FC930974

Overview
NameFC930974
Unique NameFC930974
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length513
Libraries
Library NameType
PostHarvP1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC930974 vs. ExPASy Swiss-Prot
Match: METK_STRPI (S-adenosylmethionine synthetase OS=Streptococcus pneumoniae (strain Hungary19A-6) GN=metK PE=3 SV=1)

HSP 1 Score: 206.838 bits (525), Expect = 4.610e-53
Identity = 107/168 (63.69%), Postives = 128/168 (76.19%), Query Frame = 3
Query:    3 TPELMPLSHVLATKLGAKLTEVRKNGTCPWLRPDGKTQVTVEYYNENGAMVPVRVHTVLISTQHDETVTNDEIAADLKQHVIKPVIPDKYLDDKTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTYGGWXAHGGGAFSGKDPTKVDRSGAYIVRQAAKSIVASGLARR 506
            T ELMPL   L+ KL  +L E+RK+G   +LRPD K+QVTVEY +EN    PVRV TV+ISTQHD   TN++I  D+   VIK VIP  YLDDKT F +NP+GRFVIGGP GD+GLTGRKII+DTYGG+  HGGGAFSGKD TKVDRS +Y  R  AK+IVA+GLA++
Sbjct:  142 TEELMPLPIALSHKLVRRLAELRKSGEISYLRPDAKSQVTVEY-DENDR--PVRVDTVVISTQHDPEATNEQIHQDVIDKVIKEVIPSSYLDDKTKFFINPTGRFVIGGPQGDSGLTGRKIIVDTYGGYSRHGGGAFSGKDATKVDRSASYAARYIAKNIVAAGLAKK 306          
BLAST of FC930974 vs. ExPASy Swiss-Prot
Match: METK_STRP4 (S-adenosylmethionine synthetase OS=Streptococcus pneumoniae serotype 19F (strain G54) GN=metK PE=3 SV=1)

HSP 1 Score: 206.838 bits (525), Expect = 4.610e-53
Identity = 107/168 (63.69%), Postives = 128/168 (76.19%), Query Frame = 3
Query:    3 TPELMPLSHVLATKLGAKLTEVRKNGTCPWLRPDGKTQVTVEYYNENGAMVPVRVHTVLISTQHDETVTNDEIAADLKQHVIKPVIPDKYLDDKTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTYGGWXAHGGGAFSGKDPTKVDRSGAYIVRQAAKSIVASGLARR 506
            T ELMPL   L+ KL  +L E+RK+G   +LRPD K+QVTVEY +EN    PVRV TV+ISTQHD   TN++I  D+   VIK VIP  YLDDKT F +NP+GRFVIGGP GD+GLTGRKII+DTYGG+  HGGGAFSGKD TKVDRS +Y  R  AK+IVA+GLA++
Sbjct:  142 TEELMPLPIALSHKLVRRLAELRKSGEISYLRPDAKSQVTVEY-DENDR--PVRVDTVVISTQHDPEATNEQIHQDVIDKVIKEVIPSSYLDDKTKFFINPTGRFVIGGPQGDSGLTGRKIIVDTYGGYSRHGGGAFSGKDATKVDRSASYAARYIAKNIVAAGLAKK 306          
BLAST of FC930974 vs. ExPASy Swiss-Prot
Match: METK_STRP2 (S-adenosylmethionine synthetase OS=Streptococcus pneumoniae serotype 2 (strain D39 / NCTC 7466) GN=metK PE=3 SV=1)

HSP 1 Score: 206.838 bits (525), Expect = 4.610e-53
Identity = 107/168 (63.69%), Postives = 128/168 (76.19%), Query Frame = 3
Query:    3 TPELMPLSHVLATKLGAKLTEVRKNGTCPWLRPDGKTQVTVEYYNENGAMVPVRVHTVLISTQHDETVTNDEIAADLKQHVIKPVIPDKYLDDKTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTYGGWXAHGGGAFSGKDPTKVDRSGAYIVRQAAKSIVASGLARR 506
            T ELMPL   L+ KL  +L E+RK+G   +LRPD K+QVTVEY +EN    PVRV TV+ISTQHD   TN++I  D+   VIK VIP  YLDDKT F +NP+GRFVIGGP GD+GLTGRKII+DTYGG+  HGGGAFSGKD TKVDRS +Y  R  AK+IVA+GLA++
Sbjct:  142 TEELMPLPIALSHKLVRRLAELRKSGEISYLRPDAKSQVTVEY-DENDR--PVRVDTVVISTQHDPEATNEQIHQDVIDKVIKEVIPSSYLDDKTKFFINPTGRFVIGGPQGDSGLTGRKIIVDTYGGYSRHGGGAFSGKDATKVDRSASYAARYIAKNIVAAGLAKK 306          
BLAST of FC930974 vs. ExPASy Swiss-Prot
Match: METK_DEIGD (S-adenosylmethionine synthetase OS=Deinococcus geothermalis (strain DSM 11300) GN=metK PE=3 SV=1)

