FC930974

Overview
NameFC930974
Unique NameFC930974
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length513
Libraries
Library NameType
PostHarvP1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC930974 vs. ExPASy Swiss-Prot
Match: METK_LACH4 (S-adenosylmethionine synthetase OS=Lactobacillus helveticus (strain DPC 4571) GN=metK PE=3 SV=1)

HSP 1 Score: 203.756 bits (517), Expect = 3.903e-52
Identity = 106/169 (62.72%), Postives = 124/169 (73.37%), Query Frame = 3
Query:    3 TPELMPLSHVLATKLGAKLTEVRKNGTCPWLRPDGKTQVTVEYYNENGAMVPVRVHTVLISTQHDETVTNDEIAADLKQHVIKPVIPDKYLDDKTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTYGGWXAHGGGAFSGKDPTKVDRSGAYIVRQAAKSIVASGLARRC 509
            TPELMPL   LA +L  ++  +RK+ T  WLRPD K QVTVEY   N    P+RV TV+ISTQ D  V+N EI   +   VIK VIP +YLD+KT F +NPSGRFVIGGP GD+GLTGRKII+DTYGG+  HGGGAFSGKD TKVDRS +Y  R  AK+IVA+GLA RC
Sbjct:  142 TPELMPLPISLAHRLMRRVASLRKDHTLDWLRPDAKAQVTVEYDENNN---PLRVDTVVISTQTDAEVSNKEIRRAMIDLVIKEVIPARYLDEKTKFLINPSGRFVIGGPKGDSGLTGRKIIVDTYGGYARHGGGAFSGKDSTKVDRSASYAARYVAKNIVAAGLAYRC 307          
BLAST of FC930974 vs. ExPASy Swiss-Prot
Match: METK_DESRM (S-adenosylmethionine synthetase OS=Desulfotomaculum reducens (strain MI-1) GN=metK PE=3 SV=1)

HSP 1 Score: 203.756 bits (517), Expect = 3.903e-52
Identity = 104/169 (61.54%), Postives = 124/169 (73.37%), Query Frame = 3
Query:    3 TPELMPLSHVLATKLGAKLTEVRKNGTCPWLRPDGKTQVTVEYYNENGAMVPVRVHTVLISTQHDETVTNDEIAADLKQHVIKPVIPDKYLDDKTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTYGGWXAHGGGAFSGKDPTKVDRSGAYIVRQAAKSIVASGLARRC 509
            TPELMPL   LA  +  +L+EVRK G   +LRPDGKTQVTVEY  +     P R+ TV+ISTQH   V  + I  D+ + V   V+P + +DDKT F +NP+GRFVIGGPHGDAGLTGRKII+DTYGG   HGGGAFSGKDPTKVDRS AY  R  AK++VA+GLA+RC
Sbjct:  142 TPELMPLPISLAHTMARRLSEVRKTGIVDYLRPDGKTQVTVEYDGDK----PSRIDTVVISTQHHPEVDLETIRKDMIEKVALHVLPAELVDDKTRFLINPTGRFVIGGPHGDAGLTGRKIIVDTYGGSARHGGGAFSGKDPTKVDRSAAYAARYVAKNVVAAGLAKRC 306          
BLAST of FC930974 vs. ExPASy Swiss-Prot
Match: METK_LACJO (S-adenosylmethionine synthetase OS=Lactobacillus johnsonii GN=metK PE=3 SV=1)

HSP 1 Score: 203.371 bits (516), Expect = 5.097e-52
Identity = 106/169 (62.72%), Postives = 123/169 (72.78%), Query Frame = 3
Query:    3 TPELMPLSHVLATKLGAKLTEVRKNGTCPWLRPDGKTQVTVEYYNENGAMVPVRVHTVLISTQHDETVTNDEIAADLKQHVIKPVIPDKYLDDKTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTYGGWXAHGGGAFSGKDPTKVDRSGAYIVRQAAKSIVASGLARRC 509
            TPELMPL   LA  L  ++  +RK G   WLRPD K QVTVEY +EN    P R+ TV+ISTQ D TV+NDEI   +   VIK VIP +YLD  T F +NPSGRFVIGGP GD+GLTGRKII+DTYGG+  HGGGAFSGKD TKVDRS +Y  R  AK+IVA+GLA +C
Sbjct:  144 TPELMPLPISLAHSLMRRVASLRKEGRLDWLRPDAKAQVTVEYDDENK---PKRIDTVVISTQTDATVSNDEIREAMIDMVIKKVIPSQYLDKDTKFLINPSGRFVIGGPKGDSGLTGRKIIVDTYGGYARHGGGAFSGKDLTKVDRSASYAARYVAKNIVAAGLAYQC 309          
BLAST of FC930974 vs. ExPASy Swiss-Prot
Match: METK_FERNB (S-adenosylmethionine synthetase OS=Fervidobacterium nodosum (strain ATCC 35602 / DSM 5306 / Rt17-B1) GN=metK PE=3 SV=1)

