FC930965
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC930965 vs. ExPASy Swiss-Prot
Match: HEM1_SYNE7 (Glutamyl-tRNA reductase OS=Synechococcus elongatus (strain PCC 7942) GN=hemA PE=3 SV=1) HSP 1 Score: 135.191 bits (339), Expect = 3.243e-31 Identity = 79/215 (36.74%), Postives = 130/215 (60.47%), Query Frame = 1 Query: 1 GQGVVGFGRNISGLFKHAISVGKRVRTETNIXXXXXXXXXXXXELALMKL------PESSHATARMLVIGAGKMGKLVIKHLVAKGCTKMVVVNRSEERVAAIREELNG-VEIIYKPLSEMLSCAADADVVFTSTASEAPLFLKDHVQDLPPVEAAVGGLRLFIDISVPRNVGSCVADVETARVYNVDDLKEVVAANKEDRLRKAMEAQAIISEE 624 GQ G GR ++ L K A++ GKRVRTET+I ELA +K+ + + A R+L++GAGKM +L+++HL+AKG + ++NR+ R + ++ G ++I LS +++ +AD+VFTST++ P+ + ++ + E + + IDI+VPRNV + V ++ + YNVDDL+EVVA N+E R + A EA+A++ EE Sbjct: 128 GQQYEGVGRILNRLLKQAVTAGKRVRTETSIGTGAVSISSAAVELAQLKVIARDDRSDGNLAGQRVLILGAGKMSRLLVQHLIAKGADTIQILNRTLGRAEELAKQYGGDLQIQVGLLSGLMNAIVEADIVFTSTSATDPILDRAKLEMVLAPEQRL----MLIDIAVPRNVAADVVELTSVESYNVDDLREVVAQNQESRRKLAEEAEALLEEE 338
BLAST of FC930965 vs. ExPASy Swiss-Prot
Match: HEM1_THEEB (Glutamyl-tRNA reductase OS=Thermosynechococcus elongatus (strain BP-1) GN=hemA PE=3 SV=1) HSP 1 Score: 131.339 bits (329), Expect = 7.798e-31 Identity = 81/209 (38.76%), Postives = 123/209 (58.85%), Query Frame = 1 Query: 1 GQGVVGFGRNISGLFKHAISVGKRVRTETNIXXXXXXXXXXXXELALMKLPESSHATARMLVIGAGKMGKLVIKHLVAKGCTKMVVVNRSEERVAAIREELNGVEIIYKPLSEMLSCAADADVVFTSTASEAPLFLKDHVQDLPPVEAAVGGLRL-FIDISVPRNVGSCVADVETARVYNVDDLKEVVAANKEDRLRKAMEAQAIISEE 624 GQ G ++ +F AI+ GKRVRTET+I ELA ++L + R+ V+GAGKM +LV++HL+A+G ++ ++NRS ER + ++ V ++++L A D+VFTSTA+ PL +D++ VG L IDISVPRNV + V ++ T +++NVDDL+ VVA N+E R + A EA+ I+ EE Sbjct: 128 GQQYKSIGPILNRVFTGAIAAGKRVRTETSIGTGAVSISSAAVELADLRLQNLQNC--RIAVVGAGKMSRLVVQHLIARGVKEIRIINRSLERAQELAQQFPEVRFELFTMTDLLPIVAAMDLVFTSTAATEPLLDRDNLG-----AVLVGDRSLAIIDISVPRNVHANVTELGTVQLFNVDDLQAVVAQNQEARRQLAQEAEGILEEE 329 HSP 2 Score: 23.8682 bits (50), Expect = 7.798e-31 Identity = 9/19 (47.37%), Postives = 14/19 (73.68%), Query Frame = 3 Query: 624 IKQFAAWRDSLETVPTIKN 680 ++ F AW +LETVP I++ Sbjct: 330 LETFLAWWHALETVPIIRS 348
BLAST of FC930965 vs. ExPASy Swiss-Prot
Match: HEM1_ANAVT (Glutamyl-tRNA reductase OS=Anabaena variabilis (strain ATCC 29413 / PCC 7937) GN=hemA PE=3 SV=1) HSP 1 Score: 133.265 bits (334), Expect = 1.233e-30 Identity = 86/220 (39.09%), Postives = 128/220 (58.18%), Query Frame = 1 Query: 1 GQGVVGFGRNISGLFKHAISVGKRVRTETNIXXXXXXXXXXXXELALMKLPESSHATARMLVIGAGKMGKLVIKHLVAKGCTKMVVVNRSEERVAAIREELNGVEIIYKPLSEMLSCAADADVVFTSTASEAPLFLKDHVQDLPPVEAAVGGLRLFIDISVPRNVGSCVADVETARVYNVDDLKEVVAANKEDRLRKAMEAQAIISEESNSLQLGGIHWR 