FC930974

Overview
NameFC930974
Unique NameFC930974
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length513
Libraries
Library NameType
PostHarvP1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of FC930974 vs. ExPASy Swiss-Prot
Match: METK_STAA9 (S-adenosylmethionine synthetase OS=Staphylococcus aureus (strain JH9) GN=metK PE=3 SV=1)

HSP 1 Score: 206.068 bits (523), Expect = 7.864e-53
Identity = 100/170 (58.82%), Postives = 131/170 (77.06%), Query Frame = 3 
Query:    3 TPELMPLSHVLATKLGAKLTEVRKNGTCPWLRPDGKTQVTVEY-YNENGAMVPVRVHTVLISTQHDETVTNDEIAADLKQHVIKPVIPDKYLDDKTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTYGGWXAHGGGAFSGKDPTKVDRSGAYIVRQAAKSIVASGLARRC 509
            T   MPL+  L+ +L  +L++VRK+GT  +LRPDGK QVTVEY  N+N    PVR+ T+++STQH + VT ++I  D+K HVI P +P+  ++++T F++NP+GRFVIGGP GDAGLTGRKII+DTYGG+  HGGG FSGKDPTKVDRS AY  R  AK+IVA+GLA +C
Sbjct:  143 TETYMPLAIYLSHQLAKRLSDVRKDGTLNYLRPDGKVQVTVEYDENDN----PVRIDTIVVSTQHADDVTLEQIQEDIKAHVIYPTVPENLINEQTKFYINPTGRFVIGGPQGDAGLTGRKIIVDTYGGYARHGGGCFSGKDPTKVDRSAAYAARYVAKNIVAAGLADQC 308
[Close]
BLAST of FC930974 vs. ExPASy Swiss-Prot
Match: METK_STAA2 (S-adenosylmethionine synthetase OS=Staphylococcus aureus (strain JH1) GN=metK PE=3 SV=1)

HSP 1 Score: 206.068 bits (523), Expect = 7.864e-53
Identity = 100/170 (58.82%), Postives = 131/170 (77.06%), Query Frame = 3 
Query:    3 TPELMPLSHVLATKLGAKLTEVRKNGTCPWLRPDGKTQVTVEY-YNENGAMVPVRVHTVLISTQHDETVTNDEIAADLKQHVIKPVIPDKYLDDKTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTYGGWXAHGGGAFSGKDPTKVDRSGAYIVRQAAKSIVASGLARRC 509
            T   MPL+  L+ +L  +L++VRK+GT  +LRPDGK QVTVEY  N+N    PVR+ T+++STQH + VT ++I  D+K HVI P +P+  ++++T F++NP+GRFVIGGP GDAGLTGRKII+DTYGG+  HGGG FSGKDPTKVDRS AY  R  AK+IVA+GLA +C
Sbjct:  143 TETYMPLAIYLSHQLAKRLSDVRKDGTLNYLRPDGKVQVTVEYDENDN----PVRIDTIVVSTQHADDVTLEQIQEDIKAHVIYPTVPENLINEQTKFYINPTGRFVIGGPQGDAGLTGRKIIVDTYGGYARHGGGCFSGKDPTKVDRSAAYAARYVAKNIVAAGLADQC 308
[Close]
BLAST of FC930974 vs. ExPASy Swiss-Prot
Match: METK_STAA1 (S-adenosylmethionine synthetase OS=Staphylococcus aureus (strain Mu3 / ATCC 700698) GN=metK PE=3 SV=1)

HSP 1 Score: 206.068 bits (523), Expect = 7.864e-53
Identity = 100/170 (58.82%), Postives = 131/170 (77.06%), Query Frame = 3 
Query:    3 TPELMPLSHVLATKLGAKLTEVRKNGTCPWLRPDGKTQVTVEY-YNENGAMVPVRVHTVLISTQHDETVTNDEIAADLKQHVIKPVIPDKYLDDKTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTYGGWXAHGGGAFSGKDPTKVDRSGAYIVRQAAKSIVASGLARRC 509
            T   MPL+  L+ +L  +L++VRK+GT  +LRPDGK QVTVEY  N+N    PVR+ T+++STQH + VT ++I  D+K HVI P +P+  ++++T F++NP+GRFVIGGP GDAGLTGRKII+DTYGG+  HGGG FSGKDPTKVDRS AY  R  AK+IVA+GLA +C
Sbjct:  143 TETYMPLAIYLSHQLAKRLSDVRKDGTLNYLRPDGKVQVTVEYDENDN----PVRIDTIVVSTQHADDVTLEQIQEDIKAHVIYPTVPENLINEQTKFYINPTGRFVIGGPQGDAGLTGRKIIVDTYGGYARHGGGCFSGKDPTKVDRSAAYAARYVAKNIVAAGLADQC 308
[Close]
BLAST of FC930974 vs. ExPASy Swiss-Prot
Match: METK_DEIDV (S-adenosylmethionine synthetase OS=Deinococcus deserti (strain VCD115 / DSM 17065 / LMG 22923) GN=metK PE=3 SV=1)