HSP 1 Score: 206.838 bits (525), Expect = 4.610e-53
Identity = 103/170 (60.59%), Postives = 124/170 (72.94%), Query Frame = 3
Query:    3 TPELMPLSHVLATKLGAKLTEVRKNGTCPWLRPDGKTQVTVEYYNENGAMVPVRVHTVLISTQHDETVTNDEIAADLKQHVIKPVIPDKYLDDKTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTYGGWXAHGGGAFSGKDPTKVDRSGAYIVRQAAKSIVASGLARRCI 512
            TPELMPL   LA +L  +L E+RK+G  P+LRPD K QVTV    E        V T++ISTQH E V+ ++I AD+ +HV++ VIP + L  +T F +NPSGRFVIGGPHGD GLTGRKII+DTYGG   HGGGAFSGKDPTKVDRS AY  R  AK+IVA+GLARR +
Sbjct:  147 TPELMPLPISLAHRLTRRLAELRKSGALPYLRPDAKAQVTVVRNGEPHEATETHVDTIVISTQHSEDVSQEQIEADMLEHVVRAVIPHELLTPETKFFINPSGRFVIGGPHGDTGLTGRKIIVDTYGGAVPHGGGAFSGKDPTKVDRSAAYYARYIAKNIVAAGLARRAL 316          
BLAST of FC930974 vs. ExPASy Swiss-Prot
Match: METK_ALKOO (S-adenosylmethionine synthetase OS=Alkaliphilus oremlandii (strain OhILAs) GN=metK PE=3 SV=1)

HSP 1 Score: 206.453 bits (524), Expect = 6.021e-53
Identity = 103/169 (60.95%), Postives = 127/169 (75.15%), Query Frame = 3
Query:    3 TPELMPLSHVLATKLGAKLTEVRKNGTCPWLRPDGKTQVTVEYYNENGAMVPVRVHTVLISTQHDETVTNDEIAADLKQHVIKPVIPDKYLDDKTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTYGGWXAHGGGAFSGKDPTKVDRSGAYIVRQAAKSIVASGLARRC 509
            TPELMPL   LA KL  +L++VRK+GT  +LRPDGKTQVTVEY  +     PVRV T++ISTQH   V    I  D+ +HV++ ++P + LD+ T + +NP+GRFVIGGP GDAGLTGRKII+DTYGG+  HGGGAFSGKD TKVDRS AY  R  AK+IVA+GLA +C
Sbjct:  141 TPELMPLPISLAHKLAKRLSDVRKDGTIGYLRPDGKTQVTVEYDGDK----PVRVDTIVISTQHGPEVDAATIEKDMIEHVVQKIVPAELLDENTRYFINPTGRFVIGGPQGDAGLTGRKIIVDTYGGYARHGGGAFSGKDATKVDRSAAYAARYVAKNIVAAGLADKC 305          
BLAST of FC930974 vs. ExPASy Swiss-Prot
Match: METK_STRT2 (S-adenosylmethionine synthetase OS=Streptococcus thermophilus (strain ATCC BAA-250 / LMG 18311) GN=metK PE=3 SV=2)

HSP 1 Score: 206.068 bits (523), Expect = 7.864e-53
Identity = 106/168 (63.10%), Postives = 129/168 (76.79%), Query Frame = 3
Query:    3 TPELMPLSHVLATKLGAKLTEVRKNGTCPWLRPDGKTQVTVEYYNENGAMVPVRVHTVLISTQHDETVTNDEIAADLKQHVIKPVIPDKYLDDKTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTYGGWXAHGGGAFSGKDPTKVDRSGAYIVRQAAKSIVASGLARR 506
            TPE MPL   L+ KL  KL ++RK+G   +LRPD K+QVTVEY +EN    PVRV TV+ISTQHD   TND+I  D+ + VIK VIP +YLD+ T F +NP+GRFVIGGP GD+GLTGRKII+DTYGG+  HGGGAFSGKD TKVDRS +Y  R  AK+IVA+GLA++
Sbjct:  142 TPEFMPLPVSLSHKLVKKLADLRKSGEISYLRPDAKSQVTVEY-DENDQ--PVRVDTVVISTQHDPEATNDQIRQDVIEKVIKAVIPAEYLDEDTKFFINPTGRFVIGGPQGDSGLTGRKIIVDTYGGYSRHGGGAFSGKDATKVDRSASYAARYIAKNIVAAGLAKK 306          
BLAST of FC930974 vs. ExPASy Swiss-Prot
Match: METK_STRA3 (S-adenosylmethionine synthetase OS=Streptococcus agalactiae serotype III GN=metK PE=3 SV=1)

