FC930965
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC930965 vs. ExPASy Swiss-Prot
Match: HEM1_ALISL (Glutamyl-tRNA reductase OS=Aliivibrio salmonicida (strain LFI1238) GN=hemA PE=3 SV=1) HSP 1 Score: 115.546 bits (288), Expect = 2.659e-25 Identity = 76/203 (37.44%), Postives = 114/203 (56.16%), Query Frame = 1 Query: 31 ISGLFKHAISVGKRVRTETNIXXXXXXXXXXXXELALMKLPESSHATARMLVIGAGKMGKLVIKHLVAKGCTKMVVVNRSEERVAAIREELNGVEIIYKPLSEMLSCAADADVVFTSTASEAPLFLKDHVQDLPPVEAAVGGLR----LFIDISVPRNVGSCVADVETARVYNVDDLKEVVAANKEDRLRKAMEAQAIISEES 627 + LF+ SV KRVRTETNI LA + +T ++++GAG+ +LV KHL GC +++V NR+ ER + ++ N I + E LS AD++ +STAS P+ K V E+A+ R LF+DI+VPR++ S VAD+ +Y+VDDLK ++ N E R +A++A+AI+SEES Sbjct: 137 VEKLFQSDFSVAKRVRTETNIGGNAVSVAYAACTLARQIFESLAEST--VMLVGAGETIELVAKHLNDAGCKQLIVANRTRERAMILADQFNADVISLPEIPEHLS---KADIIISSTASPLPIIGKGMV------ESALKQRRHQPMLFVDIAVPRDIESEVADLNDVYLYSVDDLKSIIDHNIEQRKIEAIQAEAIVSEES 328
BLAST of FC930965 vs. ExPASy Swiss-Prot
Match: HEM1_VIBVU (Glutamyl-tRNA reductase OS=Vibrio vulnificus GN=hemA PE=3 SV=1) HSP 1 Score: 115.161 bits (287), Expect = 3.473e-25 Identity = 77/204 (37.75%), Postives = 115/204 (56.37%), Query Frame = 1 Query: 28 NISGLFKHAISVGKRVRTETNIXXXXXXXXXXXXELALMKLPESSHATARMLVIGAGKMGKLVIKHLVAKGCTKMVVVNRSEERVAAIREELNGVEIIYKPLSEMLSCAADADVVFTSTASEAPLFLKDHVQDLPPVEAAVGGLR----LFIDISVPRNVGSCVADVETARVYNVDDLKEVVAANKEDRLRKAMEAQAIISEES 627 ++ LF+ SV KRVRTET+I LA +T +L++GAG+ +LV KHL A GC+KM+V NR+ ER + E+ + I L E+ + A AD+V +STAS P+ K V E A+ R L +DI+VPR+V + V D+ A +Y VDDL+ ++ +N E R +A++A+AI++EES Sbjct: 135 SLEKLFQKTFSVAKRVRTETDIGGNAVSVAYAACTLAKHIFESLEKST--VLLVGAGETIELVAKHLHANGCSKMIVANRTRERALTLAEQFDAQVI---SLQEIPNHLAKADIVISSTASPLPIIGKGMV------ETALKQRRHQPMLLVDIAVPRDVEAQVGDLNDAYLYTVDDLQSIIDSNIEQRKVEAIQAEAIVAEES 327
BLAST of FC930965 vs. ExPASy Swiss-Prot
Match: HEM1_VIBCM (Glutamyl-tRNA reductase OS=Vibrio cholerae serotype O1 (strain M66-2) GN=hemA PE=3 SV=1) HSP 1 Score: 114.39 bits (285), Expect = 5.925e-25 Identity = 76/196 (38.78%), Postives = 114/196 (58.16%), Query Frame = 1 Query: 40 LFKHAISVGKRVRTETNIXXXXXXXXXXXXELALMKLPESSHATARMLVIGAGKMGKLVIKHLVAKGCTKMVVVNRSEERVAAIREELNGVEIIYKPLSEMLSCAADADVVFTSTASEAPLFLKDHVQDLPPVEAAVGGLRLFIDISVPRNVGSCVADVETARVYNVDDLKEVVAANKEDRLRKAMEAQAIISEES 627 LF+ A SV