FC930965
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC930965 vs. ExPASy Swiss-Prot
Match: HEM1_CHLPD (Glutamyl-tRNA reductase OS=Chlorobium phaeobacteroides (strain DSM 266) GN=hemA PE=3 SV=1) HSP 1 Score: 76.2554 bits (186), Expect = 1.788e-13 Identity = 55/197 (27.92%), Postives = 95/197 (48.22%), Query Frame = 1 Query: 52 AISVGKRVRTETNIXXXXXXXXXXXXELALMKLPESSHATARMLVIGAGKMGKLVIKHLVAKGCTKMVVVNRSEERVAAIREELNGVEIIYKPLSEMLSCAADADVVFTSTA------SEAPLFLKDHVQDLPPVEAAVGGLRLFIDISVPRNVGSCVADVETARVYNVDDLKEVVAANKEDRLRKAMEAQAIISEE 624 A SV K+V+T+T I ELA S+ + ++L+IGAG+ G+L KH+ K +V+ NR+ + A+ EEL +++ P + D++ T+ + SEA + + L PV + +D+ +PRNV +A ++ + ++D LK ++ N E R + + AII EE Sbjct: 145 AFSVAKKVKTKTKIMEGAVSVSYAAVELAQKIF--SNLSMKKILLIGAGETGELAAKHMFQKNARNIVITNRTLSKAEALAEELGTKKVL--PFESYKDYLHEFDIIITAVSTKEYVLSEAEMHQTMMKRRLKPV--------IILDLGLPRNVDPDIAKLQNMFLKDIDALKHIIDKNLERRSAELPKVNAIIEEE 329
BLAST of FC930965 vs. ExPASy Swiss-Prot
Match: HEM1_CAMC5 (Glutamyl-tRNA reductase OS=Campylobacter curvus (strain 525.92) GN=hemA PE=3 SV=1) HSP 1 Score: 76.2554 bits (186), Expect = 1.788e-13 Identity = 59/203 (29.06%), Postives = 100/203 (49.26%), Query Frame = 1 Query: 22 GRNISGLFKHAISVGKRVRTETNIXXXXXXXXXXXXELALMKLPESSHATARMLVIGAGKMGKLVIKHLVAKGCTKMVVVNRSEERVAAIREELNGVEIIYKPLSEMLSCAADADVVFTSTASEAPLFLKDHVQDLPPVEAAVGGLRLFIDISVPRNVGSCVADVETARVYNVDDLKEVVAANKEDRLRKAMEAQAIISEESN 630 G +IS L +A RVR ET I A + TA +VIGAG+MG+L KHL+ G ++++NRS + V + E L G + + + ++ D++F+ST++ + + ++ P E R F DI+VPR++ + + + VY+VD L+E+V N R +A A +I+ + +N Sbjct: 136 GEHISRLVHYACKCAARVRNETQISKNPISVSSVAVAKAKEIFGTLENKTA--VVIGAGEMGELAAKHLITSG-ANVIIINRSSDHVEELVENL-GDKASWDSILKLKEYINKYDLIFSSTSAPHAIITGELIE---PQEFR----RYFFDIAVPRDID--LVNTDKISVYSVDSLEEMVRRNLALREEQAQTAYSIVGQSTN 325
BLAST of FC930965 vs. ExPASy Swiss-Prot
Match: HEM11_PYRCJ (Glutamyl-tRNA reductase 1 OS=Pyrobaculum calidifontis (strain JCM 11548 / VA1) GN=hemA1 PE=3 SV=1) HSP 1 Score: 75.8702 bits (185), Expect = 2.335e-13 Identity = 63/208 (30.29%), Postives = 97/208 (46.63%), Query Frame = 1 Query: 28 NISGLFK----HAISVGKRVRTETNIXXXXXXXXXXXXELALMKLPESSHATARMLVIGAGKMGKLVIKHLVAKGCTKMVVVNRSEERVAAIREELNGVEIIYKPLSEMLSCAADADVVFTSTASEAPLFLKDHVQDLPPVEAAVGGLRLFIDISVPRNVGSCVADVETARVYNVDDLKEVVAANKEDRLRKAMEAQAIISEESNSLQ 639 N+ GL K