660 GQ G ++ LFK A++ GKRVRTET+I ELA +K + A R+ ++GAGKM +L+++HLV+KG T++ +VNRS ER + ++ + I L EM++ A++ +VFTST++ P+ + L V A L LF DISVPRNV + V ++ + +NVDDLK VVA N E R + A EA+ ++ EE ++ I WR Sbjct: 128 GQQYNGIKTILNRLFKQALTAGKRVRTETSIGTGAVSISSAAVELAQIKA--ENLAACRVTILGAGKMSRLLVQHLVSKGATQISIVNRSRERAQELAKQFSEHPIRTHLLPEMMTVIAESHLVFTSTSATEPILDR---AKLEMVLAPNQPLMLF-DISVPRNVHTDVNELANVQAFNVDDLKAVVAQNYESRRKMAQEAERLLEEE---IEAFDIWWR 338
BLAST of FC930965 vs. ExPASy Swiss-Prot
Match: HEM1_ANASP (Glutamyl-tRNA reductase OS=Anabaena sp. (strain PCC 7120) GN=hemA PE=3 SV=2) HSP 1 Score: 132.88 bits (333), Expect = 1.610e-30 Identity = 86/220 (39.09%), Postives = 128/220 (58.18%), Query Frame = 1 Query: 1 GQGVVGFGRNISGLFKHAISVGKRVRTETNIXXXXXXXXXXXXELALMKLPESSHATARMLVIGAGKMGKLVIKHLVAKGCTKMVVVNRSEERVAAIREELNGVEIIYKPLSEMLSCAADADVVFTSTASEAPLFLKDHVQDLPPVEAAVGGLRLFIDISVPRNVGSCVADVETARVYNVDDLKEVVAANKEDRLRKAMEAQAIISEESNSLQLGGIHWR 660 GQ G ++ LFK A++ GKRVRTET+I ELA +K + A R+ ++GAGKM +L+++HLV+KG T++ +VNRS ER + ++ + I L EM++ A++ +VFTST++ P+ + L V A L LF DISVPRNV + V ++ + +NVDDLK VVA N E R + A EA+ ++ EE ++ I WR Sbjct: 128 GQQYNGIKTILNRLFKQALTAGKRVRTETSIGTGAVSISSAAVELAQIKA--ENLAACRVTILGAGKMSRLLVQHLVSKGATQISIVNRSRERAQELAKQFSEHPIRTHLLPEMMTVIAESHLVFTSTSATEPILDR---AKLEMVLAPNQPLMLF-DISVPRNVHTDVNELVNVQAFNVDDLKAVVAQNYESRRKMAQEAERLLEEE---IEAFDIWWR 338
BLAST of FC930965 vs. ExPASy Swiss-Prot
Match: HEM1_SYNJA (Glutamyl-tRNA reductase OS=Synechococcus sp. (strain JA-3-3Ab) GN=hemA PE=3 SV=1) HSP 1 Score: 126.716 bits (317), Expect = 2.242e-30 Identity = 75/208 (36.06%), Postives = 118/208 (56.73%), Query Frame = 1 Query: 1 GQGVVGFGRNISGLFKHAISVGKRVRTETNIXXXXXXXXXXXXELALMKLPESSHATARMLVIGAGKMGKLVIKHLVAKGCTKMVVVNRSEERVAAIREELNGVEIIYKPLSEMLSCAADADVVFTSTASEAPLFLKDHVQDLPPVEAAVGGLRLFIDISVPRNVGSCVADVETARVYNVDDLKEVVAANKEDRLRKAMEAQAIISEE 624 GQ G R ++ LFK AI+ GKR+RTET I ELAL + + S + ++ V+GAGKM +L+++HL+AKG + VVNRS ER A+ ++ I P +LS A++++VFTST + P+ + + + + + L +DISVPRN+ V + +V+NVD L +V N+ R + A+ A+A++ EE Sbjct: 128 GQACNGMDRILNRLFKAAITAGKRIRTETGIGTGAMSISSAAVELALQE--QGSLSQGKVTVVGAGKMARLLVQHLLAKGAVDITVVNRSLERAEALAKQFE-QPIQVLPWESLLSSIAESNLVFTSTGATQPILTYEQLAGVLQPDQPL----LLVDISVPRNIDPGVEKLRGVQVFNVDHLSRIVEENRAQRQKLALAAEALVEEE 328 HSP 2 Score: 26.9498 bits (58), Expect = 2.242e-30 Identity = 11/19 (57.89%), Postives = 14/19 (73.68%), Query Frame = 3 Query: 624 IKQFAAWRDSLETVPTIKN 680 ++QF W SLETVPTI + Sbjct: 329 VEQFMEWWRSLETVPTISS 347