KRVRTET I LA K S A A +L++GAG+ +LV KHL C +M+V NR+ ER ++ ++ G ++I L+E+ A AD+V +STAS P+ K V+ ++A L +DI+VPR++ V + A +Y+VDDL+ +V +N E R +A++A+AI+SEES Sbjct: 139 LFQKAFSVAKRVRTETEIGGSAVSVAYAACTLA--KHIFESLADATVLLVGAGETIELVAKHLAGHHCKRMIVANRTRERALSLAQQF-GADVI--ALNEIPDYLAQADIVISSTASPLPIIGKGMVESA--LKARRHQPMLLVDIAVPRDIEPQVGKLNDAYLYSVDDLQSIVDSNIEQRKVEAIQAEAIVSEES 327
BLAST of FC930965 vs. ExPASy Swiss-Prot
Match: HEM1_VIBCH (Glutamyl-tRNA reductase OS=Vibrio cholerae GN=hemA PE=3 SV=1) HSP 1 Score: 114.39 bits (285), Expect = 5.925e-25 Identity = 76/196 (38.78%), Postives = 114/196 (58.16%), Query Frame = 1 Query: 40 LFKHAISVGKRVRTETNIXXXXXXXXXXXXELALMKLPESSHATARMLVIGAGKMGKLVIKHLVAKGCTKMVVVNRSEERVAAIREELNGVEIIYKPLSEMLSCAADADVVFTSTASEAPLFLKDHVQDLPPVEAAVGGLRLFIDISVPRNVGSCVADVETARVYNVDDLKEVVAANKEDRLRKAMEAQAIISEES 627 LF+ A SV KRVRTET I LA K S A A +L++GAG+ +LV KHL C +M+V NR+ ER ++ ++ G ++I L+E+ A AD+V +STAS P+ K V+ ++A L +DI+VPR++ V + A +Y+VDDL+ +V +N E R +A++A+AI+SEES Sbjct: 139 LFQKAFSVAKRVRTETEIGGSAVSVAYAACTLA--KHIFESLADATVLLVGAGETIELVAKHLAGHHCKRMIVANRTRERALSLAQQF-GADVI--ALNEIPDYLAQADIVISSTASPLPIIGKGMVESA--LKARRHQPMLLVDIAVPRDIEPQVGKLNDAYLYSVDDLQSIVDSNIEQRKVEAIQAEAIVSEES 327
BLAST of FC930965 vs. ExPASy Swiss-Prot
Match: HEM1_VIBC3 (Glutamyl-tRNA reductase OS=Vibrio cholerae serotype O1 (strain ATCC 39541 / Ogawa 395 / O395) GN=hemA PE=3 SV=1) HSP 1 Score: 114.39 bits (285), Expect = 5.925e-25 Identity = 76/196 (38.78%), Postives = 114/196 (58.16%), Query Frame = 1 Query: 40 LFKHAISVGKRVRTETNIXXXXXXXXXXXXELALMKLPESSHATARMLVIGAGKMGKLVIKHLVAKGCTKMVVVNRSEERVAAIREELNGVEIIYKPLSEMLSCAADADVVFTSTASEAPLFLKDHVQDLPPVEAAVGGLRLFIDISVPRNVGSCVADVETARVYNVDDLKEVVAANKEDRLRKAMEAQAIISEES 627 LF+ A SV KRVRTET I LA K S A A +L++GAG+ +LV KHL C +M+V NR+ ER ++ ++ G ++I L+E+ A AD+V +STAS P+ K V+ ++A L +DI+VPR++ V + A +Y+VDDL+ +V +N E R +A++A+AI+SEES Sbjct: 139 LFQKAFSVAKRVRTETEIGGSAVSVAYAACTLA--KHIFESLADATVLLVGAGETIELVAKHLAGHHCKRMIVANRTRERALSLAQQF-GADVI--ALNEIPDYLAQADIVISSTASPLPIIGKGMVESA--LKARRHQPMLLVDIAVPRDIEPQVGKLNDAYLYSVDDLQSIVDSNIEQRKVEAIQAEAIVSEES 327
BLAST of FC930965 vs. ExPASy Swiss-Prot
