FC930965
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC930965 vs. ExPASy Swiss-Prot
Match: HEM1_CHLP8 (Glutamyl-tRNA reductase OS=Chlorobaculum parvum (strain NCIB 8327) GN=hemA PE=1 SV=3) HSP 1 Score: 77.0258 bits (188), Expect = 1.048e-13 Identity = 53/196 (27.04%), Postives = 101/196 (51.53%), Query Frame = 1 Query: 52 AISVGKRVRTETNIXXXXXXXXXXXXELALMKLPESSHATARMLVIGAGKMGKLVIKHLVAKGCTKMVVVNRSEERVAAIREELNGVEII-YKPLSEMLSCAADADVVFTSTASEAPLFLKDHVQDLPPVEAAVGGLRL----FIDISVPRNVGSCVADVETARVYNVDDLKEVVAANKEDRLRKAMEAQAIISEE 624 A SV K+V+T T + ELA S+ + ++L+IGAG+ G+L KH+ AK +V+ NR++ + A+ EEL ++ Y+ E L + D++ T+ ++ K+++ + ++ ++ RL +D+ +PRNV V ++ + ++D LK ++ N E R + + ++II EE Sbjct: 145 AFSVAKKVKTRTKLMEGAVSVSYAAVELAQKIF--SNLSMKKVLLIGAGETGELAAKHMYAKNARNIVITNRTQSKAEALAEELGTNRVLPYESYKEHLH---EFDIIITAVST------KEYILNAAEMQQSMAKRRLKPVIILDLGLPRNVDPEVGALQNMFLKDIDALKHIIDKNLERRRAELPKVKSIIDEE 329
BLAST of FC930965 vs. ExPASy Swiss-Prot
Match: HEM1_CHLL2 (Glutamyl-tRNA reductase OS=Chlorobium limicola (strain DSM 245 / NBRC 103803) GN=hemA PE=3 SV=1) HSP 1 Score: 77.0258 bits (188), Expect = 1.048e-13 Identity = 56/204 (27.45%), Postives = 99/204 (48.53%), Query Frame = 1 Query: 31 ISGLFKHAISVGKRVRTETNIXXXXXXXXXXXXELALMKLPESSHATARMLVIGAGKMGKLVIKHLVAKGCTKMVVVNRSEERVAAIREELNGVEIIYKPLSEMLSCAADADVVFTSTAS------EAPLFLKDHVQDLPPVEAAVGGLRLFIDISVPRNVGSCVADVETARVYNVDDLKEVVAANKEDRLRKAMEAQAIISEE 624 I+ L A SV K+V+T+T I ELA S+ + ++L+IGAG+ G+L KH+ K +V+ NR+ + A+ EEL +++ P + D++ T+ ++ EA + + L PV + +D+ +PRNV ++ ++ + ++D LK ++ N E R + + QAII EE Sbjct: 138 ITRLCHTAFSVAKKVKTKTKIMEGAVSVSYAAVELAQKIF--SNLSMKKILLIGAGETGELAAKHMCQKNARNIVITNRTLSKAEALAEELGTGKVL--PFESYKEYLHEFDIIITAVSTKEYVLREAEMHQSMQKRRLKPV--------IILDLGLPRNVDPDISRLQNMFLKDIDALKHIIDKNLEKRRGELPKVQAIIEEE 329
BLAST of FC930965 vs. ExPASy Swiss-Prot
Match: HEM1_STAS1 (Glutamyl-tRNA reductase OS=Staphylococcus saprophyticus subsp. saprophyticus (strain ATCC 15305 / DSM 20229) GN=hemA PE=3 SV=1) HSP 1 Score: 76.6406 bits (187), Expect = 1.369e-13 Identity = 57/206 (27.67%), Postives = 102/206 (49.51%), Query Frame = 1 Query: 22 GRNISGLFKHAISVGKRVRTETNIXXXXXXXXXXXXELALMKLPESSHATARMLVIGAGKMGKLVIKHLVAKGCTKMVVVNRSEERVAAIREELNGVEIIYKPLSEMLSCAADADVVFTSTASEAPLFLKDHVQDLPPVEAAVGGLRLFIDISVPRNVGSCVADVETARVYNVDDLKEVVAANKEDRLRKAMEAQAIISEESNSLQ 