FC930965
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC930965 vs. ExPASy Swiss-Prot
Match: HEM1_MYXXD (Glutamyl-tRNA reductase OS=Myxococcus xanthus (strain DK 1622) GN=hemA PE=3 SV=1) HSP 1 Score: 108.227 bits (269), Expect = 4.246e-23 Identity = 71/208 (34.13%), Postives = 106/208 (50.96%), Query Frame = 1 Query: 1 GQGVVGFGRNISGLFKHAISVGKRVRTETNIXXXXXXXXXXXXELALMKLPESSHATARMLVIGAGKMGKLVIKHLVAKGCTKMVVVNRSEERVAAIREELNGVEIIYKPLSEMLSCAADADVVFTSTASEAPLFLKDHVQDLPPVEAAVGGLRLFIDISVPRNVGSCVADVETARVYNVDDLKEVVAANKEDRLRKAMEAQAIISEE 624 GQG + A S KRVRTET I +LA + T +LV+GAG+MG+L +HL G +K+ V NR+ R A+ E+ G +P E+L A ADVV STAS+APLF +D+V L G +D++VPR++ V ++ Y+VDD+++ VA N R +A +A ++++E Sbjct: 123 GQGAGAVRGELMRACAAAFSCAKRVRTETAIGRAATSMAAAAVQLASKVFDGLAGKT--VLVVGAGEMGELAARHLKQAGASKLYVTNRTLSRAEALAAEVGGQA---RPFEELLGLVAAADVVVCSTASQAPLFTRDNVGALG--RGRRGRPLFMVDLAVPRDIDPAVGTLDWVHAYDVDDIQKFVADNAAARAEEAQKAGVLVAQE 323
BLAST of FC930965 vs. ExPASy Swiss-Prot
Match: HEM1_GEOKA (Glutamyl-tRNA reductase OS=Geobacillus kaustophilus GN=hemA PE=3 SV=1) HSP 1 Score: 107.842 bits (268), Expect = 5.545e-23 Identity = 71/202 (35.15%), Postives = 109/202 (53.96%), Query Frame = 1 Query: 22 GRNISGLFKHAISVGKRVRTETNIXXXXXXXXXXXXELALMKLPESSHATARMLVIGAGKMGKLVIKHLVAKGCTKMVVVNRSEERVAAIREELNGVEIIYKPLSEMLSCAADADVVFTSTASEAPLFLKDHVQDLPPVEAAVGGLRLF-IDISVPRNVGSCVADVETARVYNVDDLKEVVAANKEDRLRKAMEAQAIISEE 624 G + LFK A++ KR +ET I ELA K A +L+IGAGKMG L ++L G K+ VVNR+ E+ + ++ G KPL E+ +AD+V +ST ++ + K+ V P+E G LF +DI+VPR++ +AD+ET +Y++DDL++VVAAN +R + A + +I E Sbjct: 135 GTIFNHLFKQAVTFAKRAHSETGIGAHAVSVSYAAVELA--KKIFGRLAGKHVLIIGAGKMGTLAAQNLYGSGVGKVTVVNRTLEKAKQLAKQFAGEA---KPLGELSCALLEADIVISSTGAKGYILTKEMVA---PLEKMRKGRPLFMVDIAVPRDLDPALADLETVFLYDIDDLQDVVAANLAERQKAAARIETMIEAE 328
BLAST of FC930965 vs. ExPASy Swiss-Prot
Match: HEM1_SYNR3 (Glutamyl-tRNA reductase OS=Synechococcus sp. (strain RCC307) GN=hemA PE=3 SV=1) HSP 1 Score: 105.916 bits (263), Expect = 8.071e-23 Identity = 68/216 (31.48%), Postives = 113/216 (52.31%), Query Frame = 1 Query: 1 GQGVVGFGRNISGLFKHAISVGKRVRTETNIXXXXXXXXXXXXELALMKLPES-------SHATARMLVIGAGKMGKLVIKHLVAKGCTKMVVVNRSEERVAAIREELNGVEIIYKPLSEMLSCAADADVVFTSTASEAPLFLKDHVQDLPPVEAAVGGLRLF-IDISVPRNVGSCVADVETARVYNVDDLKEVVAANKEDRLRKAMEAQAIISEE 624 GQ G ++ L A+S GKRVR+ETN+ ELA +K+ + S + ++ V+GAG+M +L+++HL +KG + VVNR+ + + ++ + I L ++ + A ++FTST ++ P+ D ++A RL +DI VPRN+ S ADV Y+VDDL+EVV N R + A +A+ ++ E+ Sbjct: 128 GQDHKSIGPILNRLLNQAVSTGKRVRSETNLGSGAVSISSAAVELAQLKVGQEQGVDDLVSLSQEKVAVVGAGRMARLLLQHLQSKGARSITVVNRTVAKAEVLAKDFPDLVITCCGLDQLDAQLASNTLLFTSTGADEPII------DRQRLDAITRQARLMLVDIGVPRNISSDAADVSGTLSYDVDDLQEVVERNVAARQQLAQQAEVLLDED 337 HSP 2 Score: 22.3274 bits (46), Expect = 8.071e-23 Identity = 9/14 (64.29%), Postives = 9/14 (64.29%), Query Frame = 3 Query: 633 FAAWRDSLETVPTI 674 F W D LE VPTI Sbjct: 341 FLDWWDGLEAVPTI 354
BLAST of FC930965 vs. ExPASy Swiss-Prot
Match: HEM1_SHEON (Glutamyl-tRNA reductase OS=Shewanella oneidensis GN=hemA PE=3 SV=1) HSP 1 Score: 107.071 bits (266), Expect = 9.459e-23 Identity = 73/200 (36.50%), Postives = 107/200 (53.50%), Query Frame = 1 Query: 31 ISGLFKHAISVGKRVRTETNIXXXXXXXXXXXXELALMKLPESSHATARMLVIGAGKMGKLVIKHLVAKGCTKMVVVNRSEERVAAIREELNGVEIIYKPLSEMLSCAADADVVFTSTASEAPLFLKDHVQDLPPVEAAVGGLRLFIDISVPRNVGSCVADVETARVYNVDDLKEVVAANKEDRLRKAMEAQAIISEESN 630 I LF++ SV K+VRTET I +A K SS +T ++L+IGAG+ +LV KHL G MVV NR+ ER ++ EE N I + + L AD+V +STAS P+ K V+ ++ L +DI+VPR++ VAD++ A +Y VDDL ++ NK R A +A+ I E+S+ Sbjct: 134 IDRLFQNTFSVAKKVRTETEIGAAAVSVAFAAVSMA--KHIFSSLSTTKVLLIGAGETIELVAKHLKDNGVASMVVANRTLERAQSMCEEFNATAITLAQIPDFLP---KADIVISSTASPLPILGKGMVEKA--LKQRRHQPMLLVDIAVPRDIEPEVADLDDAFLYTVDDLHSIIEQNKASRKEAAEQAELITEEQSH 326
BLAST of FC930965 vs. ExPASy Swiss-Prot
Match: HEM1_NATTJ (Glutamyl-tRNA reductase OS=Natranaerobius thermophilus (strain ATCC BAA-1301 / DSM 18059 / JW/NM-WN-LF) GN=hemA PE=3 SV=1) HSP 1 Score: 107.071 bits (266), Expect = 9.459e-23 Identity = 70/196 (35.71%), Postives = 104/196 (53.06%), Query Frame = 1 Query: 37 GLFKHAISVGKRVRTETNIXXXXXXXXXXXXELALMKLPESSHATARMLVIGAGKMGKLVIKHLVAKGCTKMVVVNRSEERVAAIREELNGVEIIYKPLSEMLSCAADADVVFTSTASEAPLFLKDHVQDLPPVEAAVGGLRLFIDISVPRNVGSCVADVETARVYNVDDLKEVVAANKEDRLRKAMEAQAIISEE 624 GL++ A+ GKRV ET I ELA S R L+IGAGKM +L +HL + G ++V+NR+ ER + ++ G+ Y LSE L+ + D+V TST AP F+ Q +++ IDI+VPR+V V + + A +Y +DDL+ VV +N ++R +A A+ IISEE Sbjct: 142 GLYQQALRTGKRVHRETGINDNAASVSYASVELATKIF--GSLQNRRALIIGAGKMSELAARHLYSNGVKDVIVINRTIERAKNLADKFGGLYASYDQLSEWLN---EIDIVITSTG--APHFVIKEEQIKRAMKSRKYSPMFLIDIAVPRDVEPSVNNQDNAYLYTIDDLEAVVESNMQERQEEARNAELIISEE 330
BLAST of FC930965 vs. ExPASy Swiss-Prot
