FC930965
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC930965 vs. ExPASy Swiss-Prot
Match: HEM1_BURA4 (Glutamyl-tRNA reductase OS=Burkholderia ambifaria (strain MC40-6) GN=hemA PE=3 SV=1) HSP 1 Score: 74.7146 bits (182), Expect = 5.202e-13 Identity = 59/202 (29.21%), Postives = 92/202 (45.54%), Query Frame = 1 Query: 22 GRNISGLFKHAISVGKRVRTETNIXXXXXXXXXXXXELALMKLPESSHATARMLVIGAGKMGKLVIKHLVAKGCTKMVVVNRSEERVAAIREELNGVEIIYKPLSEMLSCAADADVVFTSTASEAPLFLKDHVQDLPPVEAAVGGLR----LFIDISVPRNVGSCVADVETARVYNVDDLKEVVAANKEDRLRKAMEAQAII 615 G ++ LF+ +V K VR T I LA S R+L IGAG+M +L H A+ ++V+ NR+ ER + E NG + PLS++ + + D++ + TAS P+ L VE AV R +D++VPR++ V ++ +Y VDDL +V R +A+ II Sbjct: 140 GTYLNQLFQRTFAVAKEVRGTTEIGAQSVSMAAAAVRLAQRIFETVSDQ--RVLFIGAGEMIELCATHFAAQSPRELVIANRTAERGQRLAERFNGRAM---PLSDLPTRMHEFDIIVSCTASTLPII------GLGAVERAVKARRHRPIFMVDLAVPRDIEPEVGKLKDVFLYTVDDLGAIVREGNASRQAAVAQAETII 330
BLAST of FC930965 vs. ExPASy Swiss-Prot
Match: HEM1_AZOSB (Glutamyl-tRNA reductase OS=Azoarcus sp. (strain BH72) GN=hemA PE=3 SV=1) HSP 1 Score: 74.7146 bits (182), Expect = 5.202e-13 Identity = 65/218 (29.82%), Postives = 98/218 (44.95%), Query Frame = 1 Query: 22 GRNISGLFKHAISVGKRVRTETNIXXXXXXXXXXXXELA--LMKLPESSHATARMLVIGAGKMGKLVIKHLVAKGCTKMVVVNRSEERVAAIREELNGVEIIYKPLSEMLSCAADADVVFTSTASEAPLFLKDHVQDLPPVEAAVGGLR----LFIDISVPRNVGSCVADVETARVYNVDDLKEVVAANKEDRLRKAMEAQAIISEESNSLQLGGIHW 657 G + LF++ +V K VR+ T I L + + H +L IGAG+M +L H G M V NR+E R A+ L + +++ L DVV + TAS P+ L VE AV R + +D++VPR+V V ++ +Y VDDL +VV A E R + +EA+ II + + G +HW Sbjct: 131 GTLLHKLFQNTFAVAKEVRSTTAIGANIVSMAAAAVHLTGRIFERVSDQH----VLFIGAGEMIELCAAHFAGAGPRSMTVANRTEARAEALAARLGAQTMRLDAIADALP---RFDVVVSCTASPLPIV------GLGMVERAVKVRRHRPIVMVDLAVPRDVEPEVGQLDDVFLYTVDDLAQVVDAGIESRQQAVVEAEGIIDQRVD----GFLHW 331
BLAST of FC930965 vs. ExPASy Swiss-Prot
Match: HEM1_VESOH (Glutamyl-tRNA reductase OS=Vesicomyosocius okutanii subsp. Calyptogena okutanii (strain HA) GN=hemA PE=3 SV=1) HSP 1 Score: 74.3294 bits (181), Expect = 6.794e-13 Identity = 54/196 (27.55%), Postives = 98/196 (50.00%), Query Frame = 1 Query: 40 LFKHAISVGKRVRTETNIXXXXXXXXXXXXELALMKLPESSHATARMLVIGAGKMGKLVIKHLVAKGCTKMVVVNRSEERVAAIREELNGVEIIYKPLSEMLSCAADADVVFTSTASEAPLFLKDHVQDLPPVEAAVGGLRLFIDISVPRNVGSCVADVETARVYNVDDLKEVVAANKEDRLRKAMEAQAIISEES 