FC930967
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC930967 vs. ExPASy Swiss-Prot
Match: TXND2_RAT (Thioredoxin domain-containing protein 2 OS=Rattus norvegicus GN=Txndc2 PE=1 SV=2) HSP 1 Score: 67.0106 bits (162), Expect = 7.353e-11 Identity = 40/130 (30.77%), Postives = 69/130 (53.08%), Query Frame = 1 Query: 4 KTQKQISRNQNREVI*LVIIIKMAEEGQVISCHTVESWNEQLQKGIAAKKLIVVDFTASWCPPCKLMSPILSELAKKLPAVIFLKVDVDELKSVAEEWAVEAMPTFVLTKEGKVLERIVGAKKDELQLAV 393 K+ + + ++N E+ I+ EEG V E + E L+ A +KL+ VDF+A WC PC+ M P L+ K VIFL+VD ++ + + ++ V +PTF K + + GA ++L+ ++ Sbjct: 420 KSSEDVQPSEN-EIFPFEAEIETLEEGMVRVIKDKEEFEEVLKD--AGEKLVAVDFSAPWCGPCRKMRPHFHSLSLKHEDVIFLEVDTEDCEQLVQDCEVFHLPTFQFYKNEEKVGEFSGALVEKLEKSI 546
BLAST of FC930967 vs. ExPASy Swiss-Prot
Match: TRXB_MYCLE (Bifunctional thioredoxin reductase/thioredoxin OS=Mycobacterium leprae GN=trxB/A PE=3 SV=1) HSP 1 Score: 67.0106 bits (162), Expect = 7.353e-11 Identity = 31/78 (39.74%), Postives = 55/78 (70.51%), Query Frame = 1 Query: 139 IAAKKLIVVDFTASWCPPCKLMSPILSELA-KKLPAVIFLKVDVDELKSVAEEWAVEAMPTFVLTKEGKVLERIVGAK 369 +++ K ++VDF A+WC PCK+++P+L E+A ++ + K+DVD +A E+ V ++PT +L + G+ ++RIVGAK Sbjct: 364 LSSNKPVLVDFWATWCGPCKMVAPVLEEIASEQRNQLTVAKLDVDTNPEMAREFQVVSIPTMILFQGGQPVKRIVGAK 441
BLAST of FC930967 vs. ExPASy Swiss-Prot
Match: THIO_MYCSM (Thioredoxin OS=Mycobacterium smegmatis GN=trxA PE=3 SV=1) HSP 1 Score: 67.0106 bits (162), Expect = 7.353e-11 Identity = 32/80 (40.00%), Postives = 53/80 (66.25%), Query Frame = 1 Query: 139 IAAKKLIVVDFTASWCPPCKLMSPILSELAKKLP---AVIFLKVDVDELKSVAEEWAVEAMPTFVLTKEGKVLERIVGAK 369 + + K ++VDF A+WC PCK+++P+L E+A + V + VDVD + A ++ V ++PT +L K+G ++RIVGAK Sbjct: 20 LGSSKPVLVDFWATWCGPCKMVAPVLEEIAAEKGDQLTVAKIDVDVDANPATARDFQVVSIPTMILFKDGAPVKRIVGAK 99
BLAST of FC930967 vs. ExPASy Swiss-Prot
Match: THIO1_DROYA (Thioredoxin-1 OS=Drosophila yakuba GN=dhd PE=2 SV=2) HSP 1 Score: 66.6254 bits (161), Expect = 9.604e-11 Identity = 35/97 (36.08%), Postives = 57/97 (58.76%), Query Frame = 1 Query: 94 SCHTVESWNEQLQKGIAAKKLIVVDFTASWCPPCKLMSPILSELAKKLPA-VIFLKVDVDELKSVAEEWAVEAMPTFVLTKEGKVLERIVGAKKDEL 381 S T+ ++++++ A KLIV+DF A+WC PCK M + LA+K + LK+DVD+ + + E + V +MPTFV + + L GA + +L Sbjct: 3 SVRTMTDFHKRIEA--ADDKLIVLDFYANWCGPCKDMESTVKSLARKYSTKAVVLKIDVDKFEELTERYKVRSMPTFVFLRNNRRLAAFSGADEHKL 97 The following BLAST results are available for this feature:
BLAST of FC930967 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 104
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Sequences
The
following sequences are available for this feature:
EST sequence >FC930967 ID=FC930967; Name=FC930967; organism=Citrus clementina; type=EST; length=567bpback to top |