FC930974

Overview
NameFC930974
Unique NameFC930974
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length513
Libraries
Library NameType
PostHarvP1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC930974 vs. ExPASy Swiss-Prot
Match: METK_DESHD (S-adenosylmethionine synthetase OS=Desulfitobacterium hafniense (strain DCB-2 / DSM 10664) GN=metK PE=3 SV=1)

HSP 1 Score: 205.682 bits (522), Expect = 1.027e-52
Identity = 101/169 (59.76%), Postives = 124/169 (73.37%), Query Frame = 3
Query:    3 TPELMPLSHVLATKLGAKLTEVRKNGTCPWLRPDGKTQVTVEYYNENGAMVPVRVHTVLISTQHDETVTNDEIAADLKQHVIKPVIPDKYLDDKTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTYGGWXAHGGGAFSGKDPTKVDRSGAYIVRQAAKSIVASGLARRC 509
            T   MPL+  LA +L  +L+EVRK+    +LRPDGKTQVTVEY +      PVR+ T++ISTQH    T + I  DL +HV+ PV+P + LD+ T + +NP+GRFVIGGP GDAGLTGRKII+DTYGG   HGGGAFSGKDPTKVDRS AY  R  AK++VA+GLA RC
Sbjct:  142 TESYMPLAIDLAHRLARRLSEVRKSDILDYLRPDGKTQVTVEYEDNR----PVRIDTIVISTQHHPEATQERIRRDLLEHVVFPVVPSELLDESTRYFINPTGRFVIGGPQGDAGLTGRKIIVDTYGGMARHGGGAFSGKDPTKVDRSAAYAARYVAKNVVAAGLAERC 306          
BLAST of FC930974 vs. ExPASy Swiss-Prot
Match: METK_THEAB (S-adenosylmethionine synthetase OS=Thermosipho africanus (strain TCF52B) GN=metK PE=3 SV=1)

HSP 1 Score: 205.297 bits (521), Expect = 1.341e-52
Identity = 107/166 (64.46%), Postives = 125/166 (75.30%), Query Frame = 3
Query:    3 TPELMPLSHVLATKLGAKLTEVRKNGTCPWLRPDGKTQVTVEYYNENGAMVPVRVHTVLISTQHDETVTNDEIAADLKQHVIKPVIPDKYLDDKTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTYGGWXAHGGGAFSGKDPTKVDRSGAYIVRQAAKSIVASGLA 500
            T E MPL  +L+ KL  KL+EVRKNGT P+LRPDGKTQVT+EY +EN    PVRV TVLISTQH+  VT  EI   L +HVI P+IP++  DDK    +NP+GRFV+GGP  D GLTGRKII+DTYGG   HGGGAFSGKDPTKVDRS  Y  R  AK++VA+GLA
Sbjct:  142 TKEYMPLPIMLSHKLAMKLSEVRKNGTLPFLRPDGKTQVTIEY-DENDK--PVRVDTVLISTQHEPDVTISEIKEALIKHVIDPIIPEELRDDKMKILVNPTGRFVLGGPSADTGLTGRKIIVDTYGGAVPHGGGAFSGKDPTKVDRSAHYFARYVAKNVVAAGLA 304          
BLAST of FC930974 vs. ExPASy Swiss-Prot
Match: METK_STRA5 (S-adenosylmethionine synthetase OS=Streptococcus agalactiae serotype V GN=metK PE=3 SV=1)

HSP 1 Score: 205.297 bits (521), Expect = 1.341e-52
Identity = 105/168 (62.50%), Postives = 129/168 (76.79%), Query Frame = 3
Query:    3 TPELMPLSHVLATKLGAKLTEVRKNGTCPWLRPDGKTQVTVEYYNENGAMVPVRVHTVLISTQHDETVTNDEIAADLKQHVIKPVIPDKYLDDKTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTYGGWXAHGGGAFSGKDPTKVDRSGAYIVRQAAKSIVASGLARR 506
            TPELMPL   LA +L  KLT++RK+G   +LRPD K+QVTVEY +EN    P+RV  V+ISTQHD  VTND++  D+ + VI  VIP  YLDD+T F +NP+GRFVIGGP GD+GLTGRKII+DTYGG+  HGGGAFSGKD TKVDRS +Y  R  AK+IVA+ LA++
Sbjct:  142 TPELMPLPISLAHQLVKKLTDLRKSGELTYLRPDAKSQVTVEY-DENDQ--PIRVDAVVISTQHDPNVTNDQLHKDVIEKVINEVIPSHYLDDQTKFFINPTGRFVIGGPQGDSGLTGRKIIVDTYGGYSRHGGGAFSGKDATKVDRSASYAARYIAKNIVAADLAKK 306          
BLAST of FC930974 vs. ExPASy Swiss-Prot
Match: METK_STRA1 (S-adenosylmethionine synthetase OS=Streptococcus agalactiae serotype Ia GN=metK PE=3 SV=1)

