FC930974

Overview
NameFC930974
Unique NameFC930974
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length513
Libraries
Library NameType
PostHarvP1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC930974 vs. ExPASy Swiss-Prot
Match: METK_STRGC (S-adenosylmethionine synthetase OS=Streptococcus gordonii (strain Challis / ATCC 35105 / CH1 / DL1 / V288) GN=metK PE=3 SV=1)

HSP 1 Score: 210.305 bits (534), Expect = 4.170e-54
Identity = 109/168 (64.88%), Postives = 131/168 (77.98%), Query Frame = 3
Query:    3 TPELMPLSHVLATKLGAKLTEVRKNGTCPWLRPDGKTQVTVEYYNENGAMVPVRVHTVLISTQHDETVTNDEIAADLKQHVIKPVIPDKYLDDKTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTYGGWXAHGGGAFSGKDPTKVDRSGAYIVRQAAKSIVASGLARR 506
            TPELMPL   L+ KL  +L E+RK+G   +LRPD K+QVTVEY +EN    PVRV TV+ISTQHD   TN+EI  D+ + VIK VIP +YLDDKT F +NP+GRFVIGGP GD+GLTGRKII+DTYGG+  HGGGAFSGKD TKVDRS +Y  R  AK+IVA+GLA++
Sbjct:  142 TPELMPLPISLSHKLVRRLAELRKSGEISYLRPDAKSQVTVEY-DENDH--PVRVDTVVISTQHDPEATNEEIHRDVIEKVIKAVIPAQYLDDKTKFFINPTGRFVIGGPQGDSGLTGRKIIVDTYGGYARHGGGAFSGKDATKVDRSASYAARYIAKNIVAAGLAKK 306          
BLAST of FC930974 vs. ExPASy Swiss-Prot
Match: METK_LACSS (S-adenosylmethionine synthetase OS=Lactobacillus sakei subsp. sakei (strain 23K) GN=metK PE=3 SV=1)

HSP 1 Score: 210.305 bits (534), Expect = 4.170e-54
Identity = 108/169 (63.91%), Postives = 130/169 (76.92%), Query Frame = 3
Query:    3 TPELMPLSHVLATKLGAKLTEVRKNGTCPWLRPDGKTQVTVEYYNENGAMVPVRVHTVLISTQHDETVTNDEIAADLKQHVIKPVIPDKYLDDKTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTYGGWXAHGGGAFSGKDPTKVDRSGAYIVRQAAKSIVASGLARRC 509
            TPELMPL   L+ +L  K+ E+RK+G   +LRPD K QVTVEY +EN    P RV TV+ISTQHDE VT + I  D+ + VIK VIP +YLDDKT + +NP+GRFVIGGP GD+GLTGRKII+DTYGG+  HGGGAFSGKD TKVDRS +Y  R  AK+IVA+GLAR+C
Sbjct:  141 TPELMPLPIALSHRLMRKVAELRKSGQLAYLRPDAKAQVTVEY-DENEQ--PKRVDTVVISTQHDEDVTLETIQKDMLEQVIKTVIPAEYLDDKTKYFINPTGRFVIGGPQGDSGLTGRKIIVDTYGGYARHGGGAFSGKDATKVDRSASYAARYIAKNIVAAGLARKC 306          
BLAST of FC930974 vs. ExPASy Swiss-Prot
Match: METK_DROME (S-adenosylmethionine synthetase OS=Drosophila melanogaster GN=M(2)21AB PE=1 SV=2)

HSP 1 Score: 210.305 bits (534), Expect = 4.170e-54
Identity = 100/170 (58.82%), Postives = 125/170 (73.53%), Query Frame = 3
Query:    3 TPELMPLSHVLATKLGAKLTEVRKNGTCPWLRPDGKTQVTVEYYNENGAMVPVRVHTVLISTQHDETVTNDEIAADLKQHVIKPVIPDKYLDDKTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTYGGWXAHGGGAFSGKDPTKVDRSGAYIVRQAAKSIVASGLARRCI 512
            T E MPL+ VLA KL  K+ E+R++    W RPD KTQVT EY    G+ VP RVHT+++S QH E ++ + + +++ + V+K VIP KY+D  TI H+NP G FVIGGP GDAGLTGRKII+DTYGGW AHGGGAFSGKD TKVDRS AY  R  AKS+V +GL +RC+
Sbjct:  157 TEECMPLTVVLAHKLNEKIAELRRSDVFWWARPDSKTQVTCEYLFNQGSAVPKRVHTIVVSMQHSEKISLETLRSEVMEKVVKVVIPAKYIDANTIVHINPCGLFVIGGPMGDAGLTGRKIIVDTYGGWGAHGGGAFSGKDFTKVDRSAAYAARWVAKSLVKAGLCKRCL 326          
BLAST of FC930974 vs. ExPASy Swiss-Prot
Match: METK_CLOBM (S-adenosylmethionine synthetase OS=Clostridium botulinum (strain Loch Maree / Type A3) GN=metK PE=3 SV=1)

