FC930966
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC930966 vs. ExPASy Swiss-Prot
Match: MKRN2_HUMAN (Probable E3 ubiquitin-protein ligase makorin-2 OS=Homo sapiens GN=MKRN2 PE=1 SV=2) HSP 1 Score: 95.9005 bits (237), Expect = 2.273e-19 Identity = 61/205 (29.76%), Postives = 89/205 (43.41%), Query Frame = 2 Query: 209 SKRVLCKFFAHGACLKGEHCEFSHDWKDP-PNNICTYYQKGFCSYGSRCRYEHVKP---------XXXXXXXXXXXXXXXXXXXXXXGITKVPGVMP-------------ELSALSRPFLPPNKTAWNPESVCNDSLENDEVDEPRNLKPADRS----------------ICSFAAAGNCPRGEKCPHIHGDTCPTCGKACLHPF 706 +K++ C++F HG C +G C FSHD + P+ IC YYQKG+C+YG+RCRY+H +P I K P LS ++ P+ + NP S C+D + E+ +P + A RS +C +AAAG C G+ C ++HG+ C C LHPF Sbjct: 3 TKQITCRYFMHGVCREGSQCLFSHDLANSKPSTICKYYQKGYCAYGTRCRYDHTRPSAAAGGAVGTMAHSVPSPAFHSPHPPSEVTASIVKTNSHEPGKREKRTLVLRDRNLSGMAERKTQPSMVS-NPGS-CSDPQPSPEM-KPHSYLDAIRSGLDDVEASSSYSNEQQLCPYAAAGECRFGDACVYLHGEVCEICRLQVLHPF 204
BLAST of FC930966 vs. ExPASy Swiss-Prot
Match: MKRN2_SERQU (Probable E3 ubiquitin-protein ligase makorin-2 OS=Seriola quinqueradiata GN=mkrn2 PE=2 SV=1) HSP 1 Score: 94.7449 bits (234), Expect = 5.064e-19 Identity = 59/202 (29.21%), Postives = 84/202 (41.58%), Query Frame = 2 Query: 209 SKRVLCKFFAHGACLKGEHCEFSHDWKDP-PNNICTYYQKGFCSYGSRCRYEHVKPXXXXXXXXXXXXXXXXXXXXXXGI--------TKVPGVMPE----------LSALSRPFLPPNKTAWNPESVCN-------------DSLENDEVDEP-----RNLKPADRSICSFAAAGNCPRGEKCPHIHGDTCPTCGKACLHP 703 +K+V C++F HG C +G C FSHD + P+ IC +YQ+G C+YG RCRY+H+KP G V G M + + + R F P + W+ S D+ D+ P +NL +C +AA G+C E C ++HGD C CG LHP Sbjct: 3 TKQVTCRYFLHGVCREGSRCLFSHDLNNSKPSTICKFYQRGVCAYGERCRYDHIKPSSRGGGGGAPEDQAGGGGAGGGGAGIGGAGGGPSVRGGMKKNLVLRDRVLGVDRVDRMFGAPADSMWSDVSTAAAPHSYVEAIRTGLDASAQDQATPPVCGPSQNLP----QLCPYAANGHCFYEENCTYLHGDLCEVCGLQVLHP 200
BLAST of FC930966 vs. ExPASy Swiss-Prot
Match: MKRN1_TAKRU (Probable E3 ubiquitin-protein ligase makorin-1 OS=Takifugu rubripes GN=mkrn1 PE=2 SV=1) HSP 1 Score: 93.9745 bits (232), Expect = 8.638e-19 Identity = 55/185 (29.73%), Postives = 79/185 (42.70%), Query Frame = 2 Query: 209 SKRVLCKFFAHGACLKGEHCEFSHDWKD--PPNNICTYYQKGFCSYGSRCRYEHVKPXXXXXXXXXXXXXXXXXXXXXXGITKVPGVMPELS-----------ALSRPFLPPNKTAWNPESV-------CNDSLENDEVDEPRNLKPADRSICSFAAAGNCPRGEKCPHIHGDTCPTCGKACLHP 703 +K V C++F HG C +G++C +SHD P +C ++QKG C +G RCR+EH KP + P + PE S A + F+P ESV + L D + L+ + +C +AA G C G C ++HGD C CG LHP Sbjct: 19 TKHVTCRYFMHGLCKEGDNCRYSHDLTSSKPAAMMCKFFQKGNCVFGERCRFEHCKPTKSEEVSNPQMLLLS---------STPPPIDPECSESGPRLKTQDWANAAEFVPGQPYCGRAESVDVEISIPLIEELNGDATTDKEELR---KQLCPYAAVGECRYGVNCAYLHGDVCDMCGLQVLHP 191
