTIGESAMSVSYAAVELGKKIFGELTDC--HVLILGAGKMGELALQNLYGSGARKVTVMNRTLSKAEVMAEKYMGHA---KSLSELQCALLEADILISSTGASEYVITKEM---MTKVEKMRSGRPLFMVDIAVPRDIDPAIDELEGSFLYDIDDLQGVVEANRAERLKEAEKIQFMIEEE 328
BLAST of FC930965 vs. ExPASy Swiss-Prot
Match: HEM1_YERPS (Glutamyl-tRNA reductase OS=Yersinia pseudotuberculosis GN=hemA PE=3 SV=2) HSP 1 Score: 99.7525 bits (247), Expect = 1.510e-20 Identity = 67/196 (34.18%), Postives = 106/196 (54.08%), Query Frame = 1 Query: 40 LFKHAISVGKRVRTETNIXXXXXXXXXXXXELALMKLPESSHATARMLVIGAGKMGKLVIKHLVAKGCTKMVVVNRSEERVAAIREELNGVEIIYKPLSEMLSCAADADVVFTSTASEAPLFLKDHVQDLPPVEAAVGGLRLFIDISVPRNVGSCVADVETARVYNVDDLKEVVAANKEDRLRKAMEAQAIISEES 627 LF+ + SV KRVRTET I LA S +L++GAG+ +LV +HL M++ NR+ ER ++ E+ G E+I P E+ + ADAD++ +STAS P+ K V+ ++ LFIDI+VPR++ V + A +Y+VDDL+ ++ N R A++A++I+ +ES Sbjct: 141 LFQKSFSVAKRVRTETEIGASAVSVAFAACSLARQIFESLSEL--HVLLVGAGETIELVARHLREHQVKHMIIANRTRERAQSLASEV-GAEVITLP--EIDARLADADIIISSTASPLPIIGKGMVERA--LKTRRNQPMLFIDIAVPRDIEPEVGKLSNAYLYSVDDLQAIIQHNMAQRQAAAVQAESIVQQES 329
BLAST of FC930965 vs. ExPASy Swiss-Prot
Match: HEM1_YERPP (Glutamyl-tRNA reductase OS=Yersinia pestis (strain Pestoides F) GN=hemA PE=3 SV=2) HSP 1 Score: 99.7525 bits (247), Expect = 1.510e-20 Identity = 67/196 (34.18%), Postives = 106/196 (54.08%), Query Frame = 1 Query: 40 LFKHAISVGKRVRTETNIXXXXXXXXXXXXELALMKLPESSHATARMLVIGAGKMGKLVIKHLVAKGCTKMVVVNRSEERVAAIREELNGVEIIYKPLSEMLSCAADADVVFTSTASEAPLFLKDHVQDLPPVEAAVGGLRLFIDISVPRNVGSCVADVETARVYNVDDLKEVVAANKEDRLRKAMEAQAIISEES 627 LF+ + SV KRVRTET I LA S +L++GAG+ +LV +HL M++ NR+ ER ++ E+ G E+I P E+ + ADAD++ +STAS P+ K V+ ++ LFIDI+VPR++ V + A +Y+VDDL+ ++ N R A++A++I+ +ES Sbjct: 141 LFQKSFSVAKRVRTETEIGASAVSVAFAACSLARQIFESLSEL--HVLLVGAGETIELVARHLREHQVKHMIIANRTRERAQSLASEV-GAEVITLP--EIDARLADADIIISSTASPLPIIGKGMVERA--LKTRRNQPMLFIDIAVPRDIEPEVGKLSNAYLYSVDDLQAIIQHNMAQRQAAAVQAESIVQQES 329
BLAST of FC930965 vs. ExPASy Swiss-Prot
Match: HEM1_YERPN (Glutamyl-tRNA reductase OS=Yersinia pestis bv. Antiqua (strain Nepal516) GN=hemA PE=3 SV=2) HSP 1 Score: 99.7525 bits (247), Expect = 1.510e-20 Identity = 67/196 (34.18%), Postives = 106/196 (54.08%), Query Frame = 1 Query: 40 LFKHAISVGKRVRTETNIXXXXXXXXXXXXELALMKLPESSHATARMLVIGAGKMGKLVIKHLVAKGCTKMVVVNRSEERVAAIREELNGVEIIYKPLSEMLSCAADADVVFTSTASEAPLFLKDHVQDLPPVEAAVGGLRLFIDISVPRNVGSCVADVETARVYNVDDLKEVVAANKEDRLRKAMEAQAIISEES 627 LF+ + SV KRVRTET I LA S +L++GAG+ +LV +HL M++ NR+ ER ++ E+ G E+I P E+ + ADAD++ +STAS P+ K V+ ++ LFIDI+VPR++ V + A +Y+VDDL+ ++ N R A++A++I+ +ES Sbjct: 141 LFQKSFSVAKRVRTETEIGASAVSVAFAACSLARQIFESLSEL--HVLLVGAGETIELVARHLREHQVKHMIIANRTRERAQSLASEV-GAEVITLP--EIDARLADADIIISSTASPLPIIGKGMVERA--LKTRRNQPMLFIDIAVPRDIEPEVGKLSNAYLYSVDDLQAIIQHNMAQRQAAAVQAESIVQQES 329
BLAST of FC930965 vs. ExPASy Swiss-Prot