HSP 1 Score: 209.534 bits (532), Expect = 7.113e-54
Identity = 102/166 (61.45%), Postives = 129/166 (77.71%), Query Frame = 3
Query:    3 TPELMPLSHVLATKLGAKLTEVRKNGTCPWLRPDGKTQVTVEYYNENGAMVPVRVHTVLISTQHDETVTNDEIAADLKQHVIKPVIPDKYLDDKTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTYGGWXAHGGGAFSGKDPTKVDRSGAYIVRQAAKSIVASGLA 500
            T E MP+   +A KL  +L+EVRKNGT P+LRPDGKTQVTVEY  ENG   PVR+  ++ISTQH   V  ++I  D+K+HVIK ++P + LD+ T + +NP+GRFV+GGP GD+GLTGRKII+DTYGG+  HGGGAFSGKDPTKVDRS AY  R  AK++VA+G+A
Sbjct:  139 TKEYMPMPIEMAHKLSRRLSEVRKNGTLPYLRPDGKTQVTVEY--ENGK--PVRIDAIVISTQHGPEVYLEQIEKDIKEHVIKVIVPSELLDENTKYFINPTGRFVVGGPQGDSGLTGRKIIVDTYGGYGRHGGGAFSGKDPTKVDRSAAYAARWVAKNLVAAGVA 300          
BLAST of FC930974 vs. ExPASy Swiss-Prot
Match: METK_CLOBL (S-adenosylmethionine synthetase OS=Clostridium botulinum (strain Langeland / NCTC 10281 / Type F) GN=metK PE=3 SV=1)

HSP 1 Score: 209.534 bits (532), Expect = 7.113e-54
Identity = 102/166 (61.45%), Postives = 129/166 (77.71%), Query Frame = 3
Query:    3 TPELMPLSHVLATKLGAKLTEVRKNGTCPWLRPDGKTQVTVEYYNENGAMVPVRVHTVLISTQHDETVTNDEIAADLKQHVIKPVIPDKYLDDKTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTYGGWXAHGGGAFSGKDPTKVDRSGAYIVRQAAKSIVASGLA 500
            T E MP+   +A KL  +L+EVRKNGT P+LRPDGKTQVTVEY  ENG   PVR+  ++ISTQH   V  ++I  D+K+HVIK ++P + LD+ T + +NP+GRFV+GGP GD+GLTGRKII+DTYGG+  HGGGAFSGKDPTKVDRS AY  R  AK++VA+G+A
Sbjct:  139 TKEYMPMPIEMAHKLSRRLSEVRKNGTLPYLRPDGKTQVTVEY--ENGK--PVRIDAIVISTQHGPEVYLEQIEKDIKEHVIKVIVPSELLDENTKYFINPTGRFVVGGPQGDSGLTGRKIIVDTYGGYGRHGGGAFSGKDPTKVDRSAAYAARWVAKNLVAAGVA 300          
BLAST of FC930974 vs. ExPASy Swiss-Prot
Match: METK_CLOBK (S-adenosylmethionine synthetase OS=Clostridium botulinum (strain Okra / Type B1) GN=metK PE=3 SV=1)

HSP 1 Score: 209.534 bits (532), Expect = 7.113e-54
Identity = 102/166 (61.45%), Postives = 129/166 (77.71%), Query Frame = 3
Query:    3 TPELMPLSHVLATKLGAKLTEVRKNGTCPWLRPDGKTQVTVEYYNENGAMVPVRVHTVLISTQHDETVTNDEIAADLKQHVIKPVIPDKYLDDKTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTYGGWXAHGGGAFSGKDPTKVDRSGAYIVRQAAKSIVASGLA 500
            T E MP+   +A KL  +L+EVRKNGT P+LRPDGKTQVTVEY  ENG   PVR+  ++ISTQH   V  ++I  D+K+HVIK ++P + LD+ T + +NP+GRFV+GGP GD+GLTGRKII+DTYGG+  HGGGAFSGKDPTKVDRS AY  R  AK++VA+G+A
Sbjct:  139 TKEYMPMPIEMAHKLSRRLSEVRKNGTLPYLRPDGKTQVTVEY--ENGK--PVRIDAIVISTQHGPEVYLEQIEKDIKEHVIKVIVPSELLDENTKYFINPTGRFVVGGPQGDSGLTGRKIIVDTYGGYGRHGGGAFSGKDPTKVDRSAAYAARWVAKNLVAAGVA 300          
BLAST of FC930974 vs. ExPASy Swiss-Prot
Match: METK_CLOBH (S-adenosylmethionine synthetase OS=Clostridium botulinum (strain Hall / ATCC 3502 / NCTC 13319 / Type A) GN=metK PE=3 SV=1)

