FC930965
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC930965 vs. ExPASy Swiss-Prot
Match: HEM1_DESHD (Glutamyl-tRNA reductase OS=Desulfitobacterium hafniense (strain DCB-2 / DSM 10664) GN=hemA PE=3 SV=1) HSP 1 Score: 104.375 bits (259), Expect = 3.915e-22 Identity = 67/198 (33.84%), Postives = 113/198 (57.07%), Query Frame = 1 Query: 31 ISGLFKHAISVGKRVRTETNIXXXXXXXXXXXXELALMKLPESSHATARMLVIGAGKMGKLVIKHLVAKGCTKMVVVNRSEERVAAIREELNGVEIIYKPLSEMLSCAADADVVFTSTASEAPLFLKDHVQDLPPVEAAVGGLRLFIDISVPRNVGSCVADVETARVYNVDDLKEVVAANKEDRLRKAMEAQAIISEE 624 I +F++A++VGKRVR+ET I ELA + + +L++GAG+M L KHLVA G ++V NRS +R A+ EE +G I Y+ L L A+AD+V ++TA+ + + ++ + +E L IDI+VPR++ V ++E ++++DDL+ VV ++++ R A++A I+ EE Sbjct: 138 IHAIFQNALAVGKRVRSETQIDQHPTSVSYTAVELAKQTFGDVQGKS--ILILGAGEMSALTAKHLVASGADTVLVSNRSMQRAQALAEEFSGRAIPYEELDTAL---AEADIVISATAAAHFVIKPERMRRV--MEQRRQRALLLIDIAVPRDIHPNVGELEGVTLFDIDDLRGVVDSHQKAREEAALQAGRILEEE 328 HSP 2 Score: 21.557 bits (44), Expect = 3.915e-22 Identity = 8/15 (53.33%), Postives = 10/15 (66.67%), Query Frame = 3 Query: 630 QFAAWRDSLETVPTI 674 +F W +SL VPTI Sbjct: 331 RFVKWHNSLYVVPTI 345
BLAST of FC930965 vs. ExPASy Swiss-Prot
Match: HEM1_MOOTA (Glutamyl-tRNA reductase OS=Moorella thermoacetica (strain ATCC 39073) GN=hemA PE=3 SV=1) HSP 1 Score: 104.375 bits (259), Expect = 6.131e-22 Identity = 69/201 (34.33%), Postives = 107/201 (53.23%), Query Frame = 1 Query: 31 ISGLFKHAISVGKRVRTETNIXXXXXXXXXXXXELALMKLPESSHATARMLVIGAGKMGKLVIKHLVAKGCTKMVVVNRSEERVAAIREELNGVEIIYKPLSEMLSCAADADVVFTSTASEAPLFLKDHVQDLPPVEAAVGGLRLFIDISVPRNVGSCVADVETARVYNVDDLKEVVAANKEDRLRKAMEAQAIISEESNS 633 ++ L++ AI GKRVRTET I ELA + +LVIGAGKM L ++L KG T ++V NRS +R A+ + G + L + L AD+V + TA+ + +D V V A G + IDI+VPR++ D+ ++Y++DDL++VV AN E+R + A +A+ II+ E+ + Sbjct: 138 LNTLWQQAIYAGKRVRTETRIDANTVSVSYAAVELARQVFHDELDGRT-VLVIGAGKMSTLAARYLKDKGVTTVLVSNRSYDRAVALAATIGGQAVRLDALEDYLP---RADIVISCTAASHYILHRDQVARA--VAARPGVPLMLIDIAVPRDIEPAAGDLPGVKLYDIDDLQQVVLANLEERKKAARQAEGIIAAEAEA 332
BLAST of FC930965 vs. ExPASy Swiss-Prot
Match: HEM1_HELMO (Glutamyl-tRNA reductase OS=Heliobacillus mobilis GN=hemA PE=3 SV=1) HSP 1 Score: 104.375 bits (259), Expect = 6.131e-22 Identity = 68/196 (34.69%), Postives = 105/196 (53.57%), Query Frame = 1 Query: 43 FKHAISVGKRVRTETNIXXXXXXXXXXXXELALMKLPESSHATARMLVIGAGKMGKLVIKHLVAKGCTKMVVVNRSEERVAAIREELNGVEIIYKPLSEMLSCAADADVVFTSTASEAPLFLKDHVQDLPPVEAAVGGLRLFIDISVPRNVGSCVADVETARVYNVDDLKEVVAANKEDRLRKAMEAQAIISEESN 