639 G + LFK AI+ K+ ET+I EL+ + ++ A L+IGAG M +L + +L+ G T + +VNR+ + + + + + ++P+ + D D+V +ST+SE + + +Q + E L + IDI+VPR++ + + Y+VDDLK +V AN +R + A+ II N ++ Sbjct: 135 GTIFNHLFKQAITFAKKAHNETDIADNAVSVSYAAVELSKKVFGKVNNKQA--LIIGAGDMSELSLLNLIGSGVTDITIVNRTLSKAQDLAMKHH---VKFEPMESLPRLLVDVDIVISSTSSENYIVTNEMLQSIS-TERKHDSL-VMIDIAVPRDIEPNIDTIHDMFSYDVDDLKGLVDANLRER---QLAAEQIIQNIPNEIE 330
BLAST of FC930965 vs. ExPASy Swiss-Prot
Match: HEM1_RUTMC (Glutamyl-tRNA reductase OS=Ruthia magnifica subsp. Calyptogena magnifica GN=hemA PE=3 SV=1) HSP 1 Score: 76.6406 bits (187), Expect = 1.369e-13 Identity = 58/196 (29.59%), Postives = 95/196 (48.47%), Query Frame = 1 Query: 40 LFKHAISVGKRVRTETNIXXXXXXXXXXXXELALMKLPESSHATARMLVIGAGKMGKLVIKHLVAKGCTKMVVVNRSEERVAAIREELNGVEIIYKPLSEMLSCAADADVVFTSTASEAPLFLKDHVQDLPPVEAAVGGLRLFIDISVPRNVGSCVADVETARVYNVDDLKEVVAANKEDRLRKAMEAQAIISEES 627 LF+H S K+VRT T I +L+ + S T +L+IGAG+M +L +L KG KM+V NR+ E I I K S S AD++ +STA+ P+ K ++ ++ +DI++PR++ V ++ +Y +DDL +VV N +R ++ AQ II +++ Sbjct: 141 LFQHTFSTAKKVRTNTQIGASPVSIAYCAVKLSEKIFEQLSEQT--VLLIGAGEMIELCAHYLNQKGVNKMIVANRTIENAKKIAHLYQAQSIGLKQFS---SFVYKADIIISSTAASMPIIGKGLIESA--LKKRKHKPIFMLDIAIPRDIEPEVGQLDDVYLYTIDDLGQVVNDNIGNREKEKGLAQEIIVKQN 329
BLAST of FC930965 vs. ExPASy Swiss-Prot
Match: HEM1_RALEH (Glutamyl-tRNA reductase OS=Ralstonia eutropha (strain ATCC 17699 / H16 / DSM 428 / Stanier 337) GN=hemA PE=3 SV=1) HSP 1 Score: 76.6406 bits (187), Expect = 1.369e-13 Identity = 65/218 (29.82%), Postives = 105/218 (48.17%), Query Frame = 1 Query: 22 GRNISGLFKHAISVGKRVRTETNIXXXXXXXXXXXXELALMKLPESSHATARMLVIGAGKMGKLVIKHLVAKGCTKMVVVNRSEERVAAIREELNGVEIIYKP--LSEMLSCAADADVVFTSTASEAPLFLKDHVQDLPPVEAAVGGLR----LFIDISVPRNVGSCVADVETARVYNVDDLKEVVAANKEDRLRKAMEAQAIISEESNSLQLGGIHW 657 G ++ LF+ +V K VR +T I LA ++ ES +T R+L IGAG+M +L H A+ ++VV NR+ ER + E+L+G + L+++ + D+V + TAS P+ L VE AV + + +D++VPR+V VA ++ +Y VDDL +V R +A+AII + +HW Sbjct: 141 GTYLNQLFQRTFAVAKEVRGQTEIGAHSVSMAAAAVRLA-QRIFESV-STQRVLFIGAGEMIELCATHFAAQQPRQIVVANRTVERGEKLAEQLSGQGLTANAIRLTDLGERLHEFDIVVSCTASSLPII------GLGAVERAVKRRKHRPIMMVDLAVPRDVEPEVARLDDVFLYTVDDLGAIVREGNAMRQAAVAQAEAIIESRVQNF----MHW 346
BLAST of FC930965 vs. ExPASy Swiss-Prot