A++VGKRVRTET I +LP + VIGAG +G+ V+K L+ G ++ VVNR+ E+ A + GVE+ + C + DVV+T+ +S P+ V +PP ++L +D+ VPRN A V +D L+E+ R + +A+ I+ EE L+ Sbjct: 117 NLRGLLKTVVERAVAVGKRVRTETGISRGPRGLGSLSIVYLSRRLPLREISVC---VIGAGAVGRGVVKELIDAGVRRVAVVNRTVEKAADL-----GVEVRPLTSENVEWCLREFDVVYTAVSSFEPV-----VVYVPPGSR----VKLVVDLGVPRN----TAPNLPVEVVTLDHLRELAEEFNRQRAEEVSKAEKIVEEEVARLE 303
BLAST of FC930965 vs. ExPASy Swiss-Prot
Match: HEM1_RALME (Glutamyl-tRNA reductase OS=Ralstonia metallidurans (strain CH34 / ATCC 43123 / DSM 2839) GN=hemA PE=3 SV=2) HSP 1 Score: 75.485 bits (184), Expect = 3.050e-13 Identity = 68/218 (31.19%), Postives = 106/218 (48.62%), Query Frame = 1 Query: 22 GRNISGLFKHAISVGKRVRTETNIXXXXXXXXXXXXELALMKLPESSHATARMLVIGAGKMGKLVIKHLVAKGCTKMVVVNRSEERVAAIREELN--GVEIIYKPLSEMLSCAADADVVFTSTASEAPLFLKDHVQDLPPVEAAVGGLR----LFIDISVPRNVGSCVADVETARVYNVDDLKEVVAANKEDRLRKAMEAQAIISEESNSLQLGGIHW 657 G ++ LF+ +V K VR +T I LA ++ ES +T R+L IGAG+M +L H A+ ++VV NR+ ER + E+L+ G+ L ++ + D+V + TAS P+ L VE AV + + +D++VPR+V VA ++ +Y VDDL VV R +A+AII +S L +HW Sbjct: 141 GTYLNQLFQRTFAVAKEVRGQTEIGAHSVSMAAAAVRLA-QRIFESV-STQRVLFIGAGEMIELCATHFAAQTPRQIVVANRTVERGEKLAEQLSEQGLTTQAIRLQDLGDRLHEFDIVVSCTASSLPII------GLGAVERAVKRRKHRPIMMVDLAVPRDVEPEVARLDDVFLYTVDDLGAVVREGNALRQAAVAQAEAII----DSRVLNFMHW 346
BLAST of FC930965 vs. ExPASy Swiss-Prot
Match: HEM1_PELLD (Glutamyl-tRNA reductase OS=Pelodictyon luteolum (strain DSM 273) GN=hemA PE=3 SV=1) HSP 1 Score: 75.485 bits (184), Expect = 3.050e-13 Identity = 53/202 (26.24%), Postives = 98/202 (48.51%), Query Frame = 1 Query: 31 ISGLFKHAISVGKRVRTETNIXXXXXXXXXXXXELALMKLPESSHATARMLVIGAGKMGKLVIKHLVAKGCTKMVVVNRSEERVAAIREELNGVEIIYKPLSEMLSCAADADVVFTSTASEAPLFLKDHVQDLPPVEAAVGGLRL----FIDISVPRNVGSCVADVETARVYNVDDLKEVVAANKEDRLRKAMEAQAIISEE 624 I+ L A SV K+V+T+T I ELA S+ + ++L++GAG+ G+L KH+ AK +V+ NR++ + A+ EEL ++ P + D++ T+ ++ KD++ + A+ RL +D+ +PRN + ++ + ++D LK ++ N E R + + +II EE Sbjct: 138 ITRLCHTAFSVAKKVKTKTKIMEGAVSVSYAAVELAQKIF--SNLSMKKILLVGAGETGELAAKHMFAKNARNIVITNRTQSKAEALAEELGTNRVL--PFESYKEHLHEFDIIITAVST------KDYIITEADMHGAMQKRRLKPVIILDLGLPRNADPEIGKLQNMFLKDIDALKHIIDKNLERRSLELPKVHSIIDEE 329
BLAST of FC930965 vs. ExPASy Swiss-Prot
