FC930965
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC930965 vs. ExPASy Swiss-Prot
Match: HEM1_PROM2 (Glutamyl-tRNA reductase OS=Prochlorococcus marinus (strain MIT 9215) GN=hemA PE=3 SV=1) HSP 1 Score: 125.176 bits (313), Expect = 3.356e-28 Identity = 76/216 (35.19%), Postives = 126/216 (58.33%), Query Frame = 1 Query: 1 GQGVVGFGRNISGLFKHAISVGKRVRTETNIXXXXXXXXXXXXELALMKLPES-------SHATARMLVIGAGKMGKLVIKHLVAKGCTKMVVVNRSEERVAAIREELNGVEIIYKPLSEMLSCAADADVVFTSTASEAPLFLKDHVQDLPPVEAAVGGLRL-FIDISVPRNVGSCVADVETARVYNVDDLKEVVAANKEDRLRKAMEAQAIISEE 624 GQ G ++ L ++S GK+VR+ETN+ ELA +K+ + S + +LV+GAG+M +L+I HL +KGC K+++VNR+ +R + ++ ++I+ + L+E+ + + +VFTSTASE P+ DL +E +L FIDI VPRN+ + V E + ++VDDL+EVV+ N+E R + A EA++++ EE Sbjct: 128 GQENQSTGPILNRLLTQSVSTGKKVRSETNLGTGAVSISSAAVELAQLKIGQEKGFDTLVSLESENVLVVGAGRMSRLLITHLKSKGCHKLILVNRNIDRALNLAQDFPDLKIVCRGLNELDENISISSLVFTSTASEVPII------DLAKIEKLNLNNKLKFIDIGVPRNISNDVKQHEFVKSFDVDDLQEVVSRNQEFRQKIAKEAESLVEEE 337
BLAST of FC930965 vs. ExPASy Swiss-Prot
Match: HEM1_PROMM (Glutamyl-tRNA reductase OS=Prochlorococcus marinus (strain MIT 9313) GN=hemA PE=3 SV=1) HSP 1 Score: 122.094 bits (305), Expect = 3.373e-28 Identity = 75/216 (34.72%), Postives = 120/216 (55.56%), Query Frame = 1 Query: 1 GQGVVGFGRNISGLFKHAISVGKRVRTETNIXXXXXXXXXXXXELALMKLPESSHATARML-------VIGAGKMGKLVIKHLVAKGCTKMVVVNRSEERVAAIREELNGVEIIYKPLSEMLSCAADADVVFTSTASEAPLFLKDHVQDLPPVEAAVGGLRLFIDISVPRNVGSCVADVETARVYNVDDLKEVVAANKEDRLRKAMEAQAIISEES 627 GQ G ++ L A+S GKRVR+ETN+ ELA +KL ++ M V+GAG+M +L+++HL AKGC+ ++++NR+ +R + + + + +PL ++ C + +VFTSTA++ P+ ++ L LRL IDI VPRN+ S V DV ++VDDL EVV+ N+E R + A EA+ ++ EE+ Sbjct: 128 GQEHKSMGPILNRLLTQAVSTGKRVRSETNLGTGAVSISSAAVELAQLKLGQAQGEDQLMTLESELVAVVGAGRMSRLLLQHLQAKGCSGVMLLNRTRQRAEDLSADFPELPVECRPLDDLNHCLSTCSLVFTSTAADDPIVDASLLKQL----KRRSFLRL-IDIGVPRNIASDVVDVPGVESHDVDDLHEVVSRNQEARQQMAKEAEVVLQEET 338 HSP 2 Score: 24.2534 bits (51), Expect = 3.373e-28 Identity = 10/14 (71.43%), Postives = 10/14 (71.43%), Query Frame = 3 Query: 633 FAAWRDSLETVPTI 674 F W DSLE VPTI Sbjct: 341 FLEWWDSLEAVPTI 354
BLAST of FC930965 vs. ExPASy Swiss-Prot