630 F+ AI+VGKRVRTET I ELA L TA +V+GAGKM L +KHLVA+G K+++ NRS E+ + + G I + ++ L +AD++ + TA+ + K V+ + ++ G F DI+VPR++ VA V +Y++D ++ V+ N +R + A EA+ II E N Sbjct: 142 FQQAITVGKRVRTETGIDQHPVSISYTAVELAEQVLGGLKGRTA--MVLGAGKMSVLTLKHLVAEGVDKIIIANRSVEKAEELAKSCGGEAISFADVNHRLE---EADILISCTAATHYVIRKSMVEQV--MDRRGGKPVFFFDIAVPRDIDPEVAQVPGTHLYDIDAMQHVIDRNLAERRKCAAEAEIIIEHEIN 330
BLAST of FC930965 vs. ExPASy Swiss-Prot
Match: HEM1_GEOUR (Glutamyl-tRNA reductase OS=Geobacter uraniireducens (strain Rf4) GN=hemA PE=3 SV=1) HSP 1 Score: 101.679 bits (252), Expect = 8.625e-22 Identity = 69/191 (36.13%), Postives = 103/191 (53.93%), Query Frame = 1 Query: 52 AISVGKRVRTETNIXXXXXXXXXXXXELALMKLPESSHATARMLVIGAGKMGKLVIKHLVAKGCTKMVVVNRSEERVAAIREELNGVEIIYKPLSEMLSCAADADVVFTSTASEAPLFLKDHVQDLPPVEAAVGGLRLFIDISVPRNVGSCVADVETARVYNVDDLKEVVAANKEDRLRKAMEAQAIISEE 624 A SV KRVRTET I ELA + S T +++IGAG+M +L KH + G ++V NR+ ER + EE +G + Y+ L + L AD+V +ST + + +V+++ + FIDI+VPR++ V DVE +Y VDDL VVA N E R ++A +A+AI+ +E Sbjct: 145 AFSVAKRVRTETKIASSAVSVAFAAVELAKKIFGDLSDKT--VMLIGAGEMCELAAKHFINTGVRGVMVTNRTFERAVKLAEEFDGKAVNYEELFDHLH---KADIVLSSTGAPHFIIGPKNVEEV--IRRRKMKPMFFIDIAVPRDIDPKVNDVENIYLYTVDDLNGVVATNLEQRNKEAEKAEAIVEQE 328 HSP 2 Score: 23.0978 bits (48), Expect = 8.625e-22 Identity = 10/17 (58.82%), Postives = 10/17 (58.82%), Query Frame = 3 Query: 624 IKQFAAWRDSLETVPTI 674 I QF W SLE PTI Sbjct: 329 IGQFFKWLSSLEVTPTI 345
BLAST of FC930965 vs. ExPASy Swiss-Prot
Match: HEM1_GEOSM (Glutamyl-tRNA reductase OS=Geobacter sp. (strain M21) GN=hemA PE=3 SV=1) HSP 1 Score: 101.679 bits (252), Expect = 8.625e-22 Identity = 74/192 (38.54%), Postives = 102/192 (53.12%), Query Frame = 1 Query: 52 AISVGKRVRTETNIXXXXXXXXXXXXELALMKLPESSHATARMLVIGAGKMGKLVIKHLVAKGCTKMVVVNRSEERVAAIREELNGVEIIYKPLSEMLSCAADADVVFTSTASEAPLFLKDHVQDLPPV-EAAVGGLRLFIDISVPRNVGSCVADVETARVYNVDDLKEVVAANKEDRLRKAMEAQAIISEE 624 A SV KRVRTET I ELA E S T +L+IGAG+M +L KH + G ++V NR+ ER + EE + + ++ L E L AD++ +ST AP F+ H +D+ V FIDI+VPR++ V DVE +Y VDDL VVA N E R +A +A+AI+ +E Sbjct: 145 AFSVAKRVRTETKIASSAVSVAFAAVELAKKIFGELSDKT--VLLIGAGEMCELAAKHFINVGVRGVMVTNRTYERAEKLAEEFDAKPVHFEALMETLP---KADIILSSTG--APHFII-HEKDMEDVLRRRKHKPMFFIDIAVPRDIDPKVNDVENCYLYTVDDLNGVVATNLEQRKVEAAKAEAIVEQE 328 HSP 2 Score: 23.0978 bits (48), Expect = 8.625e-22 Identity = 10/17 (58.82%), Postives = 10/17 (58.82%), Query Frame = 3 Query: 624 IKQFAAWRDSLETVPTI 674 I QF W SLE PTI Sbjct: 329 IGQFFKWLSSLEVTPTI 345