HSP 1 Score: 206.068 bits (523), Expect = 7.864e-53
Identity = 104/168 (61.90%), Postives = 127/168 (75.60%), Query Frame = 3
Query:    3 TPELMPLSHVLATKLGAKLTEVRKNGTCPWLRPDGKTQVTVEYYNENGAMVPVRVHTVLISTQHDETVTNDEIAADLKQHVIKPVIPDKYLDDKTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTYGGWXAHGGGAFSGKDPTKVDRSGAYIVRQAAKSIVASGLARR 506
            TPELMPL   LA +L  KLT++RK+G   +LRPD K+QVTVEY   N    P+RV  V+ISTQHD  VTND++  D+ + VI  VIP  YLDD+T F +NP+GRFVIGGP GD+GLTGRKII+DTYGG+  HGGGAFSGKD TKVDRS +Y  R  AK+IVA+ LA++
Sbjct:  142 TPELMPLPISLAHQLVKKLTDLRKSGELTYLRPDAKSQVTVEYDENNQ---PIRVDAVVISTQHDPNVTNDQLHKDVIEKVINEVIPSHYLDDQTKFFINPTGRFVIGGPQGDSGLTGRKIIVDTYGGYSRHGGGAFSGKDATKVDRSASYAARYIAKNIVAADLAKK 306          
BLAST of FC930974 vs. ExPASy Swiss-Prot
Match: METK_STAAR (S-adenosylmethionine synthetase OS=Staphylococcus aureus (strain MRSA252) GN=metK PE=3 SV=1)

HSP 1 Score: 206.068 bits (523), Expect = 7.864e-53
Identity = 100/170 (58.82%), Postives = 131/170 (77.06%), Query Frame = 3
Query:    3 TPELMPLSHVLATKLGAKLTEVRKNGTCPWLRPDGKTQVTVEY-YNENGAMVPVRVHTVLISTQHDETVTNDEIAADLKQHVIKPVIPDKYLDDKTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTYGGWXAHGGGAFSGKDPTKVDRSGAYIVRQAAKSIVASGLARRC 509
            T   MPL+  L+ +L  +L++VRK+GT  +LRPDGK QVTVEY  N+N    PVR+ T+++STQH + VT ++I  D+K HVI P +P+  ++++T F++NP+GRFVIGGP GDAGLTGRKII+DTYGG+  HGGG FSGKDPTKVDRS AY  R  AK+IVA+GLA +C
Sbjct:  143 TETYMPLAIYLSHQLAKRLSDVRKDGTLNYLRPDGKVQVTVEYDENDN----PVRIDTIVVSTQHADDVTLEQIQEDIKAHVIYPTVPENLINEQTKFYINPTGRFVIGGPQGDAGLTGRKIIVDTYGGYARHGGGCFSGKDPTKVDRSAAYAARYVAKNIVAAGLADQC 308          
BLAST of FC930974 vs. ExPASy Swiss-Prot
Match: METK_STAAN (S-adenosylmethionine synthetase OS=Staphylococcus aureus (strain N315) GN=metK PE=1 SV=1)

HSP 1 Score: 206.068 bits (523), Expect = 7.864e-53
Identity = 100/170 (58.82%), Postives = 131/170 (77.06%), Query Frame = 3
Query:    3 TPELMPLSHVLATKLGAKLTEVRKNGTCPWLRPDGKTQVTVEY-YNENGAMVPVRVHTVLISTQHDETVTNDEIAADLKQHVIKPVIPDKYLDDKTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTYGGWXAHGGGAFSGKDPTKVDRSGAYIVRQAAKSIVASGLARRC 509
            T   MPL+  L+ +L  +L++VRK+GT  +LRPDGK QVTVEY  N+N    PVR+ T+++STQH + VT ++I  D+K HVI P +P+  ++++T F++NP+GRFVIGGP GDAGLTGRKII+DTYGG+  HGGG FSGKDPTKVDRS AY  R  AK+IVA+GLA +C
Sbjct:  143 TETYMPLAIYLSHQLAKRLSDVRKDGTLNYLRPDGKVQVTVEYDENDN----PVRIDTIVVSTQHADDVTLEQIQEDIKAHVIYPTVPENLINEQTKFYINPTGRFVIGGPQGDAGLTGRKIIVDTYGGYARHGGGCFSGKDPTKVDRSAAYAARYVAKNIVAAGLADQC 308          
BLAST of FC930974 vs. ExPASy Swiss-Prot
Match: METK_STAAM (S-adenosylmethionine synthetase OS=Staphylococcus aureus (strain Mu50 / ATCC 700699) GN=metK PE=1 SV=1)