Match: HEM1_METCA (Glutamyl-tRNA reductase OS=Methylococcus capsulatus GN=hemA PE=3 SV=1) HSP 1 Score: 75.485 bits (184), Expect = 3.050e-13 Identity = 55/205 (26.83%), Postives = 95/205 (46.34%), Query Frame = 1 Query: 22 GRNISGLFKHAISVGKRVRTETNIXXXXXXXXXXXXELALMKLPESSHATARMLVIGAGKMGKLVIKHLVAKGCTKMVVVNRSEERVAAIREELNGVEIIYKPLSEMLSCAADADVVFTSTASEAPLFLKDHVQDLPPVEAAVGGLR----LFIDISVPRNVGSCVADVETARVYNVDDLKEVVAANKEDRLRKAMEAQAIISEE 624 G+ ++ LF + K+VRT+T I LA + TA +++GAG+ +L +HL +++ NR+ +R + + G I + L + L A AD++ ST S P+ K E+A+ R +D++VPR++ V ++ +Y VDDL+ V N + R A++A+ II E Sbjct: 133 GKILTKLFHRTFAAAKKVRTDTAIGCSPVSVAFAAIRLAQRIFDDLGDLTA--ILVGAGETIELTARHLTENRIGHLIIANRTFDRAHTLANQFGGFAISLEELPKHL---AKADIIVASTGSPLPILGKGSF------ESALRSRRHKPMFIVDLAVPRDIEPEVEQLQDVYLYTVDDLQHTVEENLKTRQEAALQAEEIIDLE 326
BLAST of FC930965 vs. ExPASy Swiss-Prot
Match: HEM1_BORPE (Glutamyl-tRNA reductase OS=Bordetella pertussis GN=hemA PE=3 SV=1) HSP 1 Score: 75.485 bits (184), Expect = 3.050e-13 Identity = 65/216 (30.09%), Postives = 98/216 (45.37%), Query Frame = 1 Query: 22 GRNISGLFKHAISVGKRVRTETNIXXXXXXXXXXXXELALMKLPESSHATARMLVIGAGKMGKLVIKHLVAKGCTKMVVVNRSEERVAAIREELNGVEIIYKPLSEMLSCAADADVVFTSTASEAPLFLKDHVQDLPPVEAAVGGLR----LFIDISVPRNVGSCVADVETARVYNVDDLKEVVAANKEDRLRKAMEAQAIISEESNSLQLGGIHW 657 G + LF+ SV K VR++T I LA + A R L IGAG+M +L H A+ MVV NR+ ER + + + L+E L A+ DV+ + TAS P+ L VE A R + ID++VPR++ V ++ +Y+VDDL +V + + R ++A+AII G +HW Sbjct: 137 GTLLHQLFQRTFSVAKEVRSQTAIGAHSVSMAATAVRLAERVFGQLEDA--RTLFIGAGEMIELCATHFAAQRPRSMVVANRTIERAETLAGRFSAQTMKLADLTERL---AEFDVIVSCTASSLPIL------GLGMVERATRQRRHRPMVMIDLAVPRDIEPEVGRLDDVYLYSVDDLGRLVQSGTDARRAAVVQAEAIIETRVQ----GFMHW 337
BLAST of FC930965 vs. ExPASy Swiss-Prot
Match: HEM1_BORPA (Glutamyl-tRNA reductase OS=Bordetella parapertussis GN=hemA PE=3 SV=1) HSP 1 Score: 75.485 bits (184), Expect = 3.050e-13 Identity = 65/216 (30.09%), Postives = 98/216 (45.37%), Query Frame = 1 Query: 22 GRNISGLFKHAISVGKRVRTETNIXXXXXXXXXXXXELALMKLPESSHATARMLVIGAGKMGKLVIKHLVAKGCTKMVVVNRSEERVAAIREELNGVEIIYKPLSEMLSCAADADVVFTSTASEAPLFLKDHVQDLPPVEAAVGGLR----LFIDISVPRNVGSCVADVETARVYNVDDLKEVVAANKEDRLRKAMEAQAIISEESNSLQLGGIHW 657 G + LF+ SV K VR++T I LA + A R L IGAG+M +L H A+ MVV NR+ ER + + + L+E L A+ DV+ + TAS P+ L VE A R + ID++VPR++ V ++ +Y+VDDL +V + + R ++A+AII G +HW Sbjct: 137 GTLLHQLFQRTFSVAKEVRSQTAIGAHSVSMAAAAVRLAERVFGQLEDA--RTLFIGAGEMIELCATHFAAQRPRSMVVANRTIERAETLAGRFSAQTMKLADLTERL---AEFDVIVSCTASSLPIL------GLGMVERATRQRRHRPMVMIDLAVPRDIEPEVGRLDDVYLYSVDDLGRLVQSGTDARRAAVVQAEAIIETRVQ----GFMHW 337