Match: HEM1_NITEU (Glutamyl-tRNA reductase OS=Nitrosomonas europaea GN=hemA PE=3 SV=1) HSP 1 Score: 76.6406 bits (187), Expect = 1.369e-13 Identity = 62/206 (30.10%), Postives = 97/206 (47.09%), Query Frame = 1 Query: 40 LFKHAISVGKRVRTETNIXXXXXXXXXXXXELALMKLPESSHATARMLVIGAGKMGKLVIKHLVAKGCTKMVVVNRSEERVAAIREELNGVEIIYKPLSEMLSCAADADVVFTSTASEAPLFLKDHVQDLPPVEAAVGGLRLFIDISVPRNVGSCVADVETARVYNVDDLKEVVAANKEDRLRKAMEAQAIISEESNSLQLGGIHW 657 +F+ V K VRT T I LA S ++L IGAG+M +L H VA+ + V NR+ ER A+ N I L + L+ D+V TSTAS P+ K ++ ++ +D++VPR+V + VA+++ +Y VDDL ++V ++R +A+ II ESN + +HW Sbjct: 137 MFQRTFFVAKEVRTSTEIGACSVSMAAASARLAERIFGNISEQ--KVLFIGAGEMIELCAAHFVARHPVHVTVANRTVERAEALARRFNAHPISLGELPDQLALH---DIVVTSTASPLPILGKGMLERA--IKQRKHRPVFIVDLAVPRDVEAEVAELDDVFLYYVDDLADIVKEGLDNRQGAVTQAETII--ESNVVDF--MHW 331
BLAST of FC930965 vs. ExPASy Swiss-Prot
Match: HEM1_LISW6 (Glutamyl-tRNA reductase OS=Listeria welshimeri serovar 6b (strain ATCC 35897 / DSM 20650 / SLCC5334) GN=hemA PE=3 SV=1) HSP 1 Score: 76.6406 bits (187), Expect = 1.369e-13 Identity = 50/201 (24.88%), Postives = 99/201 (49.25%), Query Frame = 1 Query: 22 GRNISGLFKHAISVGKRVRTETNIXXXXXXXXXXXXELALMKLPESSHATARMLVIGAGKMGKLVIKHLVAKGCTKMVVVNRSEERVAAIREELNGVEIIYKPLSEMLSCAADADVVFTSTASEAPLFLKDHVQDLPPVEAAVGGLRLFIDISVPRNVGSCVADVETARVYNVDDLKEVVAANKEDRLRKAMEAQAIISEE 624 G ++ LF+ ++ K+V +T I E+A K S +++++GAG+M +L +++L G + ++NR++ + ++ Y+ ++ LS A D+V ST+++ P+ + +Q L ++ L IDI +PRNV + + +Y++DDL VV+AN +R + + + I E Sbjct: 135 GTLLNKLFREVVTFAKKVHHQTKINENAVSVSYAAVEVA--KKLYGSLENKKIVLVGAGEMSELALQNLAGSGIADITIINRTKANAEILADQFQAKVGTYEEMNNYLSIA---DIVLVSTSADEPIIKQKDMQILMSQKSTS---MLVIDIGLPRNVEHDCSYIPNFHLYDIDDLAGVVSANSLERQKIVLALENTIETE 327
BLAST of FC930965 vs. ExPASy Swiss-Prot
Match: HEM1_JANMA (Glutamyl-tRNA reductase OS=Janthinobacterium sp. (strain Marseille) GN=hemA PE=3 SV=1) HSP 1 Score: 76.6406 bits (187), Expect = 1.369e-13 Identity = 61/218 (27.98%), Postives = 95/218 (43.58%), Query Frame = 1 Query: 16 GFGRNISGLFKHAISVGKRVRTETNIXXXXXXXXXXXXELALMKLPESSHATARMLVIGAGKMGKLVIKHLVAKGCTKMVVVNRSEERVAAIREELNGVEIIYKPLSEMLSCAADADVVFTSTASEAPLFLKDHVQDLPPVEAAVGGLR----LFIDISVPRNVGSCVADVETARVYNVDDLKEVVAANKEDRLRKAMEAQAIISEESNSLQLGGIHW 657 G G + +F+ +V K VR+ T I L+ + S +L IGAG+M +L H A+ + + NR+ ER + NG I L + L A D+V +STAS P+ L VE A+ R +D++VPR++ + + ++ +Y VDDL V E+R +A+AII S +HW Sbjct: 143 GLGTYLHQMFQRTFAVAKEVRSTTEIGAHSVSMAAASVRLSQRIFDKISEQN--VLFIGAGEMIELSATHFAAQNPKSVTIANRTLERGQTLAHRFNGKAIRLADLPDQL---ASYDIVISSTASSLPII------GLGMVERAIKARRHKPMFMVDLAVPRDIEAEIGRLDDVFLYTVDDLGSFVQTGVENRQAAVAQAEAIIETRVRSF----MHW 345