Match: HEM1_GLOVI (Glutamyl-tRNA reductase OS=Gloeobacter violaceus GN=hemA PE=3 SV=1) HSP 1 Score: 114.39 bits (285), Expect = 5.925e-25 Identity = 69/203 (33.99%), Postives = 116/203 (57.14%), Query Frame = 1 Query: 16 GFGRNISGLFKHAISVGKRVRTETNIXXXXXXXXXXXXELALMKLPESSHATARMLVIGAGKMGKLVIKHLVAKGCTKMVVVNRSEERVAAIREELNGVEIIYKPLSEMLSCAADADVVFTSTASEAPLFLKDHVQDLPPVEAAVGGLRLFIDISVPRNVGSCVADVETARVYNVDDLKEVVAANKEDRLRKAMEAQAIISEE 624 G R ++ LFK AI+ GKRVR++TNI E+AL K + R LV+GAGKMG+L+++HL+AKG +++V+NRS E+ A + E+ G+ + + E+ + +D++FT T + PL + + L ++ + DI+VPRNV + V ++ +++NVD LK+VV N+ R + + I+ E+ Sbjct: 133 GVDRVLNQLFKTAITAGKRVRSDTNIGTGAVSVSSAAVEMALRK--KGPLHNQRCLVVGAGKMGELLVRHLLAKGARQIIVLNRSLEKAAQMVEQF-GLMLPVATVDELTNYVPCSDLIFTCTGATEPLLTLEKMSSLRRDQSL-----MIFDIAVPRNVATEVDELPNVQLFNVDHLKQVVEENRAYRQLMVTQCEEILLEQ 327
BLAST of FC930965 vs. ExPASy Swiss-Prot
Match: HEM1_PERMH (Glutamyl-tRNA reductase OS=Persephonella marina (strain DSM 14350 / EX-H1) GN=hemA PE=3 SV=1) HSP 1 Score: 112.849 bits (281), Expect = 1.724e-24 Identity = 70/209 (33.49%), Postives = 110/209 (52.63%), Query Frame = 1 Query: 31 ISGLFKHAISVGKRVRTETNIXXXXXXXXXXXXELALMKLPESSHATARMLVIGAGKMGKLVIKHLVAKGCTKMVVVNRSEERVAAIREELNGVEIIYKPLSEMLSCAADADVVFTSTASEAPLFLKDHVQDLPPVEAAVGGLRLFIDISVPRNVGSCVADVETARVYNVDDLKEVVAANKEDRLRKAMEAQAIISEESNSLQLGGIHW 657 ++ LF A++V K++RT T I ELA + S +L++GAG+M +L +HL + G + V NR+ E+ + EE G I + L E L ++D+V ST ++ P+ K+H +++ + G IDISVPRNV V DV+ +YN+DDLK VV N E+R A+ A+ ++ EE + + HW Sbjct: 138 LTRLFDKALNVSKKIRTSTGISKRAVSISYAAVELAKKIFGDLSDKN--VLLLGAGEMAELAARHLSSSGVKHIFVSNRTFEKAVQLAEEFGGSAIRFDKLFEFLP---ESDIVIVSTGAKEPILRKEHFEEINRIRK--GDPVFIIDISVPRNVAEDVNDVDNVYLYNIDDLKVVVDKNLEERKLAALSAEMMLDEEVHKFE----HW 335
BLAST of FC930965 vs. ExPASy Swiss-Prot
Match: HEM1_VIBVY (Glutamyl-tRNA reductase OS=Vibrio vulnificus (strain YJ016) GN=hemA PE=3 SV=1) HSP 1 Score: 111.309 bits (277), Expect = 5.016e-24 Identity = 75/204 (36.76%), Postives = 113/204 (55.39%), Query Frame = 1 Query: 28 NISGLFKHAISVGKRVRTETNIXXXXXXXXXXXXELALMKLPESSHATARMLVIGAGKMGKLVIKHLVAKGCTKMVVVNRSEERVAAIREELNGVEIIYKPLSEMLSCAADADVVFTSTASEAPLFLKDHVQDLPPVEAAVGGLR----LFIDISVPRNVGSCVADVETARVYNVDDLKEVVAANKEDRLRKAMEAQAIISEES 627 ++ LF+ SV KRVRTET+I LA +T +L++GAG+ +LV KHL A GC+KM+V NR+ ER + E+ + I + + L A AD+V +STAS P+ K V E A+ R L +DI+VPR+V + V ++ A +Y VDDL+ ++ N E R +A++A+AI++EES Sbjct: 135 SLEKLFQKTFSVAKRVRTETDIGGNAVSVAYAACTLAKHIFESLEKST--VLLVGAGETIELVAKHLHANGCSKMIVANRTRERALTLAEQFDAQVISLQDIPNHL---AKADIVISSTASPLPIIGKGMV------ETALKQRRHQPMLLVDIAVPRDVEAQVGELNDAYLYTVDDLQSIIDNNIEQRKVEAIQAEAIVAEES 327