HSP 1 Score: 206.068 bits (523), Expect = 7.864e-53
Identity = 105/170 (61.76%), Postives = 124/170 (72.94%), Query Frame = 3 
Query:    3 TPELMPLSHVLATKLGAKLTEVRKNGTCPWLRPDGKTQVTVEYYNENGAMVPVRVHTVLISTQHDETVTNDEIAADLKQHVIKPVIPDKYLDDKTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTYGGWXAHGGGAFSGKDPTKVDRSGAYIVRQAAKSIVASGLARRCI 512
            TPELMPL   LA +L  +L E+RKNGT P+LRPD K QVTV    +        V T++ISTQH E VT ++I  D+ +HVI+ VIP +YL   T + +NPSGRFVIGGPHGD GLTGRKII+DTYGG   HGGGAFSGKDPTKVDRS AY  R  AK+IVA+GLARR +
Sbjct:  147 TPELMPLPISLAHQLTRRLAELRKNGTLPYLRPDAKAQVTVVRDGDVHDASETLVDTIVISTQHGEDVTQEQIRQDMLKHVIQAVIPAEYLTPDTKYFINPSGRFVIGGPHGDTGLTGRKIIVDTYGGAVPHGGGAFSGKDPTKVDRSAAYYARYIAKNIVAAGLARRAL 316
[Close]
BLAST of FC930974 vs. ExPASy Swiss-Prot
Match: METK_STRSY (S-adenosylmethionine synthetase OS=Streptococcus suis (strain 05ZYH33) GN=metK PE=3 SV=1)

HSP 1 Score: 205.682 bits (522), Expect = 1.027e-52
Identity = 103/168 (61.31%), Postives = 129/168 (76.79%), Query Frame = 3 
Query:    3 TPELMPLSHVLATKLGAKLTEVRKNGTCPWLRPDGKTQVTVEYYNENGAMVPVRVHTVLISTQHDETVTNDEIAADLKQHVIKPVIPDKYLDDKTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTYGGWXAHGGGAFSGKDPTKVDRSGAYIVRQAAKSIVASGLARR 506
            TPELMPL   L+ KL  +L E+RK+G   +LRPD K+QVTVEY  +N    PVRV TV+ISTQHD  V+ ++I  D+ + VIK +IP  YLDD+T + +NP+GRFVIGGP GD+GLTGRKII+DTYGG+  HGGGAFSGKD TKVDRS +Y  R  AK+IVA+GLA++
Sbjct:  142 TPELMPLPISLSHKLVRRLAELRKSGEIAYLRPDAKSQVTVEYDEDNQ---PVRVDTVVISTQHDPEVSQEQIRQDVIERVIKEIIPAHYLDDQTNYFINPTGRFVIGGPQGDSGLTGRKIIVDTYGGYSRHGGGAFSGKDATKVDRSASYAARYIAKNIVAAGLAKK 306
[Close]
BLAST of FC930974 vs. ExPASy Swiss-Prot
Match: METK_STRS2 (S-adenosylmethionine synthetase OS=Streptococcus suis (strain 98HAH33) GN=metK PE=3 SV=1)

HSP 1 Score: 205.682 bits (522), Expect = 1.027e-52
Identity = 103/168 (61.31%), Postives = 129/168 (76.79%), Query Frame = 3 
Query:    3 TPELMPLSHVLATKLGAKLTEVRKNGTCPWLRPDGKTQVTVEYYNENGAMVPVRVHTVLISTQHDETVTNDEIAADLKQHVIKPVIPDKYLDDKTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTYGGWXAHGGGAFSGKDPTKVDRSGAYIVRQAAKSIVASGLARR 506
            TPELMPL   L+ KL  +L E+RK+G   +LRPD K+QVTVEY  +N    PVRV TV+ISTQHD  V+ ++I  D+ + VIK +IP  YLDD+T + +NP+GRFVIGGP GD+GLTGRKII+DTYGG+  HGGGAFSGKD TKVDRS +Y  R  AK+IVA+GLA++
Sbjct:  142 TPELMPLPISLSHKLVRRLAELRKSGEIAYLRPDAKSQVTVEYDEDNQ---PVRVDTVVISTQHDPEVSQEQIRQDVIERVIKEIIPAHYLDDQTNYFINPTGRFVIGGPQGDSGLTGRKIIVDTYGGYSRHGGGAFSGKDATKVDRSASYAARYIAKNIVAAGLAKK 306
[Close]
BLAST of FC930974 vs. ExPASy Swiss-Prot
Match: METK_STRP7 (S-adenosylmethionine synthetase OS=Streptococcus pneumoniae (strain 70585) GN=metK PE=3 SV=1)