BLAST of FC930965 vs. ExPASy Swiss-Prot
Match: HEM1_CYAPA (Glutamyl-tRNA reductase OS=Cyanophora paradoxa GN=hemA PE=3 SV=1) HSP 1 Score: 130.568 bits (327), Expect = 7.989e-30 Identity = 74/214 (34.58%), Postives = 122/214 (57.01%), Query Frame = 1 Query: 1 GQGVVGFGRNISGLFKHAISVGKRVRTETNIXXXXXXXXXXXXELALMKLPESSHATARMLVIGAGKMGKLVIKHLVAKGCTKMVVVNRSEERVAAIREELNGVEIIYKPLSEMLSCAADADVVFTSTASEAPLFLKDHVQDLPPVEAAVGGLRLFIDISVPRNVGSCVADVETARVYNVDDLKEVVAANKEDRLRKAMEAQAIISEESNSLQL 642 GQ G G ++ +FK AIS GKRVRTET I ELA +K + TA + ++GAGKM +L+++HL++K + +VNRS ER + ++ I LSE+ + ++D+VFT T+S+ P+ + + D + + + + DI+VPRNV V+ + +V+NVDDLK VV+ N++ R + A A+ ++ EE ++ + Sbjct: 128 GQQYQGIGPVLNNIFKQAISAGKRVRTETQISTGAVSISSAAVELAQIK--KQDLRTANITILGAGKMSRLLVQHLLSKRVKDINIVNRSVERAKLLVDQFKEANINIYNLSELKTILQNSDIVFTGTSSQEPIITPELINDCDNLPSEL----MLFDIAVPRNVDPNVSQFDNIKVFNVDDLKVVVSQNQQTRRKMAKAAEILLEEELSAFNI 335
BLAST of FC930965 vs. ExPASy Swiss-Prot
Match: HEM1_SYNJB (Glutamyl-tRNA reductase OS=Synechococcus sp. GN=hemA PE=3 SV=1) HSP 1 Score: 124.405 bits (311), Expect = 1.852e-29 Identity = 78/208 (37.50%), Postives = 119/208 (57.21%), Query Frame = 1 Query: 1 GQGVVGFGRNISGLFKHAISVGKRVRTETNIXXXXXXXXXXXXELALMKLPESSHATARMLVIGAGKMGKLVIKHLVAKGCTKMVVVNRSEERVAAIREELNGVEIIYKPLSEMLSCAADADVVFTSTASEAPLFLKDHVQDLPPVEAAVGGLRLFIDISVPRNVGSCVADVETARVYNVDDLKEVVAANKEDRLRKAMEAQAIISEE 624 GQ G R ++ LFK AI+ GKRVRTET I ELAL + + S + ++ V+GAG+M +L+++HL+AKG + VVNRS ER A+ ++ I P +L+ A++++VFTST + P+ + Q L V L L +DISVPRN+ V ++ +V+NVD L +V N+ R + A+ A+A++ EE Sbjct: 128 GQACNGMDRILNRLFKAAITAGKRVRTETEIGTGAMSISSAAVELALQE--QGSLSQGKVTVVGAGRMARLLVQHLLAKGAVDITVVNRSLERAEALAKQFEQ-PIQVLPWESLLNSVAESNLVFTSTGATQPIL---NYQQLAGVLQPDQPL-LLVDISVPRNIDPDVEKLKGVQVFNVDHLSRIVEENRAQRQKLALAAEALVEEE 328 HSP 2 Score: 26.1794 bits (56), Expect = 1.852e-29 Identity = 11/19 (57.89%), Postives = 13/19 (68.42%), Query Frame = 3 Query: 624 IKQFAAWRDSLETVPTIKN 680 + QF W SLETVPTI + Sbjct: 329 VDQFMEWWRSLETVPTISS 347
BLAST of FC930965 vs. ExPASy Swiss-Prot
Match: HEM1_PROM9 (Glutamyl-tRNA reductase OS=Prochlorococcus marinus (strain MIT 9312) GN=hemA PE=3 SV=1) HSP 1 Score: 127.487 bits (319), Expect = 6.763e-29 Identity = 78/216 (36.11%), Postives = 127/216 (58.80%), Query Frame = 1 Query: 1 GQGVVGFGRNISGLFKHAISVGKRVRTETNIXXXXXXXXXXXXELALMKLPES-------SHATARMLVIGAGKMGKLVIKHLVAKGCTKMVVVNRSEERVAAIREELNGVEIIYKPLSEMLSCAADADVVFTSTASEAPLFLKDHVQDLPPVEAAVGGLRL-FIDISVPRNVGSCVADVETARVYNVDDLKEVVAANKEDRLRKAMEAQAIISEE 624 GQ G ++ L ++S