Match: HEM1_SYNPX (Glutamyl-tRNA reductase OS=Synechococcus sp. (strain WH8102) GN=hemA PE=3 SV=1) HSP 1 Score: 119.013 bits (297), Expect = 5.717e-28 Identity = 74/216 (34.26%), Postives = 123/216 (56.94%), Query Frame = 1 Query: 1 GQGVVGFGRNISGLFKHAISVGKRVRTETNIXXXXXXXXXXXXELALMKLPES-------SHATARMLVIGAGKMGKLVIKHLVAKGCTKMVVVNRSEERVAAIREELNGVEIIYKPLSEMLSCAADADVVFTSTASEAPLFLKDHVQDLPPVEAAVGGLRLFIDISVPRNVGSCVADVETARVYNVDDLKEVVAANKEDRLRKAMEAQAIISEES 627 GQ G ++ L A+S GKRVR+ETN+ ELA +KL +S + + ++ V+GAG+M +L+++HL AKG + +V++NR+ +R + + + + +PL+++ C + +VFTSTA++ P+ L P+ LRL IDI VPRN+ + A V+ ++VDDL+EVVA N+E R A EA+ ++ +E+ Sbjct: 128 GQEHKSLGPILNRLLTQAVSTGKRVRSETNLGTGAVSISSAAVELAQLKLGQSRGLDQLVTLESEQIAVVGAGRMSRLLLQHLQAKGASGVVLLNRTVQRAELLAADFPDLPVQCRPLTDLDQCLSTCSLVFTSTAADDPII---DAARLEPLNRR-SKLRL-IDIGVPRNIAADAAAVDGVESHDVDDLQEVVARNQEARQAMAREAEQLLQQEA 338 HSP 2 Score: 26.5646 bits (57), Expect = 5.717e-28 Identity = 11/16 (68.75%), Postives = 12/16 (75.00%), Query Frame = 3 Query: 627 KQFAAWRDSLETVPTI 674 +QF W DSLE VPTI Sbjct: 339 QQFLEWWDSLEAVPTI 354
BLAST of FC930965 vs. ExPASy Swiss-Prot
Match: HEM1_PROM3 (Glutamyl-tRNA reductase OS=Prochlorococcus marinus (strain MIT 9303) GN=hemA PE=3 SV=1) HSP 1 Score: 120.939 bits (302), Expect = 7.441e-28 Identity = 74/216 (34.26%), Postives = 120/216 (55.56%), Query Frame = 1 Query: 1 GQGVVGFGRNISGLFKHAISVGKRVRTETNIXXXXXXXXXXXXELALMKLPESSHATARML-------VIGAGKMGKLVIKHLVAKGCTKMVVVNRSEERVAAIREELNGVEIIYKPLSEMLSCAADADVVFTSTASEAPLFLKDHVQDLPPVEAAVGGLRLFIDISVPRNVGSCVADVETARVYNVDDLKEVVAANKEDRLRKAMEAQAIISEES 627 GQ G ++ L A+S GKRVR+ETN+ ELA +KL ++ M V+GAG+M +L+++HL AKGC+ ++++NR+ +R + + + + +PL ++ C + +VFTSTA++ P+ ++ L LRL IDI VPRN+ S V D+ ++VDDL EVV+ N+E R + A EA+ ++ EE+ Sbjct: 128 GQEHKSMGPILNRLLTQAVSTGKRVRSETNLGTGAVSISSAAVELAQLKLGQAQGEDQLMTLESELVAVVGAGRMSRLLLQHLQAKGCSGVMLLNRTRQRAEDLSADFPELPVECRPLDDLNHCLSTCSLVFTSTAADDPIVDASLLKQL----KRRSFLRL-IDIGVPRNIASDVVDLPGVESHDVDDLHEVVSRNQEARQQMAKEAEVVLQEET 338 HSP 2 Score: 24.2534 bits (51), Expect = 7.441e-28 Identity = 10/14 (71.43%), Postives = 10/14 (71.43%), Query Frame = 3 Query: 633 FAAWRDSLETVPTI 674 F W DSLE VPTI Sbjct: 341 FLEWWDSLEAVPTI 354