HSP 1 Score: 205.297 bits (521), Expect = 1.341e-52
Identity = 105/168 (62.50%), Postives = 129/168 (76.79%), Query Frame = 3
Query:    3 TPELMPLSHVLATKLGAKLTEVRKNGTCPWLRPDGKTQVTVEYYNENGAMVPVRVHTVLISTQHDETVTNDEIAADLKQHVIKPVIPDKYLDDKTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTYGGWXAHGGGAFSGKDPTKVDRSGAYIVRQAAKSIVASGLARR 506
            TPELMPL   LA +L  KLT++RK+G   +LRPD K+QVTVEY +EN    P+RV  V+ISTQHD  VTND++  D+ + VI  VIP  YLDD+T F +NP+GRFVIGGP GD+GLTGRKII+DTYGG+  HGGGAFSGKD TKVDRS +Y  R  AK+IVA+ LA++
Sbjct:  142 TPELMPLPISLAHQLVKKLTDLRKSGELTYLRPDAKSQVTVEY-DENDQ--PIRVDAVVISTQHDPNVTNDQLHKDVIEKVINEVIPSHYLDDQTKFFINPTGRFVIGGPQGDSGLTGRKIIVDTYGGYSRHGGGAFSGKDATKVDRSASYAARYIAKNIVAADLAKK 306          
BLAST of FC930974 vs. ExPASy Swiss-Prot
Match: METK_STAAU (S-adenosylmethionine synthetase OS=Staphylococcus aureus GN=metK PE=3 SV=1)

HSP 1 Score: 205.297 bits (521), Expect = 1.341e-52
Identity = 101/170 (59.41%), Postives = 130/170 (76.47%), Query Frame = 3
Query:    3 TPELMPLSHVLATKLGAKLTEVRKNGTCPWLRPDGKTQVTVEY-YNENGAMVPVRVHTVLISTQHDETVTNDEIAADLKQHVIKPVIPDKYLDDKTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTYGGWXAHGGGAFSGKDPTKVDRSGAYIVRQAAKSIVASGLARRC 509
            T   MPL+  L+ +L  +L++VRK+GT  +LRPDGK QVTVEY  N+N    PVR+ T+++STQH E VT ++I  D+K HVI P +P+  ++++T F++NP+GRFVIGGP GDAGLTGRKII+DTYGG   HGGG FSGKDPTKVDRS AY  R  AK+IVA+GLA +C
Sbjct:  143 TETYMPLAIYLSHQLAKRLSDVRKDGTLNYLRPDGKVQVTVEYDENDN----PVRIDTIVVSTQHAEDVTLEQIQEDIKAHVIYPTVPENLINEQTKFYINPTGRFVIGGPQGDAGLTGRKIIVDTYGGIARHGGGCFSGKDPTKVDRSAAYAARYVAKNIVAAGLADQC 308          
BLAST of FC930974 vs. ExPASy Swiss-Prot
Match: METK_STRZP (S-adenosylmethionine synthetase OS=Streptococcus pneumoniae (strain P1031) GN=metK PE=3 SV=1)

HSP 1 Score: 204.912 bits (520), Expect = 1.752e-52
Identity = 106/168 (63.10%), Postives = 127/168 (75.60%), Query Frame = 3
Query:    3 TPELMPLSHVLATKLGAKLTEVRKNGTCPWLRPDGKTQVTVEYYNENGAMVPVRVHTVLISTQHDETVTNDEIAADLKQHVIKPVIPDKYLDDKTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTYGGWXAHGGGAFSGKDPTKVDRSGAYIVRQAAKSIVASGLARR 506
            T ELMPL   L+ KL  +L E+RK+G   +LRPD K+QVTVEY +EN    PVRV TV+ISTQHD   TN++I  D+   VIK VIP  YLDDK  F +NP+GRFVIGGP GD+GLTGRKII+DTYGG+  HGGGAFSGKD TKVDRS +Y  R  AK+IVA+GLA++
Sbjct:  142 TEELMPLPIALSHKLVRRLAELRKSGEISYLRPDAKSQVTVEY-DENDR--PVRVDTVVISTQHDPEATNEQIHQDVIDKVIKEVIPSSYLDDKAKFFINPTGRFVIGGPQGDSGLTGRKIIVDTYGGYSRHGGGAFSGKDATKVDRSASYAARYIAKNIVAAGLAKK 306          
BLAST of FC930974 vs. ExPASy Swiss-Prot
Match: METK_THELT (S-adenosylmethionine synthetase OS=Thermotoga lettingae (strain ATCC BAA-301 / DSM 14385 / TMO) GN=metK PE=3 SV=1)