HSP 1 Score: 205.682 bits (522), Expect = 1.027e-52
Identity = 107/168 (63.69%), Postives = 128/168 (76.19%), Query Frame = 3 
Query:    3 TPELMPLSHVLATKLGAKLTEVRKNGTCPWLRPDGKTQVTVEYYNENGAMVPVRVHTVLISTQHDETVTNDEIAADLKQHVIKPVIPDKYLDDKTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTYGGWXAHGGGAFSGKDPTKVDRSGAYIVRQAAKSIVASGLARR 506
            T ELMPL   L+ KL  +L E+RK+G   +LRPD K+QVTVEY +EN    PVRV TV+ISTQHD  VTN++I  D+   VIK VIP  YLDDKT F +NP+GRFVIGGP GD+GLTGRKII+DTYGG+  HGGGAFSGKD TKVDRS +Y  R  AK+IVA+ LA++
Sbjct:  142 TEELMPLPIALSHKLVRRLAELRKSGEISYLRPDAKSQVTVEY-DENDR--PVRVDTVVISTQHDPEVTNEQIHQDVIDKVIKEVIPSSYLDDKTKFFINPTGRFVIGGPQGDSGLTGRKIIVDTYGGYSRHGGGAFSGKDATKVDRSASYAARYIAKNIVAADLAKK 306
[Close]
BLAST of FC930974 vs. ExPASy Swiss-Prot
Match: METK_STRMU (S-adenosylmethionine synthetase OS=Streptococcus mutans GN=metK PE=3 SV=1)

HSP 1 Score: 205.682 bits (522), Expect = 1.027e-52
Identity = 107/168 (63.69%), Postives = 130/168 (77.38%), Query Frame = 3 
Query:    3 TPELMPLSHVLATKLGAKLTEVRKNGTCPWLRPDGKTQVTVEYYNENGAMVPVRVHTVLISTQHDETVTNDEIAADLKQHVIKPVIPDKYLDDKTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTYGGWXAHGGGAFSGKDPTKVDRSGAYIVRQAAKSIVASGLARR 506
            TPELMPL   LA +L  KL E+RK+G   +LRPD K+QVTVEY +EN    PVRV TV+ISTQHD   TN++I  D+ + VIK VIP +YLD KT + +NP+GRFVIGGP GD+GLTGRKII+DTYGG+  HGGGAFSGKD TKVDRS +Y  R  AK+IVA+GLA++
Sbjct:  142 TPELMPLPISLAHRLVRKLAELRKSGEIAYLRPDAKSQVTVEY-DENDK--PVRVDTVVISTQHDPEATNEQIHRDVIEKVIKAVIPAEYLDAKTKYLINPTGRFVIGGPQGDSGLTGRKIIVDTYGGYARHGGGAFSGKDATKVDRSASYAARYIAKNIVAAGLAKK 306
[Close]
BLAST of FC930974 vs. ExPASy Swiss-Prot
Match: METK_ROSCS (S-adenosylmethionine synthetase OS=Roseiflexus castenholzii (strain DSM 13941 / HLO8) GN=metK PE=3 SV=1)

HSP 1 Score: 205.682 bits (522), Expect = 1.027e-52
Identity = 103/168 (61.31%), Postives = 126/168 (75.00%), Query Frame = 3 
Query:    3 TPELMPLSHVLATKLGAKLTEVRKNGTCPWLRPDGKTQVTVEYYNENGAMVPVRVHTVLISTQHDETVTNDEIAADLKQHVIKPVIPDKYLDDKTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTYGGWXAHGGGAFSGKDPTKVDRSGAYIVRQAAKSIVASGLARR 506
            TPELMPL   LA ++G +L+ +RK+G  P+LRPDGK+QVT+EY        PVRV TVL+S QH   VT ++I  D+  HVI  VIP+  LD+KT + +NP+GRFVIGGP GD+GLTGRKII+DTYGG   HGGGAFSGKDPTKVDRS AY  R  AK++VA+GLA R
Sbjct:  151 TPELMPLPIALAHRIGRRLSRLRKDGVLPYLRPDGKSQVTIEYSYGR----PVRVDTVLVSNQHAPDVTQEQIRHDIIHHVIHEVIPNDLLDEKTKYFVNPTGRFVIGGPMGDSGLTGRKIIVDTYGGMARHGGGAFSGKDPTKVDRSAAYACRWVAKNVVAAGLADR 314
[Close]
BLAST of FC930974 vs. ExPASy Swiss-Prot
Match: METK_LACS1 (S-adenosylmethionine synthetase OS=Lactobacillus salivarius subsp. salivarius (strain UCC118) GN=metK PE=3 SV=1)