BLAST of FC930965 vs. ExPASy Swiss-Prot
Match: HEM1_SYNPW (Glutamyl-tRNA reductase OS=Synechococcus sp. (strain WH7803) GN=hemA PE=3 SV=1) HSP 1 Score: 117.857 bits (294), Expect = 9.686e-28 Identity = 74/216 (34.26%), Postives = 119/216 (55.09%), Query Frame = 1 Query: 1 GQGVVGFGRNISGLFKHAISVGKRVRTETNIXXXXXXXXXXXXELALMKLPES-------SHATARMLVIGAGKMGKLVIKHLVAKGCTKMVVVNRSEERVAAIREELNGVEIIYKPLSEMLSCAADADVVFTSTASEAPLFLKDHVQDLPPVEAAVGGLRLFIDISVPRNVGSCVADVETARVYNVDDLKEVVAANKEDRLRKAMEAQAIISEES 627 GQ G ++ L A+S GKRVR+ETN+ ELA +KL +S + ++ V+GAG+M +L+++HL AKG + +VV+NR+ R A+ + + + +PL ++ C + ++FTSTA++ P+ + + L LRL IDI VPRN+ + V + ++VDDLKEVV N+E R + A EAQ ++ E+ Sbjct: 128 GQEHKSLGPILNRLLTQAVSTGKRVRSETNLGTGAVSISSAAVELAQLKLGQSRGLDELVTLEDEQVAVVGAGRMSRLLLQHLQAKGASGVVVLNRTVARAEALAADFPTLPVQCRPLKDLDHCLSTCSLIFTSTAADDPIIDAERLSKL----NRRSSLRL-IDIGVPRNIAADVEGIGGVDAHDVDDLKEVVERNQEARQQVAREAQGLLDGEA 338 HSP 2 Score: 26.9498 bits (58), Expect = 9.686e-28 Identity = 11/16 (68.75%), Postives = 12/16 (75.00%), Query Frame = 3 Query: 627 KQFAAWRDSLETVPTI 674 +QF W DSLE VPTI Sbjct: 339 RQFLEWWDSLEAVPTI 354
BLAST of FC930965 vs. ExPASy Swiss-Prot
Match: HEM1_PROM5 (Glutamyl-tRNA reductase OS=Prochlorococcus marinus (strain MIT 9515) GN=hemA PE=3 SV=1) HSP 1 Score: 123.635 bits (309), Expect = 9.766e-28 Identity = 72/215 (33.49%), Postives = 120/215 (55.81%), Query Frame = 1 Query: 1 GQGVVGFGRNISGLFKHAISVGKRVRTETNIXXXXXXXXXXXXELALMKLPESSHATA-------RMLVIGAGKMGKLVIKHLVAKGCTKMVVVNRSEERVAAIREELNGVEIIYKPLSEMLSCAADADVVFTSTASEAPLFLKDHVQDLPPVEAAVGGLRLFIDISVPRNVGSCVADVETARVYNVDDLKEVVAANKEDRLRKAMEAQAIISEE 624 GQ G ++ L ++S GK+VR ETN+ ELA +K+ + + ++LV+GAG+M +L+I HL +KGC K+ ++NR+ +R + + +EII K L E+ + +VFTSTASE P + ++++ ++ FIDI VPRN+ + V + ++VDDL+EVV+ N+E R + A EA++++ EE Sbjct: 128 GQENQSTGPILNRLLSQSVSAGKKVRAETNLGTGAVSISSAAVELAQLKIGQDNGIDGLVSLKGEKVLVVGAGRMSRLLITHLKSKGCNKLTLLNRNIDRAINLSGDFPDIEIICKGLDELDKSITLSSLVFTSTASEKPFIDLERIKNI-----SLNNKLKFIDIGVPRNISNDVKQHDLIEAFDVDDLEEVVSRNQEFRQKIAKEAESLVKEE 337
BLAST of FC930965 vs. ExPASy Swiss-Prot
