FC930974

Overview
NameFC930974
Unique NameFC930974
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length513
Libraries
Library NameType
PostHarvP1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of FC930974 vs. ExPASy Swiss-Prot
Match: METK_STAAC (S-adenosylmethionine synthetase OS=Staphylococcus aureus (strain COL) GN=metK PE=3 SV=1)

HSP 1 Score: 207.223 bits (526), Expect = 3.530e-53
Identity = 101/170 (59.41%), Postives = 131/170 (77.06%), Query Frame = 3 
Query:    3 TPELMPLSHVLATKLGAKLTEVRKNGTCPWLRPDGKTQVTVEY-YNENGAMVPVRVHTVLISTQHDETVTNDEIAADLKQHVIKPVIPDKYLDDKTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTYGGWXAHGGGAFSGKDPTKVDRSGAYIVRQAAKSIVASGLARRC 509
            T   MPL+  L+ +L  +L++VRK+GT  +LRPDGK QVTVEY  N+N    PVR+ T+++STQH E VT ++I  D+K HVI P +P+  ++++T F++NP+GRFVIGGP GDAGLTGRKII+DTYGG+  HGGG FSGKDPTKVDRS AY  R  AK+IVA+GLA +C
Sbjct:  143 TETYMPLAIYLSHQLAKRLSDVRKDGTLNYLRPDGKVQVTVEYDENDN----PVRIDTIVVSTQHAEDVTLEQIQEDIKAHVIYPTVPENLINEQTKFYINPTGRFVIGGPQGDAGLTGRKIIVDTYGGYARHGGGCFSGKDPTKVDRSAAYAARYVAKNIVAAGLADQC 308
[Close]
BLAST of FC930974 vs. ExPASy Swiss-Prot
Match: METK_STAAB (S-adenosylmethionine synthetase OS=Staphylococcus aureus (strain bovine RF122 / ET3-1) GN=metK PE=3 SV=2)

HSP 1 Score: 207.223 bits (526), Expect = 3.530e-53
Identity = 101/170 (59.41%), Postives = 131/170 (77.06%), Query Frame = 3 
Query:    3 TPELMPLSHVLATKLGAKLTEVRKNGTCPWLRPDGKTQVTVEY-YNENGAMVPVRVHTVLISTQHDETVTNDEIAADLKQHVIKPVIPDKYLDDKTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTYGGWXAHGGGAFSGKDPTKVDRSGAYIVRQAAKSIVASGLARRC 509
            T   MPL+  L+ +L  +L++VRK+GT  +LRPDGK QVTVEY  N+N    PVR+ T+++STQH E VT ++I  D+K HVI P +P+  ++++T F++NP+GRFVIGGP GDAGLTGRKII+DTYGG+  HGGG FSGKDPTKVDRS AY  R  AK+IVA+GLA +C
Sbjct:  143 TETYMPLAIYLSHQLAKRLSDVRKDGTLNYLRPDGKVQVTVEYDENDN----PVRIDTIVVSTQHAEDVTLEQIQEDIKAHVIYPTVPENLINEQTKFYINPTGRFVIGGPQGDAGLTGRKIIVDTYGGYARHGGGCFSGKDPTKVDRSAAYAARYVAKNIVAAGLADQC 308
[Close]
BLAST of FC930974 vs. ExPASy Swiss-Prot
Match: METK_STAA8 (S-adenosylmethionine synthetase OS=Staphylococcus aureus (strain NCTC 8325) GN=metK PE=3 SV=1)

HSP 1 Score: 207.223 bits (526), Expect = 3.530e-53
Identity = 101/170 (59.41%), Postives = 131/170 (77.06%), Query Frame = 3 
Query:    3 TPELMPLSHVLATKLGAKLTEVRKNGTCPWLRPDGKTQVTVEY-YNENGAMVPVRVHTVLISTQHDETVTNDEIAADLKQHVIKPVIPDKYLDDKTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTYGGWXAHGGGAFSGKDPTKVDRSGAYIVRQAAKSIVASGLARRC 509
            T   MPL+  L+ +L  +L++VRK+GT  +LRPDGK QVTVEY  N+N    PVR+ T+++STQH E VT ++I  D+K HVI P +P+  ++++T F++NP+GRFVIGGP GDAGLTGRKII+DTYGG+  HGGG FSGKDPTKVDRS AY  R  AK+IVA+GLA +C
Sbjct:  143 TETYMPLAIYLSHQLAKRLSDVRKDGTLNYLRPDGKVQVTVEYDENDN----PVRIDTIVVSTQHAEDVTLEQIQEDIKAHVIYPTVPENLINEQTKFYINPTGRFVIGGPQGDAGLTGRKIIVDTYGGYARHGGGCFSGKDPTKVDRSAAYAARYVAKNIVAAGLADQC 308
[Close]
BLAST of FC930974 vs. ExPASy Swiss-Prot
Match: METK_STAA3 (S-adenosylmethionine synthetase OS=Staphylococcus aureus (strain USA300) GN=metK PE=3 SV=1)