BLAST of FC930965 vs. ExPASy Swiss-Prot
Match: HEM1_BORA1 (Glutamyl-tRNA reductase OS=Bordetella avium (strain 197N) GN=hemA PE=3 SV=1) HSP 1 Score: 76.6406 bits (187), Expect = 1.369e-13 Identity = 65/216 (30.09%), Postives = 99/216 (45.83%), Query Frame = 1 Query: 22 GRNISGLFKHAISVGKRVRTETNIXXXXXXXXXXXXELALMKLPESSHATARMLVIGAGKMGKLVIKHLVAKGCTKMVVVNRSEERVAAIREELNGVEIIYKPLSEMLSCAADADVVFTSTASEAPLFLKDHVQDLPPVEAAVGGLR----LFIDISVPRNVGSCVADVETARVYNVDDLKEVVAANKEDRLRKAMEAQAIISEESNSLQLGGIHW 657 G + LF+ +V K VR++T I LA + A R L IGAG+M +L H A+ MVV NR+ ER ++ + + L+E L A+ DVV + TAS P+ L VE A R + ID++VPR++ V ++ +Y+VDDL +V + + R ++A+AII G +HW Sbjct: 137 GTLLHQLFQRTFAVAKEVRSQTEIGAHSVSMAAAAVRLAERVFGDLGQA--RTLFIGAGEMIELCATHFAAQHPRSMVVANRTAERAESLAGRFSAGTMKLADLTERL---AEFDVVVSCTASSLPIL------GLGMVERATRQRRHRPMVMIDLAVPRDIEPEVGRLDDVYLYSVDDLGRLVQSGTDARRAAVVQAEAIIETRVQ----GFMHW 337
BLAST of FC930965 vs. ExPASy Swiss-Prot
Match: HEM1_HERAR (Glutamyl-tRNA reductase OS=Herminiimonas arsenicoxydans GN=hemA PE=3 SV=1) HSP 1 Score: 76.2554 bits (186), Expect = 1.788e-13 Identity = 61/218 (27.98%), Postives = 94/218 (43.12%), Query Frame = 1 Query: 16 GFGRNISGLFKHAISVGKRVRTETNIXXXXXXXXXXXXELALMKLPESSHATARMLVIGAGKMGKLVIKHLVAKGCTKMVVVNRSEERVAAIREELNGVEIIYKPLSEMLSCAADADVVFTSTASEAPLFLKDHVQDLPPVEAAVGGLR----LFIDISVPRNVGSCVADVETARVYNVDDLKEVVAANKEDRLRKAMEAQAIISEESNSLQLGGIHW 657 G G + +F+ +V K VR+ T I L+ S +L IGAG+M +L H A+ + + NR+ ER + NG I L + L A D+V +STAS P+ L VE A+ R +D++VPR++ + + ++ +Y VDDL V E+R +A+AII S +HW Sbjct: 143 GLGTYLHQMFQRTFAVAKEVRSNTEIGAHSVSMAAASVRLSQRIFDTISEQN--VLFIGAGEMIELCATHFAAQNPKSLTIANRTLERGETLAHRFNGRAIRLADLPDQL---ASYDIVISSTASSLPII------GLGMVERAIKARRHKPMFMVDLAVPRDIETEIGRLDDVFLYTVDDLGTFVQTGLENRQAAVTQAEAIIETRVQSF----MHW 345 The following BLAST results are available for this feature:
BLAST of FC930965 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 465
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Sequences
The
following sequences are available for this feature:
EST sequence >FC930965 ID=FC930965; Name=FC930965; organism=Citrus clementina; type=EST; length=694bpback to top |