FC930965
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC930965 vs. ExPASy Swiss-Prot
Match: HEM1_MYCTA (Glutamyl-tRNA reductase OS=Mycobacterium tuberculosis (strain ATCC 25177 / H37Ra) GN=hemA PE=3 SV=1) HSP 1 Score: 67.781 bits (164), Expect = 6.359e-11 Identity = 60/193 (31.09%), Postives = 87/193 (45.08%), Query Frame = 1 Query: 22 GRNISGLFKHAISVGKRVRTETNIXXXXXXXXXXXXELALMKLPESSHATARMLVIGAGKMGKLVIKHLVAKGCTKMVVVNRSEERVAAIREEL--NGVEIIYKPLSEMLSCAADADVVFTSTASEAPLFLKDHVQDLPPVEAAVGGLR--------LFIDISVPRNVGSCVADVETARVYNVDDLKEVVAAN 570 GR + L + A+SVGKRV +ET I +A KL + TA +VIGAG MG L HL G + V+NRS R + + +GV L + + ADADVV + T + P V L V A+ R + D+ +PR+V VA + V +VD ++ +A+ Sbjct: 135 GRVLHELAQRALSVGKRVHSETAIDAAGASVVSVALGMAERKLGSLAGTTA--VVIGAGAMGALSAVHLTRAGVGHIQVLNRSLSRAQRLARRIRESGVPAEALALDRLANVLADADVVVSCTGAVRP------VVSLADVHHALAAARRDEATRPLVICDLGMPRDVDPAVARLPCVWVVDVDSVQHEPSAH 319
BLAST of FC930965 vs. ExPASy Swiss-Prot
Match: HEM1_MYCBT (Glutamyl-tRNA reductase OS=Mycobacterium bovis (strain BCG / Tokyo 172 / ATCC 35737 / TMC 1019) GN=hemA PE=3 SV=1) HSP 1 Score: 67.781 bits (164), Expect = 6.359e-11 Identity = 60/193 (31.09%), Postives = 87/193 (45.08%), Query Frame = 1 Query: 22 GRNISGLFKHAISVGKRVRTETNIXXXXXXXXXXXXELALMKLPESSHATARMLVIGAGKMGKLVIKHLVAKGCTKMVVVNRSEERVAAIREEL--NGVEIIYKPLSEMLSCAADADVVFTSTASEAPLFLKDHVQDLPPVEAAVGGLR--------LFIDISVPRNVGSCVADVETARVYNVDDLKEVVAAN 570 GR + L + A+SVGKRV +ET I +A KL + TA +VIGAG MG L HL G + V+NRS R + + +GV L + + ADADVV + T + P V L V A+ R + D+ +PR+V VA + V +VD ++ +A+ Sbjct: 135 GRVLHELAQRALSVGKRVHSETAIDAAGASVVSVALGMAERKLGSLAGTTA--VVIGAGAMGALSAVHLTRAGVGHIQVLNRSLSRAQRLARRIRESGVPAEALALDRLANVLADADVVVSCTGAVRP------VVSLADVHHALAAARRDEATRPLVICDLGMPRDVDPAVARLPCVWVVDVDSVQHEPSAH 319
BLAST of FC930965 vs. ExPASy Swiss-Prot
Match: HEM1_MYCBP (Glutamyl-tRNA reductase OS=Mycobacterium bovis (strain BCG / Pasteur 1173P2) GN=hemA PE=3 SV=1) HSP 1 Score: 67.781 bits (164), Expect = 6.359e-11 Identity = 60/193 (31.09%), Postives = 87/193 (45.08%), Query Frame = 1 Query: 22 GRNISGLFKHAISVGKRVRTETNIXXXXXXXXXXXXELALMKLPESSHATARMLVIGAGKMGKLVIKHLVAKGCTKMVVVNRSEERVAAIREEL--NGVEIIYKPLSEMLSCAADADVVFTSTASEAPLFLKDHVQDLPPVEAAVGGLR--------LFIDISVPRNVGSCVADVETARVYNVDDLKEVVAAN 570 GR + L + A+SVGKRV +ET I +A KL + TA +VIGAG MG L HL G + V+NRS R + + +GV L + + ADADVV + T + P V L V A+ R + D+ +PR+V VA + V +VD ++ +A+ Sbjct: 135 GRVLHELAQRALSVGKRVHSETAIDAAGASVVSVALGMAERKLGSLAGTTA--VVIGAGAMGALSAVHLTRAGVGHIQVLNRSLSRAQRLARRIRESGVPAEALALDRLANVLADADVVVSCTGAVRP------VVSLADVHHALAAARRDEATRPLVICDLGMPRDVDPAVARLPCVWVVDVDSVQHEPSAH 319