HSP 1 Score: 207.223 bits (526), Expect = 3.530e-53
Identity = 101/170 (59.41%), Postives = 131/170 (77.06%), Query Frame = 3 
Query:    3 TPELMPLSHVLATKLGAKLTEVRKNGTCPWLRPDGKTQVTVEY-YNENGAMVPVRVHTVLISTQHDETVTNDEIAADLKQHVIKPVIPDKYLDDKTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTYGGWXAHGGGAFSGKDPTKVDRSGAYIVRQAAKSIVASGLARRC 509
            T   MPL+  L+ +L  +L++VRK+GT  +LRPDGK QVTVEY  N+N    PVR+ T+++STQH E VT ++I  D+K HVI P +P+  ++++T F++NP+GRFVIGGP GDAGLTGRKII+DTYGG+  HGGG FSGKDPTKVDRS AY  R  AK+IVA+GLA +C
Sbjct:  143 TETYMPLAIYLSHQLAKRLSDVRKDGTLNYLRPDGKVQVTVEYDENDN----PVRIDTIVVSTQHAEDVTLEQIQEDIKAHVIYPTVPENLINEQTKFYINPTGRFVIGGPQGDAGLTGRKIIVDTYGGYARHGGGCFSGKDPTKVDRSAAYAARYVAKNIVAAGLADQC 308
[Close]
BLAST of FC930974 vs. ExPASy Swiss-Prot
Match: METK_BACSU (S-adenosylmethionine synthetase OS=Bacillus subtilis GN=metK PE=3 SV=2)

HSP 1 Score: 207.223 bits (526), Expect = 3.530e-53
Identity = 102/169 (60.36%), Postives = 127/169 (75.15%), Query Frame = 3 
Query:    3 TPELMPLSHVLATKLGAKLTEVRKNGTCPWLRPDGKTQVTVEYYNENGAMVPVRVHTVLISTQHDETVTNDEIAADLKQHVIKPVIPDKYLDDKTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTYGGWXAHGGGAFSGKDPTKVDRSGAYIVRQAAKSIVASGLARRC 509
            T ELMPL   LA KL  +L+EVRK    P+LRPDGKTQVTVEY   N    PVR+  ++ISTQH   +T ++I  ++K+HVI PV+P++ +D++T + +NP+GRFVIGGP GDAGLTGRKII+DTYGG+  HGGGAFSGKD TKVDRS AY  R  AK+IVA+ LA  C
Sbjct:  144 TKELMPLPISLAHKLARRLSEVRKEDILPYLRPDGKTQVTVEYDENNK---PVRIDAIVISTQHHPEITLEQIQRNIKEHVINPVVPEELIDEETKYFINPTGRFVIGGPQGDAGLTGRKIIVDTYGGYARHGGGAFSGKDATKVDRSAAYAARYVAKNIVAAELADSC 309
[Close]
BLAST of FC930974 vs. ExPASy Swiss-Prot
Match: METK_SYNWW (S-adenosylmethionine synthetase OS=Syntrophomonas wolfei subsp. wolfei (strain Goettingen) GN=metK PE=3 SV=1)

HSP 1 Score: 206.838 bits (525), Expect = 4.610e-53
Identity = 103/169 (60.95%), Postives = 128/169 (75.74%), Query Frame = 3 
Query:    3 TPELMPLSHVLATKLGAKLTEVRKNGTCPWLRPDGKTQVTVEYYNENGAMVPVRVHTVLISTQHDETVTNDEIAADLKQHVIKPVIPDKYLDDKTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTYGGWXAHGGGAFSGKDPTKVDRSGAYIVRQAAKSIVASGLARRC 509
            T  LMP+   LA+K+  +L EVRK G  P+LRPDGKTQVTVEY +      P+RV TV++S QH   V++  I  D+ +HVIK VIP + +D  TIF++NP+GRFVIGGP GD+GLTGRKII+DTYGG   HGGGAFSGKDPTKVDRS +Y++R  AK+IVA+GLA RC
Sbjct:  142 TAVLMPMPIYLASKMAERLGEVRKEGIIPYLRPDGKTQVTVEYEDYK----PLRVTTVVVSAQHHPEVSSATIEKDIIEHVIKAVIPPEMIDAHTIFYVNPTGRFVIGGPQGDSGLTGRKIIVDTYGGMARHGGGAFSGKDPTKVDRSASYMLRYVAKNIVAAGLAERC 306
[Close]
BLAST of FC930974 vs. ExPASy Swiss-Prot
Match: METK_STRT1 (S-adenosylmethionine synthetase OS=Streptococcus thermophilus (strain CNRZ 1066) GN=metK PE=3 SV=2)

