FC930974

Overview
NameFC930974
Unique NameFC930974
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length513
Libraries
Library NameType
PostHarvP1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC930974 vs. ExPASy Swiss-Prot
Match: METK_BACC4 (S-adenosylmethionine synthetase OS=Bacillus cereus (strain B4264) GN=metK PE=3 SV=1)

HSP 1 Score: 214.927 bits (546), Expect = 1.693e-55
Identity = 112/168 (66.67%), Postives = 131/168 (77.98%), Query Frame = 3
Query:    3 TPELMPLSHVLATKLGAKLTEVRKNGTCPWLRPDGKTQVTVEYYNENGAMVPVRVHTVLISTQHDETVTNDEIAADLKQHVIKPVIPDKYLDDKTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTYGGWXAHGGGAFSGKDPTKVDRSGAYIVRQAAKSIVASGLARR 506
            T ELMPL   LA KL  +LTEVRK+ T  +LRPDGKTQVTVEY +ENG   PVRV T++ISTQH   VT +EI  DLK+HVIK V+P + +D +T F +NP+GRFVIGGP GDAGLTGRKII+DTYGG+  HGGGAFSGKD TKVDRS AY  R  AK+IVA+GLA +
Sbjct:  144 TQELMPLPISLAHKLARRLTEVRKDDTLSYLRPDGKTQVTVEY-DENGK--PVRVDTIVISTQHHPDVTWEEIDRDLKEHVIKAVVPAELMDGETKFFINPTGRFVIGGPQGDAGLTGRKIIVDTYGGYARHGGGAFSGKDATKVDRSAAYAARYVAKNIVAAGLAEK 308          
BLAST of FC930974 vs. ExPASy Swiss-Prot
Match: METK_BACC1 (S-adenosylmethionine synthetase OS=Bacillus cereus (strain ATCC 10987) GN=metK PE=3 SV=1)

HSP 1 Score: 214.927 bits (546), Expect = 1.693e-55
Identity = 112/168 (66.67%), Postives = 131/168 (77.98%), Query Frame = 3
Query:    3 TPELMPLSHVLATKLGAKLTEVRKNGTCPWLRPDGKTQVTVEYYNENGAMVPVRVHTVLISTQHDETVTNDEIAADLKQHVIKPVIPDKYLDDKTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTYGGWXAHGGGAFSGKDPTKVDRSGAYIVRQAAKSIVASGLARR 506
            T ELMPL   LA KL  +LTEVRK+ T  +LRPDGKTQVTVEY +ENG   PVRV T++ISTQH   VT +EI  DLK+HVIK V+P + +D +T F +NP+GRFVIGGP GDAGLTGRKII+DTYGG+  HGGGAFSGKD TKVDRS AY  R  AK+IVA+GLA +
Sbjct:  144 TQELMPLPISLAHKLARRLTEVRKDDTLSYLRPDGKTQVTVEY-DENGK--PVRVDTIVISTQHHPDVTWEEIDRDLKEHVIKAVVPAELIDGETKFFINPTGRFVIGGPQGDAGLTGRKIIVDTYGGYARHGGGAFSGKDATKVDRSAAYAARYVAKNIVAAGLAEK 308          
BLAST of FC930974 vs. ExPASy Swiss-Prot
Match: METK_BACWK (S-adenosylmethionine synthetase OS=Bacillus weihenstephanensis (strain KBAB4) GN=metK PE=3 SV=1)

HSP 1 Score: 214.157 bits (544), Expect = 2.888e-55
Identity = 112/166 (67.47%), Postives = 130/166 (78.31%), Query Frame = 3
Query:    3 TPELMPLSHVLATKLGAKLTEVRKNGTCPWLRPDGKTQVTVEYYNENGAMVPVRVHTVLISTQHDETVTNDEIAADLKQHVIKPVIPDKYLDDKTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTYGGWXAHGGGAFSGKDPTKVDRSGAYIVRQAAKSIVASGLA 500
            T ELMPL   LA KL  +LTEVRK+ T  +LRPDGKTQVTVEY +ENG   PVRV T++ISTQH   VT +EI  DLK+HVIK V+P + +D +T F +NP+GRFVIGGP GDAGLTGRKII+DTYGG+  HGGGAFSGKD TKVDRS AY  R  AK+IVA+GLA
Sbjct:  144 TQELMPLPISLAHKLARRLTEVRKDDTLSYLRPDGKTQVTVEY-DENGK--PVRVDTIVISTQHHPDVTWEEIDRDLKEHVIKAVVPAELMDGETKFFINPTGRFVIGGPQGDAGLTGRKIIVDTYGGYARHGGGAFSGKDATKVDRSAAYAARYVAKNIVAAGLA 306          
BLAST of FC930974 vs. ExPASy Swiss-Prot
Match: METK_BACCN (S-adenosylmethionine synthetase OS=Bacillus cereus subsp. cytotoxis (strain NVH 391-98) GN=metK PE=3 SV=1)