HSP 1 Score: 204.527 bits (519), Expect = 2.288e-52
Identity = 101/168 (60.12%), Postives = 124/168 (73.81%), Query Frame = 3
Query:    3 TPELMPLSHVLATKLGAKLTEVRKNGTCPWLRPDGKTQVTVEYYNENGAMVPVRVHTVLISTQHDETVTNDEIAADLKQHVIKPVIPDKYLDDKTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTYGGWXAHGGGAFSGKDPTKVDRSGAYIVRQAAKSIVASGLARR 506
            TPE MPL  VLA +L  +L++VRK    P+LRPDGKTQVTVEY ++     P+R+ T+LIS QHD  VT +E+   L +HVIKP IP++Y  D     +NP+GRFV+GGP  D GLTGRKII+DTYGGW  HGGGAFSGKDPTKVDRS  Y+ R  AK++VA+GLA R
Sbjct:  141 TPEFMPLPIVLAHQLAMRLSKVRKEKIVPFLRPDGKTQVTVEYSDDGK---PMRIDTILISAQHDPNVTINELKEVLLEHVIKPTIPEQYWSDNIKILVNPTGRFVLGGPSADTGLTGRKIIVDTYGGWVPHGGGAFSGKDPTKVDRSAHYMARYVAKNVVAAGLADR 305          
BLAST of FC930974 vs. ExPASy Swiss-Prot
Match: METK_LACAC (S-adenosylmethionine synthetase OS=Lactobacillus acidophilus GN=metK PE=3 SV=1)

HSP 1 Score: 204.527 bits (519), Expect = 2.288e-52
Identity = 107/169 (63.31%), Postives = 127/169 (75.15%), Query Frame = 3
Query:    3 TPELMPLSHVLATKLGAKLTEVRKNGTCPWLRPDGKTQVTVEYYNENGAMVPVRVHTVLISTQHDETVTNDEIAADLKQHVIKPVIPDKYLDDKTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTYGGWXAHGGGAFSGKDPTKVDRSGAYIVRQAAKSIVASGLARRC 509
            TPELMPL   L+ +L  ++  +RK+ T  WLRPD K QVTVEY +ENG   P+ V TV+ISTQ D  V+N+EI   +   VIK VIP KYLD+ T F +NPSGRFVIGGP GD+GLTGRKII+DTYGG+  HGGGAFSGKDPTKVDRS +Y  R  AK+IVA+GLA RC
Sbjct:  142 TPELMPLPISLSHRLMRRVASLRKDHTLEWLRPDAKAQVTVEY-DENGK--PLCVDTVVISTQTDAEVSNEEICRAMIDLVIKEVIPAKYLDENTKFLINPSGRFVIGGPKGDSGLTGRKIIVDTYGGYARHGGGAFSGKDPTKVDRSASYAARYVAKNIVAAGLAYRC 307          
BLAST of FC930974 vs. ExPASy Swiss-Prot
Match: METK_THETN (S-adenosylmethionine synthetase OS=Thermoanaerobacter tengcongensis GN=metK PE=3 SV=1)

HSP 1 Score: 204.142 bits (518), Expect = 2.988e-52
Identity = 99/169 (58.58%), Postives = 125/169 (73.96%), Query Frame = 3
Query:    3 TPELMPLSHVLATKLGAKLTEVRKNGTCPWLRPDGKTQVTVEYYNENGAMVPVRVHTVLISTQHDETVTNDEIAADLKQHVIKPVIPDKYLDDKTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTYGGWXAHGGGAFSGKDPTKVDRSGAYIVRQAAKSIVASGLARRC 509
            T ELMP+  +LA KL  +L EVRKNGT  +LRPDGKTQVTVEY  +     PVRV +V++S QH   V +D I  D+ +HV+  +IP+  +D  T   +NP+GRFV+GGP  D+GLTGRKII+DTYGG+  HGGGAFSGKDPTKVDRS +Y  R  AK+IVA+GLA++C
Sbjct:  141 TEELMPMPIMLAHKLARRLAEVRKNGTLSYLRPDGKTQVTVEYEEDR----PVRVDSVVVSAQHAPEVDHDTIEKDIIEHVVNVIIPENMMDKNTKIFVNPTGRFVLGGPQADSGLTGRKIIVDTYGGYARHGGGAFSGKDPTKVDRSASYAARYVAKNIVAAGLAKKC 305          
BLAST of FC930974 vs. ExPASy Swiss-Prot
Match: METK_STRZT (S-adenosylmethionine synthetase OS=Streptococcus pneumoniae (strain Taiwan19F-14) GN=metK PE=3 SV=1)