BLAST of FC930965 vs. ExPASy Swiss-Prot
Match: HEM1_PELTS (Glutamyl-tRNA reductase OS=Pelotomaculum thermopropionicum (strain DSM 13744 / JCM 10971 / SI) GN=hemA PE=3 SV=1) HSP 1 Score: 111.309 bits (277), Expect = 5.016e-24 Identity = 71/200 (35.50%), Postives = 111/200 (55.50%), Query Frame = 1 Query: 25 RNISGLFKHAISVGKRVRTETNIXXXXXXXXXXXXELALMKLPESSHATARMLVIGAGKMGKLVIKHLVAKGCTKMVVVNRSEERVAAIREELNGVEIIYKPLSEMLSCAADADVVFTSTASEAPLFLKDHVQDLPPVEAAVGGLRLFIDISVPRNVGSCVADVETARVYNVDDLKEVVAANKEDRLRKAMEAQAIISEE 624 R ++ LF+ AI+VGKRVRTET I ELA L S +LVIGAGKM +L +HLVA G + ++V NRS ER A+ E+ G + + E+ C AD+V + TA+ + + V + ++ G +DI+VPR++ + V ++ ++++DDLK V+ N +R + A++A+ II EE Sbjct: 136 RVLNTLFQQAITVGKRVRTETGIDRNAVSISYAAVELARQHL--GSLDGRSVLVIGAGKMSELTARHLVANGVSSVIVSNRSFERAVALAEQFRGRAVRF---DELYRCMEAADIVISCTAASHCVVKAEEVSRV--MDKRRGRAIFMVDIAVPRDIEAEVGNLAGVTLFDIDDLKNVIDQNLAERKQAAVKAEEIIEEE 328
BLAST of FC930965 vs. ExPASy Swiss-Prot
Match: HEM1_DESRM (Glutamyl-tRNA reductase OS=Desulfotomaculum reducens (strain MI-1) GN=hemA PE=3 SV=1) HSP 1 Score: 110.153 bits (274), Expect = 1.117e-23 Identity = 70/200 (35.00%), Postives = 114/200 (57.00%), Query Frame = 1 Query: 31 ISGLFKHAISVGKRVRTETNIXXXXXXXXXXXXELALMKLPESSHATARMLVIGAGKMGKLVIKHLVAKGCTKMVVVNRSEERVAAIREELNGVEIIYKPLSEMLSCAADADVVFTSTASEAPLFLKDHVQDLPPVEAAVGGLRLFIDISVPRNVGSCVADVETARVYNVDDLKEVVAANKEDRLRKAMEAQAIISEESN 630 ++ LF+ AI+ GKRVRTET I ELA S + +LV+GAG+M +L + +LVA G + ++V NRS +R + E+ +G + + L + ++ AD+V +STA++ + +Q + +E V + IDI+VPR++ V + ++Y+VD L+ VV AN E+R R A++A+ II EE N Sbjct: 138 LNTLFQQAITTGKRVRTETGIDQNPVSIPYAAVELAKQGFGTLSGRS--VLVVGAGEMSELTVVNLVANGVSSVIVSNRSYDRAVQLAEKFDGTAVKFDQLFQYMN---RADIVISSTAAQHYVIKTSDMQKV--MEQRVDQPIMMIDIAVPRDIDPEVRRIPNVKLYDVDHLQNVVDANLEERRRAAVQAEGIIEEELN 330 The following BLAST results are available for this feature:
BLAST of FC930965 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 465
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Sequences
The
following sequences are available for this feature:
EST sequence >FC930965 ID=FC930965; Name=FC930965; organism=Citrus clementina; type=EST; length=694bpback to top |