HSP 1 Score: 205.682 bits (522), Expect = 1.027e-52
Identity = 104/166 (62.65%), Postives = 124/166 (74.70%), Query Frame = 3 
Query:    3 TPELMPLSHVLATKLGAKLTEVRKNGTCPWLRPDGKTQVTVEYYNENGAMVPVRVHTVLISTQHDETVTNDEIAADLKQHVIKPVIPDKYLDDKTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTYGGWXAHGGGAFSGKDPTKVDRSGAYIVRQAAKSIVASGLA 500
            TPELMPL   L+  L  K+ EVRKNGT  +L PD K QVTVEY + N    P+R+ TV++STQHDE ++ D+I  D+   VI  VIPDKYLD  T + +NP+GRFVIGGP GDAGLTGRKII+DTYGG+  HGGGAFSGKD TKVDRS +Y  R  AK+IVA+GLA
Sbjct:  141 TPELMPLPISLSHHLMKKVAEVRKNGTLAYLGPDAKAQVTVEYDDNNQ---PLRIDTVVLSTQHDENISLDQIRKDVMDQVITKVIPDKYLDSNTKYFINPTGRFVIGGPQGDAGLTGRKIIVDTYGGYAHHGGGAFSGKDATKVDRSASYAARYIAKNIVAAGLA 303
The following BLAST results are available for this feature:
BLAST of FC930974 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
METK_STAA97.864e-5358.82S-adenosylmethionine synthetase OS=Staphylococcus ... [more]
METK_STAA27.864e-5358.82S-adenosylmethionine synthetase OS=Staphylococcus ... [more]
METK_STAA17.864e-5358.82S-adenosylmethionine synthetase OS=Staphylococcus ... [more]
METK_DEIDV7.864e-5361.76S-adenosylmethionine synthetase OS=Deinococcus des... [more]
METK_STRSY1.027e-5261.31S-adenosylmethionine synthetase OS=Streptococcus s... [more]
METK_STRS21.027e-5261.31S-adenosylmethionine synthetase OS=Streptococcus s... [more]
METK_STRP71.027e-5263.69S-adenosylmethionine synthetase OS=Streptococcus p... [more]
METK_STRMU1.027e-5263.69S-adenosylmethionine synthetase OS=Streptococcus m... [more]
METK_ROSCS1.027e-5261.31S-adenosylmethionine synthetase OS=Roseiflexus cas... [more]
METK_LACS11.027e-5262.65S-adenosylmethionine synthetase OS=Lactobacillus s... [more]

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Properties
Property NameValue
Genbank descriptionC34100A09EF PostHarvP1 Citrus clementina cDNA clone C34100A09, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC930974 ID=FC930974; Name=FC930974; organism=Citrus clementina; type=EST; length=513bp
GGACTCCTGAGTTGATGCCTTTGAGTCATGTGCTTGCAACAAAGCTTGGT
GCTAAGCTTACAGAAGTGAGGAAGAATGGGACCTGTCCGTGGCTGAGGCC
AGATGGCAAAACACAAGTCACTGTTGAGTATTACAATGAGAATGGCGCCA
TGGTTCCTGTTCGTGTCCATACTGTGCTCATCTCAACTCAGCACGATGAG
ACTGTAACTAATGATGAGATTGCTGCAGATCTCAAGCAACATGTGATCAA
GCCTGTGATTCCTGACAAGTACTTGGATGACAAAACTATTTTCCATCTTA
ACCCATCTGGCCGTTTTGTGATTGGTGGCCCTCACGGTGATGCTGGGCTC
ACCGGCCGGAAGATTATTATTGATACTTATGGTGGCTGGNGGGCACACGG
TGGTGGGGCTTTCTCAGGGAAAGATCCTACCAAGGTTGATAGAAGCGGTG
CTTACATTGTAAGGCAAGCTGCTAAGAGTATTGTGGCAAGCGGGCTTGCC
AGGAGATGCATTG
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