Match: HEM1_SHESR (Glutamyl-tRNA reductase OS=Shewanella sp. (strain MR-7) GN=hemA PE=3 SV=1) HSP 1 Score: 106.686 bits (265), Expect = 1.235e-22 Identity = 73/199 (36.68%), Postives = 106/199 (53.27%), Query Frame = 1 Query: 31 ISGLFKHAISVGKRVRTETNIXXXXXXXXXXXXELALMKLPESSHATARMLVIGAGKMGKLVIKHLVAKGCTKMVVVNRSEERVAAIREELNGVEIIYKPLSEMLSCAADADVVFTSTASEAPLFLKDHVQDLPPVEAAVGGLRLFIDISVPRNVGSCVADVETARVYNVDDLKEVVAANKEDRLRKAMEAQAIISEES 627 I LF++ SV K+VRTET I +A K SS +T ++L+IGAG+ +LV KHL G MVV NR+ ER ++ EE N I + + L AD+V +STAS P+ K V+ ++ L +DI+VPR++ VAD++ A +Y VDDL ++ NK R A +A+ I E+S Sbjct: 134 IDRLFQNTFSVAKKVRTETEIGAAAVSVAFAAVSMA--KHIFSSLSTTKVLLIGAGETIELVAKHLKDNGVASMVVANRTLERAQSMCEEFNATAITLAQIPDFLP---KADIVISSTASPLPILGKGMVEKA--LKQRRHQPMLLVDIAVPRDIEPEVADLDDAFLYTVDDLHSIIEQNKASRKEAAEQAELITEEQS 325
BLAST of FC930965 vs. ExPASy Swiss-Prot
Match: HEM1_SHESA (Glutamyl-tRNA reductase OS=Shewanella sp. (strain ANA-3) GN=hemA PE=3 SV=1) HSP 1 Score: 106.686 bits (265), Expect = 1.235e-22 Identity = 73/199 (36.68%), Postives = 106/199 (53.27%), Query Frame = 1 Query: 31 ISGLFKHAISVGKRVRTETNIXXXXXXXXXXXXELALMKLPESSHATARMLVIGAGKMGKLVIKHLVAKGCTKMVVVNRSEERVAAIREELNGVEIIYKPLSEMLSCAADADVVFTSTASEAPLFLKDHVQDLPPVEAAVGGLRLFIDISVPRNVGSCVADVETARVYNVDDLKEVVAANKEDRLRKAMEAQAIISEES 627 I LF++ SV K+VRTET I +A K SS +T ++L+IGAG+ +LV KHL G MVV NR+ ER ++ EE N I + + L AD+V +STAS P+ K V+ ++ L +DI+VPR++ VAD++ A +Y VDDL ++ NK R A +A+ I E+S Sbjct: 134 IDRLFQNTFSVAKKVRTETEIGAAAVSVAFAAVSMA--KHIFSSLSTTKVLLIGAGETIELVAKHLKDNGVASMVVANRTLERAQSMCEEFNATAITLAQIPDFLP---KADIVISSTASPLPILGKGMVEKA--LKQRRHQPMLLVDIAVPRDIEPEVADLDDAFLYTVDDLHSIIEQNKASRKEAAEQAELITEEQS 325
BLAST of FC930965 vs. ExPASy Swiss-Prot
Match: HEM1_SHESM (Glutamyl-tRNA reductase OS=Shewanella sp. (strain MR-4) GN=hemA PE=3 SV=1) HSP 1 Score: 106.301 bits (264), Expect = 1.613e-22 Identity = 72/200 (36.00%), Postives = 107/200 (53.50%), Query Frame = 1 Query: 31 ISGLFKHAISVGKRVRTETNIXXXXXXXXXXXXELALMKLPESSHATARMLVIGAGKMGKLVIKHLVAKGCTKMVVVNRSEERVAAIREELNGVEIIYKPLSEMLSCAADADVVFTSTASEAPLFLKDHVQDLPPVEAAVGGLRLFIDISVPRNVGSCVADVETARVYNVDDLKEVVAANKEDRLRKAMEAQAIISEESN 630 I +F++ SV K+VRTET I +A K SS +T ++L+IGAG+ +LV KHL G MVV NR+ ER ++ EE N I + + L AD+V +STAS P+ K V+ ++ L +DI+VPR++ VAD++ A +Y VDDL ++ NK R A +A+ I E+S+ Sbjct: 134 IDRMFQNTFSVAKKVRTETEIGAAAVSVAFAAVSMA--KHIFSSLSTTKVLLIGAGETIELVAKHLKDNGVASMVVANRTLERAQSMCEEFNATAITLAQIPDFLP---KADIVISSTASPLPILGKGMVEKA--LKQRRHQPMLLVDIAVPRDIEPEVADLDDAFLYTVDDLHSIIEQNKASRKEAAEQAELITEEQSH 326