Match: HEM1_SYNS3 (Glutamyl-tRNA reductase OS=Synechococcus sp. (strain CC9311) GN=hemA PE=3 SV=1) HSP 1 Score: 120.168 bits (300), Expect = 1.261e-27 Identity = 77/215 (35.81%), Postives = 121/215 (56.28%), Query Frame = 1 Query: 1 GQGVVGFGRNISGLFKHAISVGKRVRTETNIXXXXXXXXXXXXELALMKLPES-------SHATARMLVIGAGKMGKLVIKHLVAKGCTKMVVVNRSEERVAAIREELNGVEIIYKPLSEMLSCAADADVVFTSTASEAPLFLKDHVQDLPPVEAAVGGLRLFIDISVPRNVGSCVADVETARVYNVDDLKEVVAANKEDRLRKAMEAQAIISEE 624 GQ G ++ L A+S GKRVR+ETN+ ELA +KL +S + T ++ V+GAG+M +L+++HL AKG + +V++NR+ ER +A+ + + I + L ++ C + +VFTSTA + P+ + + L LRL IDI VPRN+ S V +V ++VDDL+EVV N+E R + A EA+ ++ EE Sbjct: 128 GQEHKSIGPILNRLLTQAVSTGKRVRSETNLSTGAVSVSSAAVELAQLKLGQSRGQDALVTLETEQIAVVGAGRMSRLLLQHLQAKGASGVVLLNRTIERASALATDFPNLPIQCRGLDDLDQCLSTCSLVFTSTAVDDPIIDANRLNAL----NRRSSLRL-IDIGVPRNIASDVHEVSGVESHDVDDLQEVVERNQEARQQVAREAEGLLLEE 337 HSP 2 Score: 24.2534 bits (51), Expect = 1.261e-27 Identity = 10/14 (71.43%), Postives = 10/14 (71.43%), Query Frame = 3 Query: 633 FAAWRDSLETVPTI 674 F W DSLE VPTI Sbjct: 341 FLEWWDSLEAVPTI 354
BLAST of FC930965 vs. ExPASy Swiss-Prot
Match: HEM1_PROM4 (Glutamyl-tRNA reductase OS=Prochlorococcus marinus (strain MIT 9211) GN=hemA PE=3 SV=1) HSP 1 Score: 122.479 bits (306), Expect = 2.137e-27 Identity = 79/219 (36.07%), Postives = 127/219 (57.99%), Query Frame = 1 Query: 1 GQGVVGFGRNISGLFKHAISVGKRVRTETNIXXXXXXXXXXXXELALMKLPES-------SHATARMLVIGAGKMGKLVIKHLVAKGCTKMVVVNRSEERVAAIREELNGVEIIYKPLSEMLSCAADADVVFTSTASEAPLF----LKDHVQDLPPVEAAVGGLRLFIDISVPRNVGSCVADVETARVYNVDDLKEVVAANKEDRLRKAMEAQAIISEE 624 GQ G ++ L A+S GKRVR+ETN+ ELA +KL +S S ++ ++GAG+M +L+I+HL +KGC+K+ ++NR+ +R A+ + V+I + L ++ ++ ++FTSTA+E P+ LK+ V+D LRL IDI VPRN+ S V + ++VDDL+EVV+ N+E R + A+EA+A++ EE Sbjct: 128 GQENHSMGPILNRLLTQAVSTGKRVRSETNLGTGAVSISSAAVELAQLKLGQSEGKDELMSLEREKVSIVGAGRMSRLLIQHLQSKGCSKLKLINRTFQRAEALALDFPDVDIHCQLLDDLDESLRNSTLIFTSTAAENPIIDAARLKEVVRD--------ETLRL-IDIGVPRNISSDVKGLTGFEAHDVDDLQEVVSRNQEARQQIALEAEALVDEE 337 HSP 2 Score: 21.1718 bits (43), Expect = 2.137e-27 Identity = 9/14 (64.29%), Postives = 9/14 (64.29%), Query Frame = 3 Query: 633 FAAWRDSLETVPTI 674 F W SLE VPTI Sbjct: 341 FLEWWASLEAVPTI 354