HSP 1 Score: 204.142 bits (518), Expect = 2.988e-52
Identity = 106/168 (63.10%), Postives = 127/168 (75.60%), Query Frame = 3
Query:    3 TPELMPLSHVLATKLGAKLTEVRKNGTCPWLRPDGKTQVTVEYYNENGAMVPVRVHTVLISTQHDETVTNDEIAADLKQHVIKPVIPDKYLDDKTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTYGGWXAHGGGAFSGKDPTKVDRSGAYIVRQAAKSIVASGLARR 506
            T ELMPL   L+ KL  +L E+RK+G   +LRPD K+QVTVEY +EN    PVRV TV+ISTQHD   TN++I  D+   VIK VIP  YLDDKT F +NP+GRFVIGGP GD+GLTGRKII+DTYGG+  HGGGAFSGKD TKVDRS +Y  R  AK+IVA+ LA++
Sbjct:  142 TEELMPLPIALSHKLVRRLAELRKSGEISYLRPDAKSQVTVEY-DENDR--PVRVDTVVISTQHDPEATNEQIHQDVIDKVIKEVIPSSYLDDKTKFFINPTGRFVIGGPQGDSGLTGRKIIVDTYGGYSRHGGGAFSGKDATKVDRSASYAARYIAKNIVAADLAKK 306          
The following BLAST results are available for this feature:
BLAST of FC930974 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
METK_DESHD1.027e-5259.76S-adenosylmethionine synthetase OS=Desulfitobacter... [more]
METK_THEAB1.341e-5264.46S-adenosylmethionine synthetase OS=Thermosipho afr... [more]
METK_STRA51.341e-5262.50S-adenosylmethionine synthetase OS=Streptococcus a... [more]
METK_STRA11.341e-5262.50S-adenosylmethionine synthetase OS=Streptococcus a... [more]
METK_STAAU1.341e-5259.41S-adenosylmethionine synthetase OS=Staphylococcus ... [more]
METK_STRZP1.752e-5263.10S-adenosylmethionine synthetase OS=Streptococcus p... [more]
METK_THELT2.288e-5260.12S-adenosylmethionine synthetase OS=Thermotoga lett... [more]
METK_LACAC2.288e-5263.31S-adenosylmethionine synthetase OS=Lactobacillus a... [more]
METK_THETN2.988e-5258.58S-adenosylmethionine synthetase OS=Thermoanaerobac... [more]
METK_STRZT2.988e-5263.10S-adenosylmethionine synthetase OS=Streptococcus p... [more]

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Properties
Property NameValue
Genbank descriptionC34100A09EF PostHarvP1 Citrus clementina cDNA clone C34100A09, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC930974 ID=FC930974; Name=FC930974; organism=Citrus clementina; type=EST; length=513bp
GGACTCCTGAGTTGATGCCTTTGAGTCATGTGCTTGCAACAAAGCTTGGT
GCTAAGCTTACAGAAGTGAGGAAGAATGGGACCTGTCCGTGGCTGAGGCC
AGATGGCAAAACACAAGTCACTGTTGAGTATTACAATGAGAATGGCGCCA
TGGTTCCTGTTCGTGTCCATACTGTGCTCATCTCAACTCAGCACGATGAG
ACTGTAACTAATGATGAGATTGCTGCAGATCTCAAGCAACATGTGATCAA
GCCTGTGATTCCTGACAAGTACTTGGATGACAAAACTATTTTCCATCTTA
ACCCATCTGGCCGTTTTGTGATTGGTGGCCCTCACGGTGATGCTGGGCTC
ACCGGCCGGAAGATTATTATTGATACTTATGGTGGCTGGNGGGCACACGG
TGGTGGGGCTTTCTCAGGGAAAGATCCTACCAAGGTTGATAGAAGCGGTG
CTTACATTGTAAGGCAAGCTGCTAAGAGTATTGTGGCAAGCGGGCTTGCC
AGGAGATGCATTG
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