FC930974

Overview
NameFC930974
Unique NameFC930974
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length513
Libraries
Library NameType
PostHarvP1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC930974 vs. ExPASy Swiss-Prot
Match: METK_CLOTE (S-adenosylmethionine synthetase OS=Clostridium tetani GN=metK PE=3 SV=1)

HSP 1 Score: 208.764 bits (530), Expect = 1.213e-53
Identity = 98/166 (59.04%), Postives = 129/166 (77.71%), Query Frame = 3
Query:    3 TPELMPLSHVLATKLGAKLTEVRKNGTCPWLRPDGKTQVTVEYYNENGAMVPVRVHTVLISTQHDETVTNDEIAADLKQHVIKPVIPDKYLDDKTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTYGGWXAHGGGAFSGKDPTKVDRSGAYIVRQAAKSIVASGLA 500
            T E MP++  +A KL  +L+EVRKNGT P+LRPDGKTQVTVEY +       +R+ T+++STQH   VT ++I  D+ +HVI  V+P ++LD+ T +++NP+GRFV+GGP GDAGLTGRKII+DTYGG+  HGGGAFSGKDPTKVDRS AY  R  AK++VA+G+A
Sbjct:  139 TSEYMPMAISIAHKLSRRLSEVRKNGTLPYLRPDGKTQVTVEYEDNKA----IRIDTIVVSTQHGPEVTREQIEKDIFEHVISKVVPVEFLDENTNYYINPTGRFVVGGPQGDAGLTGRKIIVDTYGGYGRHGGGAFSGKDPTKVDRSAAYAARWVAKNLVAAGVA 300          
BLAST of FC930974 vs. ExPASy Swiss-Prot
Match: METK_STACT (S-adenosylmethionine synthetase OS=Staphylococcus carnosus (strain TM300) GN=metK PE=3 SV=1)

HSP 1 Score: 207.994 bits (528), Expect = 2.069e-53
Identity = 103/169 (60.95%), Postives = 128/169 (75.74%), Query Frame = 3
Query:    3 TPELMPLSHVLATKLGAKLTEVRKNGTCPWLRPDGKTQVTVEYYNENGAMVPVRVHTVLISTQHDETVTNDEIAADLKQHVIKPVIPDKYLDDKTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTYGGWXAHGGGAFSGKDPTKVDRSGAYIVRQAAKSIVASGLARRC 509
            T   MP     + +L  +L++VRK+GT  +LRPDGK QVTVEY +EN    PVR+ T++ISTQH E VT D+I  D+++HVI P++P   LDD+T F +NP+GRFVIGGP GDAGLTGRKII+DTYGG+  HGGG FSGKDPTKVDRS AY  R  AK+IVA+GLA +C
Sbjct:  143 TDTYMPTPIYFSHQLAKRLSDVRKDGTLKYLRPDGKVQVTVEY-DENDK--PVRIDTIVISTQHAEDVTLDQIQEDIRKHVIDPIVPASLLDDETKFFINPTGRFVIGGPQGDAGLTGRKIIVDTYGGFARHGGGCFSGKDPTKVDRSAAYAARYVAKNIVAAGLADKC 308          
BLAST of FC930974 vs. ExPASy Swiss-Prot
Match: METK_DEIRA (S-adenosylmethionine synthetase OS=Deinococcus radiodurans GN=metK PE=3 SV=1)

HSP 1 Score: 207.994 bits (528), Expect = 2.069e-53
Identity = 104/170 (61.18%), Postives = 126/170 (74.12%), Query Frame = 3
Query:    3 TPELMPLSHVLATKLGAKLTEVRKNGTCPWLRPDGKTQVTVEYYNENGAMVPVRVHTVLISTQHDETVTNDEIAADLKQHVIKPVIPDKYLDDKTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTYGGWXAHGGGAFSGKDPTKVDRSGAYIVRQAAKSIVASGLARRCI 512
            TPELMPL   LA  L  +L E+RK+GT P+LRPD K QVTV    E  +     V T++ISTQH + VT ++I AD+ +HVI  VIP + L+++T + +NPSGRFVIGGPHGD GLTGRKII+DTYGG   HGGGAFSGKDPTKVDRS AY  R  AK+IVA+GLARR +
Sbjct:  152 TPELMPLPISLAHGLTRRLAELRKDGTLPYLRPDAKAQVTVVRNGEPHSATETAVDTIVISTQHSDDVTQEQIRADMLEHVIPAVIPAELLNEQTRYFINPSGRFVIGGPHGDTGLTGRKIIVDTYGGAVPHGGGAFSGKDPTKVDRSAAYYARYVAKNIVAAGLARRAL 321          
BLAST of FC930974 vs. ExPASy Swiss-Prot
Match: METK_CLOPH (S-adenosylmethionine synthetase OS=Clostridium phytofermentans (strain ATCC 700394 / DSM 18823 / ISDg) GN=metK PE=3 SV=1)