HSP 1 Score: 214.157 bits (544), Expect = 2.888e-55
Identity = 110/168 (65.48%), Postives = 132/168 (78.57%), Query Frame = 3
Query:    3 TPELMPLSHVLATKLGAKLTEVRKNGTCPWLRPDGKTQVTVEYYNENGAMVPVRVHTVLISTQHDETVTNDEIAADLKQHVIKPVIPDKYLDDKTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTYGGWXAHGGGAFSGKDPTKVDRSGAYIVRQAAKSIVASGLARR 506
            T ELMPL   LA KL  +LTEVRK+ T  +LRPDGKTQVTVEY +ENG   PVRV T++ISTQH   +T ++I  DLK+HVIK V+P + +D++T F +NP+GRFVIGGP GDAGLTGRKII+DTYGG+  HGGGAFSGKD TKVDRS AY  R  AK+IVA+GLA +
Sbjct:  144 TKELMPLPISLAHKLARRLTEVRKDETLEYLRPDGKTQVTVEY-DENGK--PVRVDTIVISTQHHPEITWEQIDRDLKEHVIKAVVPAELMDEETKFFINPTGRFVIGGPQGDAGLTGRKIIVDTYGGYARHGGGAFSGKDATKVDRSAAYAARYVAKNIVAAGLAEK 308          
BLAST of FC930974 vs. ExPASy Swiss-Prot
Match: METK_BACC2 (S-adenosylmethionine synthetase OS=Bacillus cereus (strain G9842) GN=metK PE=3 SV=1)

HSP 1 Score: 214.157 bits (544), Expect = 2.888e-55
Identity = 112/166 (67.47%), Postives = 130/166 (78.31%), Query Frame = 3
Query:    3 TPELMPLSHVLATKLGAKLTEVRKNGTCPWLRPDGKTQVTVEYYNENGAMVPVRVHTVLISTQHDETVTNDEIAADLKQHVIKPVIPDKYLDDKTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTYGGWXAHGGGAFSGKDPTKVDRSGAYIVRQAAKSIVASGLA 500
            T ELMPL   LA KL  +LTEVRK+ T  +LRPDGKTQVTVEY +ENG   PVRV T++ISTQH   VT +EI  DLK+HVIK V+P + +D +T F +NP+GRFVIGGP GDAGLTGRKII+DTYGG+  HGGGAFSGKD TKVDRS AY  R  AK+IVA+GLA
Sbjct:  144 TQELMPLPISLAHKLARRLTEVRKDDTLSYLRPDGKTQVTVEY-DENGK--PVRVDTIVISTQHHPDVTWEEIDRDLKEHVIKAVVPAELMDGETKFFINPTGRFVIGGPQGDAGLTGRKIIVDTYGGYARHGGGAFSGKDATKVDRSAAYAARYVAKNIVAAGLA 306          
BLAST of FC930974 vs. ExPASy Swiss-Prot
Match: METK_SYMTH (S-adenosylmethionine synthetase OS=Symbiobacterium thermophilum GN=metK PE=3 SV=1)

HSP 1 Score: 212.616 bits (540), Expect = 8.402e-55
Identity = 104/169 (61.54%), Postives = 129/169 (76.33%), Query Frame = 3
Query:    3 TPELMPLSHVLATKLGAKLTEVRKNGTCPWLRPDGKTQVTVEYYNENGAMVPVRVHTVLISTQHDETVTNDEIAADLKQHVIKPVIPDKYLDDKTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTYGGWXAHGGGAFSGKDPTKVDRSGAYIVRQAAKSIVASGLARRC 509
            TPELMPL   LA +L  +L +VRKNGT P+LRPDGKTQVT+EY  E+G   P R+ T++IS QHD   T ++I  D+  +VI  V+    +DD+T + +NP+GRFV+GGP GD GLTGRKII+DTYGG+  HGGGAFSGKDPTKVDRSGAY  R  AK+IVA+GLAR+C
Sbjct:  144 TPELMPLPISLAHRLARRLAQVRKNGTLPYLRPDGKTQVTIEY--EDGR--PKRIDTIVISAQHDPDTTQEQIRKDVIDYVILDVVDRNLIDDRTRYFINPTGRFVVGGPQGDTGLTGRKIIVDTYGGYARHGGGAFSGKDPTKVDRSGAYAARWVAKNIVAAGLARKC 308          
BLAST of FC930974 vs. ExPASy Swiss-Prot
Match: METK_CARHZ (S-adenosylmethionine synthetase OS=Carboxydothermus hydrogenoformans (strain Z-2901 / DSM 6008) GN=metK PE=3 SV=1)