Match: HEM1_YERPG (Glutamyl-tRNA reductase OS=Yersinia pestis bv. Antiqua (strain Angola) GN=hemA PE=3 SV=1) HSP 1 Score: 99.7525 bits (247), Expect = 1.510e-20 Identity = 67/196 (34.18%), Postives = 106/196 (54.08%), Query Frame = 1 Query: 40 LFKHAISVGKRVRTETNIXXXXXXXXXXXXELALMKLPESSHATARMLVIGAGKMGKLVIKHLVAKGCTKMVVVNRSEERVAAIREELNGVEIIYKPLSEMLSCAADADVVFTSTASEAPLFLKDHVQDLPPVEAAVGGLRLFIDISVPRNVGSCVADVETARVYNVDDLKEVVAANKEDRLRKAMEAQAIISEES 627 LF+ + SV KRVRTET I LA S +L++GAG+ +LV +HL M++ NR+ ER ++ E+ G E+I P E+ + ADAD++ +STAS P+ K V+ ++ LFIDI+VPR++ V + A +Y+VDDL+ ++ N R A++A++I+ +ES Sbjct: 141 LFQKSFSVAKRVRTETEIGASAVSVAFAACSLARQIFESLSEL--HVLLVGAGETIELVARHLREHQVKHMIIANRTRERAQSLASEV-GAEVITLP--EIDARLADADIIISSTASPLPIIGKGMVERA--LKTRRNQPMLFIDIAVPRDIEPEVGKLSNAYLYSVDDLQAIIQHNMAQRQAAAVQAESIVQQES 329
BLAST of FC930965 vs. ExPASy Swiss-Prot
Match: HEM1_YERPE (Glutamyl-tRNA reductase OS=Yersinia pestis GN=hemA PE=3 SV=1) HSP 1 Score: 99.7525 bits (247), Expect = 1.510e-20 Identity = 67/196 (34.18%), Postives = 106/196 (54.08%), Query Frame = 1 Query: 40 LFKHAISVGKRVRTETNIXXXXXXXXXXXXELALMKLPESSHATARMLVIGAGKMGKLVIKHLVAKGCTKMVVVNRSEERVAAIREELNGVEIIYKPLSEMLSCAADADVVFTSTASEAPLFLKDHVQDLPPVEAAVGGLRLFIDISVPRNVGSCVADVETARVYNVDDLKEVVAANKEDRLRKAMEAQAIISEES 627 LF+ + SV KRVRTET I LA S +L++GAG+ +LV +HL M++ NR+ ER ++ E+ G E+I P E+ + ADAD++ +STAS P+ K V+ ++ LFIDI+VPR++ V + A +Y+VDDL+ ++ N R A++A++I+ +ES Sbjct: 141 LFQKSFSVAKRVRTETEIGASAVSVAFAACSLARQIFESLSEL--HVLLVGAGETIELVARHLREHQVKHMIIANRTRERAQSLASEV-GAEVITLP--EIDARLADADIIISSTASPLPIIGKGMVERA--LKTRRNQPMLFIDIAVPRDIEPEVGKLSNAYLYSVDDLQAIIQHNMAQRQAAAVQAESIVQQES 329
BLAST of FC930965 vs. ExPASy Swiss-Prot
Match: HEM1_YERPA (Glutamyl-tRNA reductase OS=Yersinia pestis bv. Antiqua (strain Antiqua) GN=hemA PE=3 SV=2) HSP 1 Score: 99.7525 bits (247), Expect = 1.510e-20 Identity = 67/196 (34.18%), Postives = 106/196 (54.08%), Query Frame = 1 Query: 40 LFKHAISVGKRVRTETNIXXXXXXXXXXXXELALMKLPESSHATARMLVIGAGKMGKLVIKHLVAKGCTKMVVVNRSEERVAAIREELNGVEIIYKPLSEMLSCAADADVVFTSTASEAPLFLKDHVQDLPPVEAAVGGLRLFIDISVPRNVGSCVADVETARVYNVDDLKEVVAANKEDRLRKAMEAQAIISEES 627 LF+ + SV KRVRTET I LA S +L++GAG+ +LV +HL M++ NR+ ER ++ E+ G E+I P E+ + ADAD++ +STAS P+ K V+ ++ LFIDI+VPR++ V + A +Y+VDDL+ ++ N R A++A++I+ +ES Sbjct: 141 LFQKSFSVAKRVRTETEIGASAVSVAFAACSLARQIFESLSEL--HVLLVGAGETIELVARHLREHQVKHMIIANRTRERAQSLASEV-GAEVITLP--EIDARLADADIIISSTASPLPIIGKGMVERA--LKTRRNQPMLFIDIAVPRDIEPEVGKLSNAYLYSVDDLQAIIQHNMAQRQAAAVQAESIVQQES 329 The following BLAST results are available for this feature:
BLAST of FC930965 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 465
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Sequences
The
following sequences are available for this feature:
EST sequence >FC930965 ID=FC930965; Name=FC930965; organism=Citrus clementina; type=EST; length=694bpback to top |