BLAST of FC930965 vs. ExPASy Swiss-Prot
Match: HEM1_DESVM (Glutamyl-tRNA reductase OS=Desulfovibrio vulgaris (strain Miyazaki F / DSM 19637) GN=hemA PE=3 SV=3) HSP 1 Score: 105.916 bits (263), Expect = 2.107e-22 Identity = 68/209 (32.54%), Postives = 113/209 (54.07%), Query Frame = 1 Query: 22 GRN-----ISGLFKHAISVGKRVRTETNIXXXXXXXXXXXXELALMKLPESSHATARMLVIGAGKMGKLVIKHLVAKGCTKMVVVNRSEERVAAIREELNGVEIIYKPLSEMLSCAADADVVFTSTASEAPLFLKDHVQDLPPVEAAVGGLRLFIDISVPRNVGSCVADVETARVYNVDDLKEVVAANKEDRLRKAMEAQAIISEESNS 633 GRN ++ L A SV KRVRTET + ELA E S A ++IGAG+M +L HL+ G +++V NR+ ER + + G ++++ LS L A+AD++ +ST + P+ ++D+ ++ FIDI+VPR++ V +++ +Y++DDLKEVV N R +A +A++I+ EE+ + Sbjct: 130 GRNATRVVLNRLLHKAFSVAKRVRTETGVASSAVSISYAAVELAKRIFGEMSQYKA--MLIGAGEMAELAATHLLNSGIREIMVANRTFERGLQLARQFKGEAVLFQDLSVRL---AEADIIISSTGAHEPIIRARDIKDV--LKRRKNRPMFFIDIAVPRDIDPDVNNLDNVYLYDIDDLKEVVEENMAQRRDEAAKARSIVEEEAGN 331
BLAST of FC930965 vs. ExPASy Swiss-Prot
Match: HEM1_DESHY (Glutamyl-tRNA reductase OS=Desulfitobacterium hafniense (strain Y51) GN=hemA PE=3 SV=1) HSP 1 Score: 104.375 bits (259), Expect = 3.915e-22 Identity = 67/198 (33.84%), Postives = 113/198 (57.07%), Query Frame = 1 Query: 31 ISGLFKHAISVGKRVRTETNIXXXXXXXXXXXXELALMKLPESSHATARMLVIGAGKMGKLVIKHLVAKGCTKMVVVNRSEERVAAIREELNGVEIIYKPLSEMLSCAADADVVFTSTASEAPLFLKDHVQDLPPVEAAVGGLRLFIDISVPRNVGSCVADVETARVYNVDDLKEVVAANKEDRLRKAMEAQAIISEE 624 I +F++A++VGKRVR+ET I ELA + + +L++GAG+M L KHLVA G ++V NRS +R A+ EE +G I Y+ L L A+AD+V ++TA+ + + ++ + +E L IDI+VPR++ V ++E ++++DDL+ VV ++++ R A++A I+ EE Sbjct: 138 IHAIFQNALAVGKRVRSETQIDQHPTSVSYTAVELAKQTFGDVQGKS--ILILGAGEMSALTAKHLVASGADTVLVSNRSMQRAQALAEEFSGRAIPYEELDTAL---AEADIVISATAAAHFVIKPERMRRV--MEQRRQRALLLIDIAVPRDIHPNVGELEGVTLFDIDDLRGVVDSHQKAREEAALQAGRILEEE 328 HSP 2 Score: 21.557 bits (44), Expect = 3.915e-22 Identity = 8/15 (53.33%), Postives = 10/15 (66.67%), Query Frame = 3 Query: 630 QFAAWRDSLETVPTI 674 +F W +SL VPTI Sbjct: 331 RFVKWHNSLYVVPTI 345 The following BLAST results are available for this feature:
BLAST of FC930965 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 465
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >FC930965 ID=FC930965; Name=FC930965; organism=Citrus clementina; type=EST; length=694bpback to top |