BLAST of FC930965 vs. ExPASy Swiss-Prot
Match: HEM1_MYCBO (Glutamyl-tRNA reductase OS=Mycobacterium bovis GN=hemA PE=3 SV=1) HSP 1 Score: 67.781 bits (164), Expect = 6.359e-11 Identity = 60/193 (31.09%), Postives = 87/193 (45.08%), Query Frame = 1 Query: 22 GRNISGLFKHAISVGKRVRTETNIXXXXXXXXXXXXELALMKLPESSHATARMLVIGAGKMGKLVIKHLVAKGCTKMVVVNRSEERVAAIREEL--NGVEIIYKPLSEMLSCAADADVVFTSTASEAPLFLKDHVQDLPPVEAAVGGLR--------LFIDISVPRNVGSCVADVETARVYNVDDLKEVVAAN 570 GR + L + A+SVGKRV +ET I +A KL + TA +VIGAG MG L HL G + V+NRS R + + +GV L + + ADADVV + T + P V L V A+ R + D+ +PR+V VA + V +VD ++ +A+ Sbjct: 135 GRVLHELAQRALSVGKRVHSETAIDAAGASVVSVALGMAERKLGSLAGTTA--VVIGAGAMGALSAVHLTRAGVGHIQVLNRSLSRAQRLARRIRESGVPAEALALDRLANVLADADVVVSCTGAVRP------VVSLADVHHALAAARRDEATRPLVICDLGMPRDVDPAVARLPCVWVVDVDSVQHEPSAH 319
BLAST of FC930965 vs. ExPASy Swiss-Prot
Match: HEM1_VEREI (Glutamyl-tRNA reductase OS=Verminephrobacter eiseniae (strain EF01-2) GN=hemA PE=3 SV=1) HSP 1 Score: 67.3958 bits (163), Expect = 8.306e-11 Identity = 60/216 (27.78%), Postives = 89/216 (41.20%), Query Frame = 1 Query: 22 GRNISGLFKHAISVGKRVRTETNIXXXXXXXXXXXXELALMKLPESSHATARMLVIGAGKMGKLVIKHLVAKGCTKMVVVNRSEERVAAIREELNGVEIIYKPLSEMLSCAADADVVFTSTASEAPLFLKDHVQDLPPVEAAVGGLR----LFIDISVPRNVGSCVADVETARVYNVDDLKEVVAANKEDRLRKAMEAQAIISEESNSLQLGGIHW 657 G ++ LF+ + +V K VR+ T I LA + S R+L +GAG M L H AK + + NR+ ER + + L E L + D V + TAS P+ L VE A+ R +D++VPR++ V + +Y VDDL VV + R +A+AII S +HW Sbjct: 136 GSTLNQLFQRSFAVAKEVRSSTEIGAHSISMAAAAVRLAGQLFEDLSQI--RVLFVGAGAMIALCATHFAAKNPLGLALANRTLERGEQLAARFGATVLRLADLPERLH---EFDAVISCTASSLPII------GLGAVERALKKRRHRPMFMVDLAVPRDIEPEVKALGDVYLYTVDDLASVVQTGQASRQAAVAQAEAIIDAGVQSF----MHW 336 The following BLAST results are available for this feature:
BLAST of FC930965 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 465
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >FC930965 ID=FC930965; Name=FC930965; organism=Citrus clementina; type=EST; length=694bpback to top |