HSP 1 Score: 209.534 bits (532), Expect = 7.113e-54
Identity = 102/166 (61.45%), Postives = 129/166 (77.71%), Query Frame = 3
Query:    3 TPELMPLSHVLATKLGAKLTEVRKNGTCPWLRPDGKTQVTVEYYNENGAMVPVRVHTVLISTQHDETVTNDEIAADLKQHVIKPVIPDKYLDDKTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTYGGWXAHGGGAFSGKDPTKVDRSGAYIVRQAAKSIVASGLA 500
            T E MP+   +A KL  +L+EVRKNGT P+LRPDGKTQVTVEY  ENG   PVR+  ++ISTQH   V  ++I  D+K+HVIK ++P + LD+ T + +NP+GRFV+GGP GD+GLTGRKII+DTYGG+  HGGGAFSGKDPTKVDRS AY  R  AK++VA+G+A
Sbjct:  139 TKEYMPMPIEMAHKLSRRLSEVRKNGTLPYLRPDGKTQVTVEY--ENGK--PVRIDAIVISTQHGPEVYLEQIEKDIKEHVIKVIVPSELLDENTKYFINPTGRFVVGGPQGDSGLTGRKIIVDTYGGYGRHGGGAFSGKDPTKVDRSAAYAARWVAKNLVAAGVA 300          
BLAST of FC930974 vs. ExPASy Swiss-Prot
Match: METK_CLOB1 (S-adenosylmethionine synthetase OS=Clostridium botulinum (strain ATCC 19397 / Type A) GN=metK PE=3 SV=1)

HSP 1 Score: 209.534 bits (532), Expect = 7.113e-54
Identity = 102/166 (61.45%), Postives = 129/166 (77.71%), Query Frame = 3
Query:    3 TPELMPLSHVLATKLGAKLTEVRKNGTCPWLRPDGKTQVTVEYYNENGAMVPVRVHTVLISTQHDETVTNDEIAADLKQHVIKPVIPDKYLDDKTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTYGGWXAHGGGAFSGKDPTKVDRSGAYIVRQAAKSIVASGLA 500
            T E MP+   +A KL  +L+EVRKNGT P+LRPDGKTQVTVEY  ENG   PVR+  ++ISTQH   V  ++I  D+K+HVIK ++P + LD+ T + +NP+GRFV+GGP GD+GLTGRKII+DTYGG+  HGGGAFSGKDPTKVDRS AY  R  AK++VA+G+A
Sbjct:  139 TKEYMPMPIEMAHKLSRRLSEVRKNGTLPYLRPDGKTQVTVEY--ENGK--PVRIDAIVISTQHGPEVYLEQIEKDIKEHVIKVIVPSELLDENTKYFINPTGRFVVGGPQGDSGLTGRKIIVDTYGGYGRHGGGAFSGKDPTKVDRSAAYAARWVAKNLVAAGVA 300          
BLAST of FC930974 vs. ExPASy Swiss-Prot
Match: METK_THENN (S-adenosylmethionine synthetase OS=Thermotoga neapolitana (strain ATCC 49049 / DSM 4359 / NS-E) GN=metK PE=3 SV=1)

HSP 1 Score: 209.149 bits (531), Expect = 9.290e-54
Identity = 102/166 (61.45%), Postives = 124/166 (74.70%), Query Frame = 3
Query:    3 TPELMPLSHVLATKLGAKLTEVRKNGTCPWLRPDGKTQVTVEYYNENGAMVPVRVHTVLISTQHDETVTNDEIAADLKQHVIKPVIPDKYLDDKTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTYGGWXAHGGGAFSGKDPTKVDRSGAYIVRQAAKSIVASGLA 500
            TPE MPL   LA +L  +L EVRK G  P+LRPDGKTQVT+EY ++     PVRV TVLISTQHD  ++  ++   + +HVI PVIP++Y DDK    +NP+GRFV+GGP  D GLTGRKII+DTYGGW  HGGGAFSGKDPTKVDRS  Y+ R  AK++VA+GLA
Sbjct:  141 TPEYMPLPITLAHRLAMRLAEVRKKGILPFLRPDGKTQVTIEYEDDK----PVRVDTVLISTQHDPDISQADLREAIIEHVINPVIPEEYRDDKMKILVNPTGRFVLGGPMADTGLTGRKIIVDTYGGWVPHGGGAFSGKDPTKVDRSAHYMARYVAKNVVAAGLA 302          
BLAST of FC930974 vs. ExPASy Swiss-Prot
Match: METK_CLOBJ (S-adenosylmethionine synthetase OS=Clostridium botulinum (strain Kyoto / Type A2) GN=metK PE=3 SV=1)