HSP 1 Score: 211.846 bits (538), Expect = 1.433e-54
Identity = 104/166 (62.65%), Postives = 127/166 (76.51%), Query Frame = 3
Query:    3 TPELMPLSHVLATKLGAKLTEVRKNGTCPWLRPDGKTQVTVEYYNENGAMVPVRVHTVLISTQHDETVTNDEIAADLKQHVIKPVIPDKYLDDKTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTYGGWXAHGGGAFSGKDPTKVDRSGAYIVRQAAKSIVASGLA 500
            TPELMP+   LA +L  +L EVRK+   P+LRPDGKTQVTVEY  +     PVRV T+++STQH   V+ +EI  D+ +HV+KPVIP+  LD+ T + +NP+GRFVIGGP GDAGLTGRKII+DTYGG   HGGGAFSGKDPTKVDRS AY  R  AK+IVA+G+A
Sbjct:  142 TPELMPMPISLAHRLARRLAEVRKSRLLPYLRPDGKTQVTVEYDGDK----PVRVDTIVVSTQHHPDVSQEEIRKDIIEHVVKPVIPEHLLDENTRYFVNPTGRFVIGGPQGDAGLTGRKIIVDTYGGMARHGGGAFSGKDPTKVDRSAAYAARYVAKNIVAAGIA 303          
BLAST of FC930974 vs. ExPASy Swiss-Prot
Match: METK_BACA2 (S-adenosylmethionine synthetase OS=Bacillus amyloliquefaciens (strain FZB42) GN=metK PE=3 SV=1)

HSP 1 Score: 211.075 bits (536), Expect = 2.445e-54
Identity = 104/169 (61.54%), Postives = 128/169 (75.74%), Query Frame = 3
Query:    3 TPELMPLSHVLATKLGAKLTEVRKNGTCPWLRPDGKTQVTVEYYNENGAMVPVRVHTVLISTQHDETVTNDEIAADLKQHVIKPVIPDKYLDDKTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTYGGWXAHGGGAFSGKDPTKVDRSGAYIVRQAAKSIVASGLARRC 509
            T ELMPL   LA KL  +L+EVRK    P+LRPDGKTQVTVEY   N    PVR+  ++ISTQH   +T ++I  +LK+HVI PV+P++ +D++T + +NP+GRFVIGGP GDAGLTGRKII+DTYGG+  HGGGAFSGKD TKVDRS AY  R  AK+IVA+GLA  C
Sbjct:  144 TKELMPLPISLAHKLARRLSEVRKEDILPYLRPDGKTQVTVEYDENNK---PVRIDAIVISTQHHPEITLEQIQRNLKEHVINPVVPEELIDEETKYFINPTGRFVIGGPQGDAGLTGRKIIVDTYGGYARHGGGAFSGKDATKVDRSAAYAARYVAKNIVAAGLADSC 309          
BLAST of FC930974 vs. ExPASy Swiss-Prot
Match: METK_STRSV (S-adenosylmethionine synthetase OS=Streptococcus sanguinis (strain SK36) GN=metK PE=3 SV=1)

HSP 1 Score: 210.69 bits (535), Expect = 3.193e-54
Identity = 109/168 (64.88%), Postives = 131/168 (77.98%), Query Frame = 3
Query:    3 TPELMPLSHVLATKLGAKLTEVRKNGTCPWLRPDGKTQVTVEYYNENGAMVPVRVHTVLISTQHDETVTNDEIAADLKQHVIKPVIPDKYLDDKTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTYGGWXAHGGGAFSGKDPTKVDRSGAYIVRQAAKSIVASGLARR 506
            TPELMPL   L+ KL  +L E+RK+G   +LRPD K+QVTVEY +EN    PVRV TV+ISTQHD   TN+EI  D+ + VIK VIP +YLDDKT F +NP+GRFVIGGP GD+GLTGRKII+DTYGG+  HGGGAFSGKD TKVDRS +Y  R  AK+IVA+GLA++
Sbjct:  142 TPELMPLPISLSHKLVRRLAELRKSGEIAYLRPDAKSQVTVEY-DENDQ--PVRVDTVVISTQHDPDATNEEIHRDVIEKVIKAVIPAQYLDDKTKFFINPTGRFVIGGPQGDSGLTGRKIIVDTYGGYARHGGGAFSGKDATKVDRSASYAARYIAKNIVAAGLAKK 306          
BLAST of FC930974 vs. ExPASy Swiss-Prot
Match: METK_BACLD (S-adenosylmethionine synthetase OS=Bacillus licheniformis (strain DSM 13 / ATCC 14580) GN=metK PE=3 SV=1)