627 LF+HA S K+VRT+T I +L+ S T +L+IGAG+M +L ++L K + M++ NR+ E I I K S ++ AD++ +STA+ P+ K ++ ++ +DI++PR++ V ++ +Y +DDL++V+ N +R ++ AQ II +++ Sbjct: 141 LFQHAFSTAKKVRTDTQIGVSPVSIAYCSVKLSEKIFECLSEQT--VLLIGAGEMIELCAQYLNKKKVSNMIIANRTIENAQKIANLYQAQSIGLKQFSSVIH---KADIIISSTAASVPIIGKGLIESA--LKKRKHKPIFMLDIAIPRDIEPEVGQLDDIYLYTIDDLEQVINDNIGNREKEKNLAQEIIIKQN 329
BLAST of FC930965 vs. ExPASy Swiss-Prot
Match: HEM1_STAHJ (Glutamyl-tRNA reductase OS=Staphylococcus haemolyticus (strain JCSC1435) GN=hemA PE=3 SV=1) HSP 1 Score: 74.3294 bits (181), Expect = 6.794e-13 Identity = 64/212 (30.19%), Postives = 101/212 (47.64%), Query Frame = 1 Query: 4 QGVVGFGRNISGLFKHAISVGKRVRTETNIXXXXXXXXXXXXELALMKLPESSHATARMLVIGAGKMGKLVIKHLVAKGCTKMVVVNRSEERVAAIREELNGVEIIYKPLSEMLSCAADADVVFTSTASEAPLFLKDHVQDLPPVEAAVGGLRLFIDISVPRNVGSCVADVETARVYNVDDLKEVVAANKEDRLRKAMEAQAIISEESNSLQ 639 Q + G + LFK AI+ K+ ET+I ELA K + ++IGAG+M +L + +L+ G + VVNR+E + + +GV Y L + + +AD+V +ST+S + K ++ + A L IDI+VPR++ V E Y+VDDLK +V AN +R M A I S+ + +Q Sbjct: 129 QDIQTTGTIFNHLFKQAITFAKKAHNETDIADNAVSVSYAAVELA--KKVFGKLKGKQTIIIGAGEMSELSLLNLLGSGIDDITVVNRTETNAYKLATK-HGVN--YNTLESLPTLLTNADIVISSTSSPDFIVTKSMIESVNLKRKASS--LLLIDIAVPRDIEPNVNISENIFSYDVDDLKGLVDANLRER---QMAADFIASQIPDEVQ 330
BLAST of FC930965 vs. ExPASy Swiss-Prot
Match: HEM1_STACT (Glutamyl-tRNA reductase OS=Staphylococcus carnosus (strain TM300) GN=hemA PE=3 SV=1) HSP 1 Score: 74.3294 bits (181), Expect = 6.794e-13 Identity = 58/205 (28.29%), Postives = 101/205 (49.27%), Query Frame = 1 Query: 22 GRNISGLFKHAISVGKRVRTETNIXXXXXXXXXXXXELALMKLP--ESSHATARMLVIGAGKMGKLVIKHLVAKGCTKMVVVNRSEERVAAIREELNGVEIIYKPLSEMLSCAADADVVFTSTASEAPLFLKDHVQDLPPVEAAVGGLRLFIDISVPRNVGSCVADVETARVYNVDDLKEVVAANKEDRLRKAMEAQAIISEESN 630 G + LFK AI+ KR ET+I ELA +S HA +++GAG+M +L + +L+ G + VVNR++ER + E+ + Y LS + +AD+V +ST+++ + ++ + ++ ++ + IDI+VPR++ + Y++DDLK +V AN +R A + I E N Sbjct: 135 GTIFNHLFKQAITFAKRAHHETDIADNAVSVSYAAVELAKKVFGNLKSKHA----VIVGAGEMSELSLLNLLGAGIDNITVVNRTKERAQQLAEK---HQTQYADLSNLNELLVNADIVISSTSAQNYVITQEMMNNV--LDQRRHEPMVLIDIAVPRDIDPAIELDMNVFSYDIDDLKGLVDANLRERQAAADQIAEQIPAEIN 330
BLAST of FC930965 vs. ExPASy Swiss-Prot