HSP 1 Score: 207.994 bits (528), Expect = 2.069e-53
Identity = 104/169 (61.54%), Postives = 133/169 (78.70%), Query Frame = 3
Query:    3 TPELMPLSHVLATKLGAKLTEVRKNGTCPWLRPDGKTQVTVEYYNENGAMVPVRVHTVLISTQHDETVTNDEIAADLKQHVIKPVIPDKYLDDKTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTYGGWXAHGGGAFSGKDPTKVDRSGAYIVRQAAKSIVASGLARRC 509
            T ELMP    LA KL  +L++VRK+GT  +LRPDGK+QVTVEY NE G   PV ++ V++STQHD  VT ++I  D+K++V +PV+P + +D+KT F +NP+GRFVIGGP+GD+GLTGRKII+DTYGG+  HGGGAFSGKD TKVDRS +Y  R  AK+IVASGLA +C
Sbjct:  143 TEELMPYPISLAHKLTKQLSKVRKDGTLSYLRPDGKSQVTVEY-NEEGK--PVHLNAVVLSTQHDPDVTQEQIHEDIKKYVFEPVLPKEMVDEKTKFFINPTGRFVIGGPNGDSGLTGRKIIVDTYGGYARHGGGAFSGKDCTKVDRSASYAARYVAKNIVASGLADKC 308          
BLAST of FC930974 vs. ExPASy Swiss-Prot
Match: METK_CHLSY (S-adenosylmethionine synthetase OS=Chloroflexus aurantiacus (strain ATCC 29364 / DSM 637 / Y-400-fl) GN=metK PE=3 SV=1)

HSP 1 Score: 207.608 bits (527), Expect = 2.703e-53
Identity = 108/168 (64.29%), Postives = 127/168 (75.60%), Query Frame = 3
Query:    3 TPELMPLSHVLATKLGAKLTEVRKNGTCPWLRPDGKTQVTVEYYNENGAMVPVRVHTVLISTQHDETVTNDEIAADLKQHVIKPVIPDKYLDDKTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTYGGWXAHGGGAFSGKDPTKVDRSGAYIVRQAAKSIVASGLARR 506
            TPELMP S  LA +L  +L  VRK+GT P+LRPD K+QVTVEY        PVRV TVLIS+QH   +T D+I ADL +HVIK  IP+ +LD +T   +NP+GRFVIGGP GD+GLTGRKII+DTYGG   HGGGAFSGKDP+KVDRS AY  R  AK+IVA+GLARR
Sbjct:  149 TPELMPASIALAHRLIRRLERVRKDGTLPYLRPDAKSQVTVEYSFGK----PVRVDTVLISSQHAPDITQDQIRADLIEHVIKTEIPEAWLDSQTKIFINPTGRFVIGGPMGDSGLTGRKIIVDTYGGVARHGGGAFSGKDPSKVDRSAAYACRWVAKNIVAAGLARR 312          
BLAST of FC930974 vs. ExPASy Swiss-Prot
Match: METK_CHLAA (S-adenosylmethionine synthetase OS=Chloroflexus aurantiacus (strain ATCC 29366 / DSM 635 / J-10-fl) GN=metK PE=3 SV=1)

HSP 1 Score: 207.608 bits (527), Expect = 2.703e-53
Identity = 108/168 (64.29%), Postives = 127/168 (75.60%), Query Frame = 3
Query:    3 TPELMPLSHVLATKLGAKLTEVRKNGTCPWLRPDGKTQVTVEYYNENGAMVPVRVHTVLISTQHDETVTNDEIAADLKQHVIKPVIPDKYLDDKTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTYGGWXAHGGGAFSGKDPTKVDRSGAYIVRQAAKSIVASGLARR 506
            TPELMP S  LA +L  +L  VRK+GT P+LRPD K+QVTVEY        PVRV TVLIS+QH   +T D+I ADL +HVIK  IP+ +LD +T   +NP+GRFVIGGP GD+GLTGRKII+DTYGG   HGGGAFSGKDP+KVDRS AY  R  AK+IVA+GLARR
Sbjct:  149 TPELMPASIALAHRLIRRLERVRKDGTLPYLRPDAKSQVTVEYSFGK----PVRVDTVLISSQHAPDITQDQIRADLIEHVIKTEIPEAWLDSQTKIFINPTGRFVIGGPMGDSGLTGRKIIVDTYGGVARHGGGAFSGKDPSKVDRSAAYACRWVAKNIVAAGLARR 312          
BLAST of FC930974 vs. ExPASy Swiss-Prot
Match: METK_STAAW (S-adenosylmethionine synthetase OS=Staphylococcus aureus (strain MW2) GN=metK PE=3 SV=1)