HSP 1 Score: 206.838 bits (525), Expect = 4.610e-53
Identity = 107/168 (63.69%), Postives = 129/168 (76.79%), Query Frame = 3 
Query:    3 TPELMPLSHVLATKLGAKLTEVRKNGTCPWLRPDGKTQVTVEYYNENGAMVPVRVHTVLISTQHDETVTNDEIAADLKQHVIKPVIPDKYLDDKTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTYGGWXAHGGGAFSGKDPTKVDRSGAYIVRQAAKSIVASGLARR 506
            TPE MPL   L+ KL  KL ++RK+G   +LRPD K+QVTVEY +EN    PVRV TV+ISTQHD   TND+I  D+ + VIK VIP +YLD+ T F +NP+GRFVIGGP GD+GLTGRKII+DTYGG+  HGGGAFSGKD TKVDRS +Y  R  AK+IVA+GLAR+
Sbjct:  142 TPEFMPLPVSLSHKLVKKLADLRKSGEISYLRPDAKSQVTVEY-DENDQ--PVRVDTVVISTQHDPEATNDQIRHDVIEKVIKAVIPAEYLDEDTKFFINPTGRFVIGGPQGDSGLTGRKIIVDTYGGYSRHGGGAFSGKDATKVDRSASYAARYIAKNIVAAGLARK 306
[Close]
BLAST of FC930974 vs. ExPASy Swiss-Prot
Match: METK_STRR6 (S-adenosylmethionine synthetase OS=Streptococcus pneumoniae (strain ATCC BAA-255 / R6) GN=metK PE=3 SV=1)

HSP 1 Score: 206.838 bits (525), Expect = 4.610e-53
Identity = 107/168 (63.69%), Postives = 128/168 (76.19%), Query Frame = 3 
Query:    3 TPELMPLSHVLATKLGAKLTEVRKNGTCPWLRPDGKTQVTVEYYNENGAMVPVRVHTVLISTQHDETVTNDEIAADLKQHVIKPVIPDKYLDDKTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTYGGWXAHGGGAFSGKDPTKVDRSGAYIVRQAAKSIVASGLARR 506
            T ELMPL   L+ KL  +L E+RK+G   +LRPD K+QVTVEY +EN    PVRV TV+ISTQHD   TN++I  D+   VIK VIP  YLDDKT F +NP+GRFVIGGP GD+GLTGRKII+DTYGG+  HGGGAFSGKD TKVDRS +Y  R  AK+IVA+GLA++
Sbjct:  142 TEELMPLPIALSHKLVRRLAELRKSGEISYLRPDAKSQVTVEY-DENDR--PVRVDTVVISTQHDPEATNEQIHQDVIDKVIKEVIPSSYLDDKTKFFINPTGRFVIGGPQGDSGLTGRKIIVDTYGGYSRHGGGAFSGKDATKVDRSASYAARYIAKNIVAAGLAKK 306
[Close]
BLAST of FC930974 vs. ExPASy Swiss-Prot
Match: METK_STRPS (S-adenosylmethionine synthetase OS=Streptococcus pneumoniae (strain CGSP14) GN=metK PE=3 SV=1)

HSP 1 Score: 206.838 bits (525), Expect = 4.610e-53
Identity = 107/168 (63.69%), Postives = 128/168 (76.19%), Query Frame = 3 
Query:    3 TPELMPLSHVLATKLGAKLTEVRKNGTCPWLRPDGKTQVTVEYYNENGAMVPVRVHTVLISTQHDETVTNDEIAADLKQHVIKPVIPDKYLDDKTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTYGGWXAHGGGAFSGKDPTKVDRSGAYIVRQAAKSIVASGLARR 506
            T ELMPL   L+ KL  +L E+RK+G   +LRPD K+QVTVEY +EN    PVRV TV+ISTQHD   TN++I  D+   VIK VIP  YLDDKT F +NP+GRFVIGGP GD+GLTGRKII+DTYGG+  HGGGAFSGKD TKVDRS +Y  R  AK+IVA+GLA++
Sbjct:  142 TEELMPLPIALSHKLVRRLAELRKSGEISYLRPDAKSQVTVEY-DENDR--PVRVDTVVISTQHDPEATNEQIHQDVIDKVIKEVIPSSYLDDKTKFFINPTGRFVIGGPQGDSGLTGRKIIVDTYGGYSRHGGGAFSGKDATKVDRSASYAARYIAKNIVAAGLAKK 306
[Close]
BLAST of FC930974 vs. ExPASy Swiss-Prot
Match: METK_STRPJ (S-adenosylmethionine synthetase OS=Streptococcus pneumoniae (strain ATCC 700669 / Spain 23F-1) GN=metK PE=3 SV=1)