Match: HEM1_HERA2 (Glutamyl-tRNA reductase OS=Herpetosiphon aurantiacus (strain ATCC 23779 / DSM 785) GN=hemA PE=3 SV=1) HSP 1 Score: 74.3294 bits (181), Expect = 6.794e-13 Identity = 53/201 (26.37%), Postives = 103/201 (51.24%), Query Frame = 1 Query: 22 GRNISGLFKHAISVGKRVRTETNIXXXXXXXXXXXXELALMKLPESSHATARMLVIGAGKMGKLVIKHLVAKGCTKMVVVNRSEERVAAIREELNGVEIIYKPLSEMLSCAADADVVFTSTASEAPLFLKDHVQDLPPVEAAVGGLRLFIDISVPRNVGSCVADVETARVYNVDDLKEVVAANKEDRLRKAMEAQAIISEE 624 G + L + A++ GK VRTET + LA L ++ + +++IGAG+ G+L +KH + + + + V++R+ ER A + E ++ KP+SE+ + +DVV + T+S + + Q L +A + +D++VPR++ V + +Y+VDD++ + N+ + + A+AI+ E Sbjct: 132 GTTMHRLIQAALTTGKLVRTETQLAHAQLSVVSVGLSLARQHLDLTNRS---VVIIGAGRTGELALKHYL-EYTSNITVLSRTFERAARLAEHH---KVAAKPISELAAVLQASDVVISCTSSPELMLDFEQAQLL---QAQRQRQWVLLDLAVPRDIDRHVGALPEVWLYDVDDMQAICERNRASKAAEVAGAEAIVERE 322
BLAST of FC930965 vs. ExPASy Swiss-Prot
Match: HEM1_CLONN (Glutamyl-tRNA reductase OS=Clostridium novyi (strain NT) GN=hemA PE=3 SV=1) HSP 1 Score: 74.3294 bits (181), Expect = 6.794e-13 Identity = 55/205 (26.83%), Postives = 104/205 (50.73%), Query Frame = 1 Query: 31 ISGLFKHAISVGKRVRTETNIXXXXXXXXXXXXELALMKLPESSHATAR---MLVIGAGKMGKLVIKHLVAKGCTKMVVVNRSEERVAAIREELNGVEII-YKPLSEMLSCAADADVVFTSTASEAPLFLKDHVQDLPPVEAAVGGLRLFI-DISVPRNVGSCVADVETARVYNVDDLKEVVAANKEDRLRKAMEAQAIISEESN 630 ++ LF+ AI+ K++++E I +KL E + T + +IGAG MG+L +KHL+ + ++ V NR+ V + +E +++I Y+ E+L + D++ T+TA+ + K+ +Q++ L+I D+++PR+V D+E +Y+VDD K + +NK R ++ A+ I N Sbjct: 135 LNKLFREAITSAKKIKSELKISETPISMVYIA-----IKLLEKNIGTLKGKKACIIGAGDMGRLALKHLINEELEEIFVANRTYNNVIDLLKEFPKIKLIDYEKKYEILD---NVDILITATAAPHLIIKKEQLQNIKQ--------ELYIMDLALPRDVEKSAGDIENIHLYDVDDFKNISDSNKIKREELSLIAKDSIDSYVN 323
BLAST of FC930965 vs. ExPASy Swiss-Prot
Match: HEM1_NOCFA (Glutamyl-tRNA reductase OS=Nocardia farcinica GN=hemA PE=3 SV=1) HSP 1 Score: 73.559 bits (179), Expect = 1.159e-12 Identity = 66/208 (31.73%), Postives = 98/208 (47.12%), Query Frame = 1 Query: 22 GRNISGLFKHAISVGKRVRTETNIXXXXXXXXXXXXELALMKLPESSHATARMLVIGAGKMGKLVIKHLVAKGCTKMVVVNRSEERVAAIREEL--NGVEIIYKPLSEMLSCAADADVVFTST-ASEAPLFLKD---HVQDLPPVEAAVGGLRL-FIDISVPRNVGSCVADVETARVYNVDDLKEVVAANKEDRLRKAMEAQAIISEE 624 GR + L +HA+ VGKRV +ET I + A L + + TA +V+GAG MG L + HL G +++VVNR+ ER + E GVE L + + ADVV + T A A + L D + D E G L F D+ +PR+V VA + V +++ L+ AA A++I++EE Sbjct: 135 GRTLHELAQHALRVGKRVHSETGIDRAGASVVSVALDRAAQVLGDLAGRTA--VVVGAGAMGGLSVAHLARAGIGRIIVVNRTIERARRLAETAASYGVESSALELDRLHEAMSAADVVLSCTGAVGAVVTLADTHRALADRDRAEFPAGDRPLVFCDLGLPRDVEPAVAGLPGVAVIDIESLQRDPAAGA--AADDTAAARSIVAEE 338