BLAST of FC930965 vs. ExPASy Swiss-Prot
Match: HEM1_GEOSF (Glutamyl-tRNA reductase OS=Geobacter sp. (strain FRC-32) GN=hemA PE=3 SV=1) HSP 1 Score: 101.679 bits (252), Expect = 8.625e-22 Identity = 66/191 (34.55%), Postives = 102/191 (53.40%), Query Frame = 1 Query: 52 AISVGKRVRTETNIXXXXXXXXXXXXELALMKLPESSHATARMLVIGAGKMGKLVIKHLVAKGCTKMVVVNRSEERVAAIREELNGVEIIYKPLSEMLSCAADADVVFTSTASEAPLFLKDHVQDLPPVEAAVGGLRLFIDISVPRNVGSCVADVETARVYNVDDLKEVVAANKEDRLRKAMEAQAIISEE 624 A SV KRVRTET I ELA + S T +++IGAG+M +L KH + G ++V NR+ ER + EE +G + Y+ L + L AD++ +ST + + ++D+ + FIDI+VPR++ V D+E +Y VDDL VVA N E R +++ +A+AI+ +E Sbjct: 145 AFSVAKRVRTETKIASSAVSVAFAAVELAKKIFGDLSDKT--VMLIGAGEMCELAAKHFINTGVRGVMVTNRTFERAVKLAEEFDGKAVNYEDLFDQLH---KADIILSSTGAPHFIIKPKDIEDV--IRRRKLKPMFFIDIAVPRDIDPKVNDIENIYLYTVDDLNGVVATNLEQRKKESEKAEAIVEQE 328 HSP 2 Score: 23.0978 bits (48), Expect = 8.625e-22 Identity = 10/17 (58.82%), Postives = 10/17 (58.82%), Query Frame = 3 Query: 624 IKQFAAWRDSLETVPTI 674 I QF W SLE PTI Sbjct: 329 IGQFFKWLSSLEVTPTI 345
BLAST of FC930965 vs. ExPASy Swiss-Prot
Match: HEM1_BACC3 (Glutamyl-tRNA reductase OS=Bacillus cereus (strain 03BB102) GN=hemA PE=3 SV=1) HSP 1 Score: 102.834 bits (255), Expect = 1.784e-21 Identity = 67/208 (32.21%), Postives = 112/208 (53.85%), Query Frame = 1 Query: 4 QGVVGFGRNISGLFKHAISVGKRVRTETNIXXXXXXXXXXXXELALMKLPESSHATARMLVIGAGKMGKLVIKHLVAKGCTKMVVVNRSEERVAAIREELNGVEIIYKPLSEMLSCAADADVVFTSTASEAPLFLKDHVQDLPPVEAAVGGLRLF-IDISVPRNVGSCVADVETARVYNVDDLKEVVAANKEDRLRKAMEAQAIISEE 624 Q V G + LFK I++ KR +ET I EL E + +L++GAGKMG+L +++L G K+ V+NR+ + + E+ G KPLSE+ +AD++ +ST + + K+ + VE G LF +DI+VPR++ + ++E + +Y++DDL+ VV AN+ +RL++A + Q +I EE Sbjct: 129 QQVKATGTIFNELFKQVITLAKRAHSETTIGESAMSVSYAAVELGKKIFGELTDC--HVLILGAGKMGELALQNLYGSGARKVTVMNRTLSKAEVMAEKYMGHA---KPLSELQCALLEADILISSTGASDYVITKEM---MTKVEKMRSGRPLFMVDIAVPRDIDPAIDELEGSFLYDIDDLQGVVEANRAERLKEAEKIQFMIEEE 328
BLAST of FC930965 vs. ExPASy Swiss-Prot
Match: HEM1_SORC5 (Glutamyl-tRNA reductase OS=Sorangium cellulosum (strain So ce56) GN=hemA PE=3 SV=1) HSP 1 Score: 102.449 bits (254), Expect = 2.330e-21 Identity = 71/212 (33.49%), Postives = 113/212 (53.30%), Query Frame = 1 Query: 4 QGVVGFGRNISGLFKHAISVGKRVRTETNIXXXXXXXXXXXXELALMKLPESSHATARMLVIGAGKMGKLVIKHLVAKGCTKMVVVNRSEERVAAIREELNGVEIIYKPLSEMLSCAADADVVFTSTASEAPLFLKDHVQDLPPVEAAVGGLRLFIDISVPRNVGSCVADVETARVYNVDDLKEVVAANKEDRLRKAMEAQAIISEESNSLQ 