HSP 1 Score: 207.223 bits (526), Expect = 3.530e-53
Identity = 101/170 (59.41%), Postives = 131/170 (77.06%), Query Frame = 3
Query:    3 TPELMPLSHVLATKLGAKLTEVRKNGTCPWLRPDGKTQVTVEY-YNENGAMVPVRVHTVLISTQHDETVTNDEIAADLKQHVIKPVIPDKYLDDKTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTYGGWXAHGGGAFSGKDPTKVDRSGAYIVRQAAKSIVASGLARRC 509
            T   MPL+  L+ +L  +L++VRK+GT  +LRPDGK QVTVEY  N+N    PVR+ T+++STQH E VT ++I  D+K HVI P +P+  ++++T F++NP+GRFVIGGP GDAGLTGRKII+DTYGG+  HGGG FSGKDPTKVDRS AY  R  AK+IVA+GLA +C
Sbjct:  143 TETYMPLAIYLSHQLAKRLSDVRKDGTLNYLRPDGKVQVTVEYDENDN----PVRIDTIVVSTQHAEDVTLEQIQEDIKAHVIYPTVPENLINEQTKFYINPTGRFVIGGPQGDAGLTGRKIIVDTYGGYARHGGGCFSGKDPTKVDRSAAYAARYVAKNIVAAGLADQC 308          
BLAST of FC930974 vs. ExPASy Swiss-Prot
Match: METK_STAAT (S-adenosylmethionine synthetase OS=Staphylococcus aureus (strain USA300 / TCH1516) GN=metK PE=3 SV=1)

HSP 1 Score: 207.223 bits (526), Expect = 3.530e-53
Identity = 101/170 (59.41%), Postives = 131/170 (77.06%), Query Frame = 3
Query:    3 TPELMPLSHVLATKLGAKLTEVRKNGTCPWLRPDGKTQVTVEY-YNENGAMVPVRVHTVLISTQHDETVTNDEIAADLKQHVIKPVIPDKYLDDKTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTYGGWXAHGGGAFSGKDPTKVDRSGAYIVRQAAKSIVASGLARRC 509
            T   MPL+  L+ +L  +L++VRK+GT  +LRPDGK QVTVEY  N+N    PVR+ T+++STQH E VT ++I  D+K HVI P +P+  ++++T F++NP+GRFVIGGP GDAGLTGRKII+DTYGG+  HGGG FSGKDPTKVDRS AY  R  AK+IVA+GLA +C
Sbjct:  143 TETYMPLAIYLSHQLAKRLSDVRKDGTLNYLRPDGKVQVTVEYDENDN----PVRIDTIVVSTQHAEDVTLEQIQEDIKAHVIYPTVPENLINEQTKFYINPTGRFVIGGPQGDAGLTGRKIIVDTYGGYARHGGGCFSGKDPTKVDRSAAYAARYVAKNIVAAGLADQC 308          
BLAST of FC930974 vs. ExPASy Swiss-Prot
Match: METK_STAAS (S-adenosylmethionine synthetase OS=Staphylococcus aureus (strain MSSA476) GN=metK PE=3 SV=1)

HSP 1 Score: 207.223 bits (526), Expect = 3.530e-53
Identity = 101/170 (59.41%), Postives = 131/170 (77.06%), Query Frame = 3
Query:    3 TPELMPLSHVLATKLGAKLTEVRKNGTCPWLRPDGKTQVTVEY-YNENGAMVPVRVHTVLISTQHDETVTNDEIAADLKQHVIKPVIPDKYLDDKTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTYGGWXAHGGGAFSGKDPTKVDRSGAYIVRQAAKSIVASGLARRC 509
            T   MPL+  L+ +L  +L++VRK+GT  +LRPDGK QVTVEY  N+N    PVR+ T+++STQH E VT ++I  D+K HVI P +P+  ++++T F++NP+GRFVIGGP GDAGLTGRKII+DTYGG+  HGGG FSGKDPTKVDRS AY  R  AK+IVA+GLA +C
Sbjct:  143 TETYMPLAIYLSHQLAKRLSDVRKDGTLNYLRPDGKVQVTVEYDENDN----PVRIDTIVVSTQHAEDVTLEQIQEDIKAHVIYPTVPENLINEQTKFYINPTGRFVIGGPQGDAGLTGRKIIVDTYGGYARHGGGCFSGKDPTKVDRSAAYAARYVAKNIVAAGLADQC 308          
BLAST of FC930974 vs. ExPASy Swiss-Prot
Match: METK_STAAE (S-adenosylmethionine synthetase OS=Staphylococcus aureus (strain Newman) GN=metK PE=3 SV=1)