HSP 1 Score: 210.69 bits (535), Expect = 3.193e-54
Identity = 104/169 (61.54%), Postives = 127/169 (75.15%), Query Frame = 3
Query:    3 TPELMPLSHVLATKLGAKLTEVRKNGTCPWLRPDGKTQVTVEYYNENGAMVPVRVHTVLISTQHDETVTNDEIAADLKQHVIKPVIPDKYLDDKTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTYGGWXAHGGGAFSGKDPTKVDRSGAYIVRQAAKSIVASGLARRC 509
            T ELMPL   LA KL  +LTEVRK    P+LRPDGKTQVTVEY   N    P+R+ T++ISTQH   ++ ++I  +LK+HVI PV+P + +D+ T + +NP+GRFVIGGP GDAGLTGRKII+DTYGG+  HGGGAFSGKD TKVDRS AY  R  AK+IVA+GLA  C
Sbjct:  144 TKELMPLPISLAHKLSRRLTEVRKEEILPYLRPDGKTQVTVEYDENNK---PIRIDTIVISTQHHPEISLEQIQRNLKEHVINPVVPKELIDENTKYFINPTGRFVIGGPQGDAGLTGRKIIVDTYGGYARHGGGAFSGKDATKVDRSAAYAARYVAKNIVAAGLADSC 309          
The following BLAST results are available for this feature:
BLAST of FC930974 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
METK_BACC41.693e-5566.67S-adenosylmethionine synthetase OS=Bacillus cereus... [more]
METK_BACC11.693e-5566.67S-adenosylmethionine synthetase OS=Bacillus cereus... [more]
METK_BACWK2.888e-5567.47S-adenosylmethionine synthetase OS=Bacillus weihen... [more]
METK_BACCN2.888e-5565.48S-adenosylmethionine synthetase OS=Bacillus cereus... [more]
METK_BACC22.888e-5567.47S-adenosylmethionine synthetase OS=Bacillus cereus... [more]
METK_SYMTH8.402e-5561.54S-adenosylmethionine synthetase OS=Symbiobacterium... [more]
METK_CARHZ1.433e-5462.65S-adenosylmethionine synthetase OS=Carboxydothermu... [more]
METK_BACA22.445e-5461.54S-adenosylmethionine synthetase OS=Bacillus amylol... [more]
METK_STRSV3.193e-5464.88S-adenosylmethionine synthetase OS=Streptococcus s... [more]
METK_BACLD3.193e-5461.54S-adenosylmethionine synthetase OS=Bacillus lichen... [more]

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Properties
Property NameValue
Genbank descriptionC34100A09EF PostHarvP1 Citrus clementina cDNA clone C34100A09, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC930974 ID=FC930974; Name=FC930974; organism=Citrus clementina; type=EST; length=513bp
GGACTCCTGAGTTGATGCCTTTGAGTCATGTGCTTGCAACAAAGCTTGGT
GCTAAGCTTACAGAAGTGAGGAAGAATGGGACCTGTCCGTGGCTGAGGCC
AGATGGCAAAACACAAGTCACTGTTGAGTATTACAATGAGAATGGCGCCA
TGGTTCCTGTTCGTGTCCATACTGTGCTCATCTCAACTCAGCACGATGAG
ACTGTAACTAATGATGAGATTGCTGCAGATCTCAAGCAACATGTGATCAA
GCCTGTGATTCCTGACAAGTACTTGGATGACAAAACTATTTTCCATCTTA
ACCCATCTGGCCGTTTTGTGATTGGTGGCCCTCACGGTGATGCTGGGCTC
ACCGGCCGGAAGATTATTATTGATACTTATGGTGGCTGGNGGGCACACGG
TGGTGGGGCTTTCTCAGGGAAAGATCCTACCAAGGTTGATAGAAGCGGTG
CTTACATTGTAAGGCAAGCTGCTAAGAGTATTGTGGCAAGCGGGCTTGCC
AGGAGATGCATTG
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