BLAST of FC930965 vs. ExPASy Swiss-Prot
Match: HEM1_BORBR (Glutamyl-tRNA reductase OS=Bordetella bronchiseptica GN=hemA PE=3 SV=1) HSP 1 Score: 75.485 bits (184), Expect = 3.050e-13 Identity = 65/216 (30.09%), Postives = 98/216 (45.37%), Query Frame = 1 Query: 22 GRNISGLFKHAISVGKRVRTETNIXXXXXXXXXXXXELALMKLPESSHATARMLVIGAGKMGKLVIKHLVAKGCTKMVVVNRSEERVAAIREELNGVEIIYKPLSEMLSCAADADVVFTSTASEAPLFLKDHVQDLPPVEAAVGGLR----LFIDISVPRNVGSCVADVETARVYNVDDLKEVVAANKEDRLRKAMEAQAIISEESNSLQLGGIHW 657 G + LF+ SV K VR++T I LA + A R L IGAG+M +L H A+ MVV NR+ ER + + + L+E L A+ DV+ + TAS P+ L VE A R + ID++VPR++ V ++ +Y+VDDL +V + + R ++A+AII G +HW Sbjct: 137 GTLLHQLFQRTFSVAKEVRSQTAIGAHSVSMAAAAVRLAERVFGQLEDA--RTLFIGAGEMIELCATHFAAQRPRSMVVANRTIERAETLAGRFSAQTMKLADLTERL---AEFDVIVSCTASSLPIL------GLGMVERATRQRRHRPMVMIDLAVPRDIEPEVGRLDDVYLYSVDDLGRLVQSGTDARRAAVVQAEAIIETRVQ----GFMHW 337
BLAST of FC930965 vs. ExPASy Swiss-Prot
Match: HEM1_RALEJ (Glutamyl-tRNA reductase OS=Ralstonia eutropha (strain JMP134) GN=hemA PE=3 SV=2) HSP 1 Score: 75.0998 bits (183), Expect = 3.983e-13 Identity = 67/218 (30.73%), Postives = 103/218 (47.25%), Query Frame = 1 Query: 22 GRNISGLFKHAISVGKRVRTETNIXXXXXXXXXXXXELALMKLPESSHATARMLVIGAGKMGKLVIKHLVAKGCTKMVVVNRSEERVAAIREEL--NGVEIIYKPLSEMLSCAADADVVFTSTASEAPLFLKDHVQDLPPVEAAVGGLR----LFIDISVPRNVGSCVADVETARVYNVDDLKEVVAANKEDRLRKAMEAQAIISEESNSLQLGGIHW 657 G ++ LF+ +V K VR +T I LA ++ ES +T R+L IGAG+M +L H A+ ++VV NR+ ER + E+L G+ L E+ + D+V + TAS P+ L VE AV + + +D++VPR+V VA ++ +Y VDDL VV R +A+AII + +HW Sbjct: 141 GTYLNQLFQRTFAVAKEVRGQTEIGAHSVSMAAAAVRLA-QRIFESV-STQRVLFIGAGEMIELCATHFAAQKPRQVVVANRTVERGEKLAEQLAEQGLTTQAIRLQELGERLHEFDIVVSCTASSLPII------GLGAVERAVKRRKHRPIMMVDLAVPRDVEPEVARLDDVFLYTVDDLGAVVREGNALRQAAVAQAEAIIESRVQNF----MHW 346 The following BLAST results are available for this feature:
BLAST of FC930965 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 465
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Sequences
The
following sequences are available for this feature:
EST sequence >FC930965 ID=FC930965; Name=FC930965; organism=Citrus clementina; type=EST; length=694bpback to top |