HSP 1 Score: 209.149 bits (531), Expect = 9.290e-54
Identity = 101/166 (60.84%), Postives = 129/166 (77.71%), Query Frame = 3
Query:    3 TPELMPLSHVLATKLGAKLTEVRKNGTCPWLRPDGKTQVTVEYYNENGAMVPVRVHTVLISTQHDETVTNDEIAADLKQHVIKPVIPDKYLDDKTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTYGGWXAHGGGAFSGKDPTKVDRSGAYIVRQAAKSIVASGLA 500
            T E MP+   +A KL  +L+EVRKNGT P+LRPDGKTQVTVEY  ENG   PVR+  ++ISTQH   +  ++I  D+K+HVIK ++P + LD+ T + +NP+GRFV+GGP GD+GLTGRKII+DTYGG+  HGGGAFSGKDPTKVDRS AY  R  AK++VA+G+A
Sbjct:  139 TKEYMPMPIEMAHKLSRRLSEVRKNGTLPYLRPDGKTQVTVEY--ENGK--PVRIDAIVISTQHGPEIYLEQIEKDIKEHVIKVIVPSELLDENTKYFINPTGRFVVGGPQGDSGLTGRKIIVDTYGGYGRHGGGAFSGKDPTKVDRSAAYAARWVAKNLVAAGVA 300          
The following BLAST results are available for this feature:
BLAST of FC930974 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
METK_STRGC4.170e-5464.88S-adenosylmethionine synthetase OS=Streptococcus g... [more]
METK_LACSS4.170e-5463.91S-adenosylmethionine synthetase OS=Lactobacillus s... [more]
METK_DROME4.170e-5458.82S-adenosylmethionine synthetase OS=Drosophila mela... [more]
METK_CLOBM7.113e-5461.45S-adenosylmethionine synthetase OS=Clostridium bot... [more]
METK_CLOBL7.113e-5461.45S-adenosylmethionine synthetase OS=Clostridium bot... [more]
METK_CLOBK7.113e-5461.45S-adenosylmethionine synthetase OS=Clostridium bot... [more]
METK_CLOBH7.113e-5461.45S-adenosylmethionine synthetase OS=Clostridium bot... [more]
METK_CLOB17.113e-5461.45S-adenosylmethionine synthetase OS=Clostridium bot... [more]
METK_THENN9.290e-5461.45S-adenosylmethionine synthetase OS=Thermotoga neap... [more]
METK_CLOBJ9.290e-5460.84S-adenosylmethionine synthetase OS=Clostridium bot... [more]

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Properties
Property NameValue
Genbank descriptionC34100A09EF PostHarvP1 Citrus clementina cDNA clone C34100A09, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC930974 ID=FC930974; Name=FC930974; organism=Citrus clementina; type=EST; length=513bp
GGACTCCTGAGTTGATGCCTTTGAGTCATGTGCTTGCAACAAAGCTTGGT
GCTAAGCTTACAGAAGTGAGGAAGAATGGGACCTGTCCGTGGCTGAGGCC
AGATGGCAAAACACAAGTCACTGTTGAGTATTACAATGAGAATGGCGCCA
TGGTTCCTGTTCGTGTCCATACTGTGCTCATCTCAACTCAGCACGATGAG
ACTGTAACTAATGATGAGATTGCTGCAGATCTCAAGCAACATGTGATCAA
GCCTGTGATTCCTGACAAGTACTTGGATGACAAAACTATTTTCCATCTTA
ACCCATCTGGCCGTTTTGTGATTGGTGGCCCTCACGGTGATGCTGGGCTC
ACCGGCCGGAAGATTATTATTGATACTTATGGTGGCTGGNGGGCACACGG
TGGTGGGGCTTTCTCAGGGAAAGATCCTACCAAGGTTGATAGAAGCGGTG
CTTACATTGTAAGGCAAGCTGCTAAGAGTATTGTGGCAAGCGGGCTTGCC
AGGAGATGCATTG
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