HSP 1 Score: 206.838 bits (525), Expect = 4.610e-53
Identity = 107/168 (63.69%), Postives = 128/168 (76.19%), Query Frame = 3 
Query:    3 TPELMPLSHVLATKLGAKLTEVRKNGTCPWLRPDGKTQVTVEYYNENGAMVPVRVHTVLISTQHDETVTNDEIAADLKQHVIKPVIPDKYLDDKTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTYGGWXAHGGGAFSGKDPTKVDRSGAYIVRQAAKSIVASGLARR 506
            T ELMPL   L+ KL  +L E+RK+G   +LRPD K+QVTVEY +EN    PVRV TV+ISTQHD   TN++I  D+   VIK VIP  YLDDKT F +NP+GRFVIGGP GD+GLTGRKII+DTYGG+  HGGGAFSGKD TKVDRS +Y  R  AK+IVA+GLA++
Sbjct:  142 TEELMPLPIALSHKLVRRLAELRKSGEISYLRPDAKSQVTVEY-DENDR--PVRVDTVVISTQHDPEATNEQIHQDVINKVIKEVIPSSYLDDKTKFFINPTGRFVIGGPQGDSGLTGRKIIVDTYGGYSRHGGGAFSGKDATKVDRSASYAARYIAKNIVAAGLAKK 306
The following BLAST results are available for this feature:
BLAST of FC930974 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
METK_STAAC3.530e-5359.41S-adenosylmethionine synthetase OS=Staphylococcus ... [more]
METK_STAAB3.530e-5359.41S-adenosylmethionine synthetase OS=Staphylococcus ... [more]
METK_STAA83.530e-5359.41S-adenosylmethionine synthetase OS=Staphylococcus ... [more]
METK_STAA33.530e-5359.41S-adenosylmethionine synthetase OS=Staphylococcus ... [more]
METK_BACSU3.530e-5360.36S-adenosylmethionine synthetase OS=Bacillus subtil... [more]
METK_SYNWW4.610e-5360.95S-adenosylmethionine synthetase OS=Syntrophomonas ... [more]
METK_STRT14.610e-5363.69S-adenosylmethionine synthetase OS=Streptococcus t... [more]
METK_STRR64.610e-5363.69S-adenosylmethionine synthetase OS=Streptococcus p... [more]
METK_STRPS4.610e-5363.69S-adenosylmethionine synthetase OS=Streptococcus p... [more]
METK_STRPJ4.610e-5363.69S-adenosylmethionine synthetase OS=Streptococcus p... [more]

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Properties
Property NameValue
Genbank descriptionC34100A09EF PostHarvP1 Citrus clementina cDNA clone C34100A09, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC930974 ID=FC930974; Name=FC930974; organism=Citrus clementina; type=EST; length=513bp
GGACTCCTGAGTTGATGCCTTTGAGTCATGTGCTTGCAACAAAGCTTGGT
GCTAAGCTTACAGAAGTGAGGAAGAATGGGACCTGTCCGTGGCTGAGGCC
AGATGGCAAAACACAAGTCACTGTTGAGTATTACAATGAGAATGGCGCCA
TGGTTCCTGTTCGTGTCCATACTGTGCTCATCTCAACTCAGCACGATGAG
ACTGTAACTAATGATGAGATTGCTGCAGATCTCAAGCAACATGTGATCAA
GCCTGTGATTCCTGACAAGTACTTGGATGACAAAACTATTTTCCATCTTA
ACCCATCTGGCCGTTTTGTGATTGGTGGCCCTCACGGTGATGCTGGGCTC
ACCGGCCGGAAGATTATTATTGATACTTATGGTGGCTGGNGGGCACACGG
TGGTGGGGCTTTCTCAGGGAAAGATCCTACCAAGGTTGATAGAAGCGGTG
CTTACATTGTAAGGCAAGCTGCTAAGAGTATTGTGGCAAGCGGGCTTGCC
AGGAGATGCATTG
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