BLAST of FC930965 vs. ExPASy Swiss-Prot
Match: HEM1_VIBSL (Glutamyl-tRNA reductase OS=Vibrio splendidus (strain LGP32) GN=hemA PE=3 SV=1) HSP 1 Score: 122.479 bits (306), Expect = 2.176e-27 Identity = 82/196 (41.84%), Postives = 115/196 (58.67%), Query Frame = 1 Query: 40 LFKHAISVGKRVRTETNIXXXXXXXXXXXXELALMKLPESSHATARMLVIGAGKMGKLVIKHLVAKGCTKMVVVNRSEERVAAIREELNGVEIIYKPLSEMLSCAADADVVFTSTASEAPLFLKDHVQDLPPVEAAVGGLRLFIDISVPRNVGSCVADVETARVYNVDDLKEVVAANKEDRLRKAMEAQAIISEES 627 LF+ + SV KRVRTET I LA K S A + +L++GAG+ +LV KHL A GCTKM+V NR+ ER + EE G E+I L+E+ AD+V +STAS P+ K V+ ++ L +DI+VPR+V S V D+ A +Y+VDDL+ +V N E R +A++A+AI+SEES Sbjct: 139 LFQKSFSVAKRVRTETEIGGSAVSVAYAACTLA--KHIFESIAESTVLLVGAGETIELVAKHLSANGCTKMIVANRTRERALGLAEEF-GAEVI--SLNEIPDHLHRADIVISSTASPLPIIGKGMVETA--LKTRKHQPMLLVDIAVPRDVESQVGDLNDAYLYSVDDLQSIVDGNIEQRKVEAIQAEAIVSEES 327
BLAST of FC930965 vs. ExPASy Swiss-Prot
Match: HEM1_VIBPA (Glutamyl-tRNA reductase OS=Vibrio parahaemolyticus GN=hemA PE=3 SV=1) HSP 1 Score: 122.479 bits (306), Expect = 2.176e-27 Identity = 82/206 (39.81%), Postives = 121/206 (58.74%), Query Frame = 1 Query: 28 NISGLFKHAISVGKRVRTETNIXXXXXXXXXXXXELALMKLPESSHATARMLVIGAGKMGKLVIKHLVAKGCTKMVVVNRSEERVAAIREELNGVEIIYKPLSEMLSCAADADVVFTSTASEAPLFLKDHVQDLPPVEAAVGGLR----LFIDISVPRNVGSCVADVETARVYNVDDLKEVVAANKEDRLRKAMEAQAIISEESNS 633 +I LF+ SV KRVRTET+I LA S +T +L++GAG+ +LV KHL + GCTKM+V NR++ER + E+ G E+I L+E+ A AD+V +STAS P+ K V E A+ R L +DI+VPR+V + V ++ A +Y+VDDL+ ++ +N E R +A++A+AI+SEES S Sbjct: 135 SIDKLFQKTFSVAKRVRTETDIGGNAVSVAYAACTLAKHIFESLSDST--VLLVGAGETIELVAKHLASNGCTKMIVANRTKERAQGLAEQF-GAEVI--SLNEIPDYLARADIVISSTASPLPIIGKGMV------ETALKQRRHQPILLVDIAVPRDVEAQVGELNDAYLYSVDDLQSIIDSNIEQRKVEAIQAEAIVSEESAS 329 The following BLAST results are available for this feature:
BLAST of FC930965 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 465
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Sequences
The
following sequences are available for this feature:
EST sequence >FC930965 ID=FC930965; Name=FC930965; organism=Citrus clementina; type=EST; length=694bpback to top |