HSP 1 Score: 207.223 bits (526), Expect = 3.530e-53
Identity = 101/170 (59.41%), Postives = 131/170 (77.06%), Query Frame = 3
Query:    3 TPELMPLSHVLATKLGAKLTEVRKNGTCPWLRPDGKTQVTVEY-YNENGAMVPVRVHTVLISTQHDETVTNDEIAADLKQHVIKPVIPDKYLDDKTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTYGGWXAHGGGAFSGKDPTKVDRSGAYIVRQAAKSIVASGLARRC 509
            T   MPL+  L+ +L  +L++VRK+GT  +LRPDGK QVTVEY  N+N    PVR+ T+++STQH E VT ++I  D+K HVI P +P+  ++++T F++NP+GRFVIGGP GDAGLTGRKII+DTYGG+  HGGG FSGKDPTKVDRS AY  R  AK+IVA+GLA +C
Sbjct:  143 TETYMPLAIYLSHQLAKRLSDVRKDGTLNYLRPDGKVQVTVEYDENDN----PVRIDTIVVSTQHAEDVTLEQIQEDIKAHVIYPTVPENLINEQTKFYINPTGRFVIGGPQGDAGLTGRKIIVDTYGGYARHGGGCFSGKDPTKVDRSAAYAARYVAKNIVAAGLADQC 308          
The following BLAST results are available for this feature:
BLAST of FC930974 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
METK_CLOTE1.213e-5359.04S-adenosylmethionine synthetase OS=Clostridium tet... [more]
METK_STACT2.069e-5360.95S-adenosylmethionine synthetase OS=Staphylococcus ... [more]
METK_DEIRA2.069e-5361.18S-adenosylmethionine synthetase OS=Deinococcus rad... [more]
METK_CLOPH2.069e-5361.54S-adenosylmethionine synthetase OS=Clostridium phy... [more]
METK_CHLSY2.703e-5364.29S-adenosylmethionine synthetase OS=Chloroflexus au... [more]
METK_CHLAA2.703e-5364.29S-adenosylmethionine synthetase OS=Chloroflexus au... [more]
METK_STAAW3.530e-5359.41S-adenosylmethionine synthetase OS=Staphylococcus ... [more]
METK_STAAT3.530e-5359.41S-adenosylmethionine synthetase OS=Staphylococcus ... [more]
METK_STAAS3.530e-5359.41S-adenosylmethionine synthetase OS=Staphylococcus ... [more]
METK_STAAE3.530e-5359.41S-adenosylmethionine synthetase OS=Staphylococcus ... [more]

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Properties
Property NameValue
Genbank descriptionC34100A09EF PostHarvP1 Citrus clementina cDNA clone C34100A09, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC930974 ID=FC930974; Name=FC930974; organism=Citrus clementina; type=EST; length=513bp
GGACTCCTGAGTTGATGCCTTTGAGTCATGTGCTTGCAACAAAGCTTGGT
GCTAAGCTTACAGAAGTGAGGAAGAATGGGACCTGTCCGTGGCTGAGGCC
AGATGGCAAAACACAAGTCACTGTTGAGTATTACAATGAGAATGGCGCCA
TGGTTCCTGTTCGTGTCCATACTGTGCTCATCTCAACTCAGCACGATGAG
ACTGTAACTAATGATGAGATTGCTGCAGATCTCAAGCAACATGTGATCAA
GCCTGTGATTCCTGACAAGTACTTGGATGACAAAACTATTTTCCATCTTA
ACCCATCTGGCCGTTTTGTGATTGGTGGCCCTCACGGTGATGCTGGGCTC
ACCGGCCGGAAGATTATTATTGATACTTATGGTGGCTGGNGGGCACACGG
TGGTGGGGCTTTCTCAGGGAAAGATCCTACCAAGGTTGATAGAAGCGGTG
CTTACATTGTAAGGCAAGCTGCTAAGAGTATTGTGGCAAGCGGGCTTGCC
AGGAGATGCATTG
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