HSP 1 Score: 206.068 bits (523), Expect = 7.864e-53
Identity = 100/170 (58.82%), Postives = 131/170 (77.06%), Query Frame = 3
Query:    3 TPELMPLSHVLATKLGAKLTEVRKNGTCPWLRPDGKTQVTVEY-YNENGAMVPVRVHTVLISTQHDETVTNDEIAADLKQHVIKPVIPDKYLDDKTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTYGGWXAHGGGAFSGKDPTKVDRSGAYIVRQAAKSIVASGLARRC 509
            T   MPL+  L+ +L  +L++VRK+GT  +LRPDGK QVTVEY  N+N    PVR+ T+++STQH + VT ++I  D+K HVI P +P+  ++++T F++NP+GRFVIGGP GDAGLTGRKII+DTYGG+  HGGG FSGKDPTKVDRS AY  R  AK+IVA+GLA +C
Sbjct:  143 TETYMPLAIYLSHQLAKRLSDVRKDGTLNYLRPDGKVQVTVEYDENDN----PVRIDTIVVSTQHADDVTLEQIQEDIKAHVIYPTVPENLINEQTKFYINPTGRFVIGGPQGDAGLTGRKIIVDTYGGYARHGGGCFSGKDPTKVDRSAAYAARYVAKNIVAAGLADQC 308          
The following BLAST results are available for this feature:
BLAST of FC930974 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
METK_STRPI4.610e-5363.69S-adenosylmethionine synthetase OS=Streptococcus p... [more]
METK_STRP44.610e-5363.69S-adenosylmethionine synthetase OS=Streptococcus p... [more]
METK_STRP24.610e-5363.69S-adenosylmethionine synthetase OS=Streptococcus p... [more]
METK_DEIGD4.610e-5360.59S-adenosylmethionine synthetase OS=Deinococcus geo... [more]
METK_ALKOO6.021e-5360.95S-adenosylmethionine synthetase OS=Alkaliphilus or... [more]
METK_STRT27.864e-5363.10S-adenosylmethionine synthetase OS=Streptococcus t... [more]
METK_STRA37.864e-5361.90S-adenosylmethionine synthetase OS=Streptococcus a... [more]
METK_STAAR7.864e-5358.82S-adenosylmethionine synthetase OS=Staphylococcus ... [more]
METK_STAAN7.864e-5358.82S-adenosylmethionine synthetase OS=Staphylococcus ... [more]
METK_STAAM7.864e-5358.82S-adenosylmethionine synthetase OS=Staphylococcus ... [more]

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Properties
Property NameValue
Genbank descriptionC34100A09EF PostHarvP1 Citrus clementina cDNA clone C34100A09, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC930974 ID=FC930974; Name=FC930974; organism=Citrus clementina; type=EST; length=513bp
GGACTCCTGAGTTGATGCCTTTGAGTCATGTGCTTGCAACAAAGCTTGGT
GCTAAGCTTACAGAAGTGAGGAAGAATGGGACCTGTCCGTGGCTGAGGCC
AGATGGCAAAACACAAGTCACTGTTGAGTATTACAATGAGAATGGCGCCA
TGGTTCCTGTTCGTGTCCATACTGTGCTCATCTCAACTCAGCACGATGAG
ACTGTAACTAATGATGAGATTGCTGCAGATCTCAAGCAACATGTGATCAA
GCCTGTGATTCCTGACAAGTACTTGGATGACAAAACTATTTTCCATCTTA
ACCCATCTGGCCGTTTTGTGATTGGTGGCCCTCACGGTGATGCTGGGCTC
ACCGGCCGGAAGATTATTATTGATACTTATGGTGGCTGGNGGGCACACGG
TGGTGGGGCTTTCTCAGGGAAAGATCCTACCAAGGTTGATAGAAGCGGTG
CTTACATTGTAAGGCAAGCTGCTAAGAGTATTGTGGCAAGCGGGCTTGCC
AGGAGATGCATTG
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