639 +G G + AI VGKRVRTET I +LA + + TA L+IGAG M + K LV G +++VVNRS +R AA+ E+ G +P +++ DAD+V +ST+S + D V+ +A G IDI+VPR++ V +++ +Y+VDDL ++VA + E R +A A+AI+++E+ + + Sbjct: 145 RGAKTLGVRLGRAAHRAIKVGKRVRTETAIGAGQVSVSSVAIDLARQIFADLAGHTA--LLIGAGDMAEAASKLLVRAGA-RLIVVNRSPDRAAALAREVGGEP---RPWADLERSVIDADIVISSTSSPNYVVTPDLVRRAR--KARKGRSLFLIDIAVPRDIDPAVNKLDSVYLYDVDDLSQIVAESVEGRAAEAARAEAIVADEAQAFE 348
BLAST of FC930965 vs. ExPASy Swiss-Prot
Match: HEM1_SALTY (Glutamyl-tRNA reductase OS=Salmonella typhimurium GN=hemA PE=3 SV=1) HSP 1 Score: 102.449 bits (254), Expect = 2.330e-21 Identity = 67/197 (34.01%), Postives = 112/197 (56.85%), Query Frame = 1 Query: 40 LFKHAISVGKRVRTETNIXXXXXXXXXXXXELALMKLPESSHATARMLVIGAGKMGKLVIKHLVAKGCTKMVVVNRSEERVAAIREELNGVEIIYKPLSEMLSCAADADVVFTSTASEAPLFLKDHVQDLPPVEAAVGGLRLFIDISVPRNVGSCVADVETARVYNVDDLKEVVAANKEDRLRKAMEAQAIISEESN 630 +F+ + SV KRVRTET+I LA S +T +L++GAG+ +LV +HL KM++ NR+ ER A+ +E+ G E+I LS++ + DAD++ +STAS P+ K V+ +++ L +DI+VPR+V V + A +Y+VDDL+ +++ N R A+EA+ I+ +E++ Sbjct: 141 MFQKSFSVAKRVRTETDIGASAVSVAFAACTLARQIF--ESLSTVTVLLVGAGETIELVARHLREHKVQKMIIANRTRERAQALADEV-GAEVI--SLSDIDARLQDADIIISSTASPLPIIGKGMVERA--LKSRRNQPMLLVDIAVPRDVEPEVGKLANAYLYSVDDLQSIISHNLAQRQAAAVEAETIVEQEAS 330
BLAST of FC930965 vs. ExPASy Swiss-Prot
Match: HEM1_SALTI (Glutamyl-tRNA reductase OS=Salmonella typhi GN=hemA PE=3 SV=1) HSP 1 Score: 102.449 bits (254), Expect = 2.330e-21 Identity = 67/197 (34.01%), Postives = 112/197 (56.85%), Query Frame = 1 Query: 40 LFKHAISVGKRVRTETNIXXXXXXXXXXXXELALMKLPESSHATARMLVIGAGKMGKLVIKHLVAKGCTKMVVVNRSEERVAAIREELNGVEIIYKPLSEMLSCAADADVVFTSTASEAPLFLKDHVQDLPPVEAAVGGLRLFIDISVPRNVGSCVADVETARVYNVDDLKEVVAANKEDRLRKAMEAQAIISEESN 630 +F+ + SV KRVRTET+I LA S +T +L++GAG+ +LV +HL KM++ NR+ ER A+ +E+ G E+I LS++ + DAD++ +STAS P+ K V+ +++ L +DI+VPR+V V + A +Y+VDDL+ +++ N R A+EA+ I+ +E++ Sbjct: 141 MFQKSFSVAKRVRTETDIGASAVSVAFAACTLARQIF--ESLSTVTVLLVGAGETIELVARHLREHKVQKMIIANRTRERAQALADEV-GAEVI--SLSDIDARLQDADIIISSTASPLPIIGKGMVERA--LKSRRNQPMLLVDIAVPRDVEPEVGKLANAYLYSVDDLQSIISHNLAQRQAAAVEAETIVEQEAS 330 The following BLAST results are available for this feature:
BLAST of FC930965 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 465
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Sequences
The
following sequences are available for this feature:
EST sequence >FC930965 ID=FC930965; Name=FC930965; organism=Citrus clementina; type=EST; length=694bpback to top |