GK+VR+ETN+ ELA +K+ + S + ++LV+GAG+M +L+I HL AKGC K+++VNR+ +R + + +EI+ K L+E+ + + +VFTSTASE P+ DL +E +L FIDI VPRN+ + V + + + ++VDDL+EVV+ N+E R + A EA++++ EE Sbjct: 128 GQENQSTGPILNRLLTQSVSTGKKVRSETNLGTGAVSISSAAVELAQLKIGQEKGFDTLVSLESEKVLVVGAGRMSRLLITHLKAKGCHKLILVNRNIDRALNLAIDFPDIEIVCKGLNELDENISISSLVFTSTASEEPII------DLAKIEKLNLNNKLKFIDIGVPRNISNDVKNHQFVKSFDVDDLQEVVSRNQEFRQKIAKEAESLVEEE 337
BLAST of FC930965 vs. ExPASy Swiss-Prot
Match: HEM1_PROM0 (Glutamyl-tRNA reductase OS=Prochlorococcus marinus (strain MIT 9301) GN=hemA PE=3 SV=1) HSP 1 Score: 127.487 bits (319), Expect = 6.763e-29 Identity = 78/216 (36.11%), Postives = 126/216 (58.33%), Query Frame = 1 Query: 1 GQGVVGFGRNISGLFKHAISVGKRVRTETNIXXXXXXXXXXXXELALMKLPES-------SHATARMLVIGAGKMGKLVIKHLVAKGCTKMVVVNRSEERVAAIREELNGVEIIYKPLSEMLSCAADADVVFTSTASEAPLFLKDHVQDLPPVEAAVGGLRL-FIDISVPRNVGSCVADVETARVYNVDDLKEVVAANKEDRLRKAMEAQAIISEE 624 GQ G ++ L ++S GK+VR+ETN+ ELA +K+ + S + +LV+GAG+M +L+I HL +KGC K++++NR+ +R + ++ +EI+ K L+E+ + + +VFTSTASE P+ DL +E RL FIDI VPRN+ + V E + ++VDDL+EVV+ N+E R + A EA++++ EE Sbjct: 128 GQENQSTGPILNRLLTQSVSTGKKVRSETNLGTGAVSISSAAVELAQLKIGQEKGFDNLVSLESENVLVVGAGRMSRLLITHLKSKGCHKLILLNRNIDRALNLAQDFPDLEIVCKGLNELEENISLSSLVFTSTASEEPII------DLTKIEKINLSNRLKFIDIGVPRNISNDVKQHEFVKSFDVDDLQEVVSRNQEFRQKIAKEAESLVEEE 337
BLAST of FC930965 vs. ExPASy Swiss-Prot
Match: HEM1_PROMS (Glutamyl-tRNA reductase OS=Prochlorococcus marinus (strain AS9601) GN=hemA PE=3 SV=1) HSP 1 Score: 125.946 bits (315), Expect = 1.968e-28 Identity = 76/216 (35.19%), Postives = 126/216 (58.33%), Query Frame = 1 Query: 1 GQGVVGFGRNISGLFKHAISVGKRVRTETNIXXXXXXXXXXXXELALMKLPES-------SHATARMLVIGAGKMGKLVIKHLVAKGCTKMVVVNRSEERVAAIREELNGVEIIYKPLSEMLSCAADADVVFTSTASEAPLFLKDHVQDLPPVEAAVGGLRL-FIDISVPRNVGSCVADVETARVYNVDDLKEVVAANKEDRLRKAMEAQAIISEE 624 GQ G ++ L ++S GK+VR+ETN+ ELA +K+ + S + +LV+GAG+M +L+I HL +KGC K++++NR+ +R + ++ +EI+ + L+E+ + + +VFTSTASE P+ DL +E RL FIDI VPRN+ + V + + ++VDDL+EVV+ N+E R + A EA++++ EE Sbjct: 128 GQENQSTGPILNRLLTQSVSTGKKVRSETNLGTGAVSISSAAVELAQLKIGQEKGFDTLVSLESENVLVVGAGRMSRLLITHLKSKGCHKLILLNRNIDRALNLAQDFPDLEIVCRGLNELEENISLSSIVFTSTASEEPII------DLAKIEKLNLSNRLKFIDIGVPRNISNDVKQHQFVKSFDVDDLQEVVSRNQEFRQKIAKEAESLVEEE 337 The following BLAST results are available for this feature:
BLAST of FC930965 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 465
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >FC930965 ID=FC930965; Name=FC930965; organism=Citrus clementina; type=EST; length=694bpback to top |