BLAST of FC930966 vs. ExPASy Swiss-Prot
Match: MKRN1_DANRE (Probable E3 ubiquitin-protein ligase makorin-1 OS=Danio rerio GN=mkrn1 PE=2 SV=1) HSP 1 Score: 92.8189 bits (229), Expect = 1.924e-18 Identity = 54/183 (29.51%), Postives = 78/183 (42.62%), Query Frame = 2 Query: 209 SKRVLCKFFAHGACLKGEHCEFSHDWKDPPNN-ICTYYQKGFCSYGSRCRYEHVKP---------XXXXXXXXXXXXXXXXXXXXXXGITKVPGVMPELSAL-----SRPFLPPNKTAWNPESVCNDS---LENDEVDEPRNLKPADRSICSFAAAGNCPRGEKCPHIHGDTCPTCGKACLHP 703 +K V C++F HG C +GE+C +SHD IC ++QKG C++G RCRYEH KP G T P+ S + F+P + V + L +E ++ + K + +C +AA G C G C ++HGD C CG LHP Sbjct: 19 TKHVTCRYFMHGLCKEGENCRYSHDLSSCKQTMICKFFQKGCCAFGDRCRYEHTKPSKQDEVPSSKPSMPLTAAPLAGTPEPVSDGPGGTTGAQEKPQGSGAVDWVNAAEFVPGQPYCGRADPVLCEGPGPLIEEEYEKEQANKEMKKQLCPYAAVGECRYGLNCAYLHGDVCDMCGLQVLHP 201
BLAST of FC930966 vs. ExPASy Swiss-Prot
Match: MKRN2_TAKRU (Probable E3 ubiquitin-protein ligase makorin-2 OS=Takifugu rubripes GN=mkrn2 PE=2 SV=1) HSP 1 Score: 89.3521 bits (220), Expect = 2.127e-17 Identity = 52/178 (29.21%), Postives = 79/178 (44.38%), Query Frame = 2 Query: 209 SKRVLCKFFAHGACLKGEHCEFSHD-WKDPPNNICTYYQKGFCSYGSRCRYEHVK-PXXXXXXXXXXXXXXXXXXXXXXGITKVPGVMPELSALSR--------PFLPPNKTAWNPESVCNDSLENDEVDEPRNLKPADRSI---CSFAAAGNCPRGEKCPHIHGDTCPTCGKACLHP 703 +K+V C++F HG C +G HC+FSHD P+ IC +YQ+G C+YG RCRY+HVK G K V E + R + P + +++ + + P + ++ + C +AA G+C E C ++HGD C CG L P Sbjct: 3 TKQVTCRYFLHGVCREGNHCQFSHDPSSSKPSTICKFYQRGTCAYGERCRYDHVKLSSRGGGAFDMAGVGGARDGASTRGAAKKTFVHQERENMFRAPAESFGADVMAPAPHTY-VDAIRTGLSSSSQDHTPPTMAGVNQDLPRLCPYAAVGHCYYEENCIYLHGDKCEVCGLQVLDP 179
BLAST of FC930966 vs. ExPASy Swiss-Prot
Match: MKRN2_XENTR (Probable E3 ubiquitin-protein ligase makorin-2 OS=Xenopus tropicalis GN=mkrn2 PE=2 SV=1) HSP 1 Score: 75.0998 bits (183), Expect = 4.152e-13 Identity = 29/56 (51.79%), Postives = 40/56 (71.43%), Query Frame = 2 Query: 209 SKRVLCKFFAHGACLKGEHCEFSHDWK-DPPNNICTYYQKGFCSYGSRCRYEHVKP 373 +K V C++F HG C +G C FSHD P+ +C +YQ+G C+YG+RCRY+HVKP Sbjct: 3 TKHVTCRYFLHGVCREGGRCLFSHDLATSKPSTVCRFYQRGQCAYGARCRYDHVKP 58 The following BLAST results are available for this feature:
BLAST of FC930966 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 16
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >FC930966 ID=FC930966; Name=FC930966; organism=Citrus clementina; type=EST; length=709bpback to top |