BLAST of FC930965 vs. ExPASy Swiss-Prot
Match: HEM1_AZOSE (Glutamyl-tRNA reductase OS=Azoarcus sp. (strain EbN1) GN=hemA PE=3 SV=1) HSP 1 Score: 73.559 bits (179), Expect = 1.159e-12 Identity = 61/216 (28.24%), Postives = 97/216 (44.91%), Query Frame = 1 Query: 22 GRNISGLFKHAISVGKRVRTETNIXXXXXXXXXXXXELALMKLPESSHATARMLVIGAGKMGKLVIKHLVAKGCTKMVVVNRSEERVAAIREELNGVEIIYKPLSEMLSCAADADVVFTSTASEAPLFLKDHVQDLPPVEAAVGGLR----LFIDISVPRNVGSCVADVETARVYNVDDLKEVVAANKEDRLRKAMEAQAIISEESNSLQLGGIHW 657 G + LF++ +V K VR+ T I L+ S R+L IGAG+M +L + ++ V NR+E R + + + EML DVV + TAS P+ L VE A+ R + +D++VPR++ + V +++ +Y VDDL ++V A E R + +EA+ II N G +HW Sbjct: 131 GTLLHKLFQNTFAVAKEVRSTTAIGANIVSMAAAALHLSERIFERMSDQ--RVLFIGAGEMIELCAAYFAGACPKRIAVANRTEARAQLVAHRFGAEVMRLDVVGEMLP---HFDVVVSCTASPLPIV------GLGMVERAIKARRHRPIVMVDLAVPRDIEAEVGELDDVFLYTVDDLAQIVDAGLESRQQAVLEAEEIIDSRVN----GFLHW 331
BLAST of FC930965 vs. ExPASy Swiss-Prot
Match: HEM12_PYRCJ (Glutamyl-tRNA reductase 2 OS=Pyrobaculum calidifontis (strain JCM 11548 / VA1) GN=hemA2 PE=3 SV=1) HSP 1 Score: 73.559 bits (179), Expect = 1.159e-12 Identity = 61/196 (31.12%), Postives = 102/196 (52.04%), Query Frame = 1 Query: 46 KHAISVGKRVRTETNIXXXXXXXXXXXXELALMKLPESSHAT-ARMLVIGAGKMGKLVIKHLVAKGCTKMVVVNRSEERVAAIREELNGVEIIYKPLS--EMLSCAADADVVFTSTASEAPLFLKDHVQDLPPVEAAVGGLRLFIDISVPRNVGSCVADVETARVYNVDDLKEVVAANKEDRLRKAMEAQAIISEE 624 + A+ VGKRVRTET I LA+M + A + V+GAG +G + L A+G ++VV+NR+ E+ + + G +PL+ E+ C A+ DVVF+S + P+ ++ +PP EA V ++ +D+ VP +V V ++ A V ++DL+E+ +R + +A AI+ EE Sbjct: 132 ERAVRVGKRVRTETGISRGPRGLG----SLAVMYVSRMLDLREASVAVLGAGAVGAGLAMELAARGVKRLVVLNRTYEKAVEVANRVGGEA---RPLTEEEVEKCLAECDVVFSSVHTLQPV-----IKRVPP-EARV---KVIVDLGVPSSV---VPNLPVA-VVKIEDLRELAEEYNRERAGEVEKAWAIVDEE 307 The following BLAST results are available for this feature:
BLAST of FC930965 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 465
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >FC930965 ID=FC930965; Name=FC930965; organism=Citrus clementina; type=EST; length=694bpback to top |