HSP 1 Score: 203.371 bits (516), Expect = 5.097e-52
Identity = 107/166 (64.46%), Postives = 123/166 (74.10%), Query Frame = 3
Query:    3 TPELMPLSHVLATKLGAKLTEVRKNGTCPWLRPDGKTQVTVEYYNENGAMVPVRVHTVLISTQHDETVTNDEIAADLKQHVIKPVIPDKYLDDKTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTYGGWXAHGGGAFSGKDPTKVDRSGAYIVRQAAKSIVASGLA 500
            T ELMPL  +LA KL  KL EVRKNGT P+LRPDGKTQVT+EY +EN    PVRV TVLISTQH+  VT  EI   L ++VI P+IP+   DD     +NP+GRFV+GGP  D GLTGRKII+DTYGG   HGGGAFSGKDPTKVDRS  Y  R  AK++VA+GLA
Sbjct:  141 TEELMPLPIMLAHKLAMKLAEVRKNGTVPFLRPDGKTQVTIEY-DENEK--PVRVDTVLISTQHEPDVTIPEIREALVKYVINPIIPENLRDDNMKILVNPTGRFVLGGPSADTGLTGRKIIVDTYGGAIPHGGGAFSGKDPTKVDRSAHYFARYVAKNVVAAGLA 303          
BLAST of FC930974 vs. ExPASy Swiss-Prot
Match: METK_ROSS1 (S-adenosylmethionine synthetase OS=Roseiflexus sp. (strain RS-1) GN=metK PE=3 SV=1)

HSP 1 Score: 202.986 bits (515), Expect = 6.657e-52
Identity = 102/168 (60.71%), Postives = 124/168 (73.81%), Query Frame = 3
Query:    3 TPELMPLSHVLATKLGAKLTEVRKNGTCPWLRPDGKTQVTVEYYNENGAMVPVRVHTVLISTQHDETVTNDEIAADLKQHVIKPVIPDKYLDDKTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTYGGWXAHGGGAFSGKDPTKVDRSGAYIVRQAAKSIVASGLARR 506
            TPELMPL   LA ++G +L+ +RK G  P+LRPDGK+QVTVEY        PVRV TVL+S QH   VT D+I  D+   VI  V+P + +D+KT + +NP+GRFVIGGP GD+GLTGRKII+DTYGG   HGGGAFSGKDPTKVDRS AY  R  AK++VA+GLA R
Sbjct:  151 TPELMPLPIALAHRIGRRLSRLRKEGVLPYLRPDGKSQVTVEYSYGR----PVRVDTVLVSNQHAPDVTQDQIRHDIIHQVIHAVVPPELIDEKTKYFVNPTGRFVIGGPMGDSGLTGRKIIVDTYGGMARHGGGAFSGKDPTKVDRSAAYACRWVAKNVVAAGLADR 314          
BLAST of FC930974 vs. ExPASy Swiss-Prot
Match: METK_OCEIH (S-adenosylmethionine synthetase OS=Oceanobacillus iheyensis GN=metK PE=3 SV=1)

HSP 1 Score: 202.986 bits (515), Expect = 6.657e-52
Identity = 102/169 (60.36%), Postives = 126/169 (74.56%), Query Frame = 3
Query:    3 TPELMPLSHVLATKLGAKLTEVRKNGTCPWLRPDGKTQVTVEYYNENGAMVPVRVHTVLISTQHDETVTNDEIAADLKQHVIKPVIPDKYLDDKTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTYGGWXAHGGGAFSGKDPTKVDRSGAYIVRQAAKSIVASGLARRC 509
            T ELMPL   LA +L  +L +VRK G   +LRPDGKTQVTVEY +EN    P R+ T++ISTQH   + N++I  D+ + VI+ V+P + LDDKT + +NP+GRFVIGGP GD GLTGRKII+DTYGG+  HGGGAFSGKD TKVDRS AY  R  AK+IVA+GLA+ C
Sbjct:  144 TEELMPLPISLAHQLSKRLADVRKEGIVDYLRPDGKTQVTVEY-DENDK--PERIDTIVISTQHHSEIQNEQIERDMIEKVIQAVVPSELLDDKTKYFINPTGRFVIGGPQGDVGLTGRKIIVDTYGGYARHGGGAFSGKDATKVDRSAAYAARYVAKNIVAAGLAKSC 309          
BLAST of FC930974 vs. ExPASy Swiss-Prot
Match: METK_DEHSC (S-adenosylmethionine synthetase OS=Dehalococcoides sp. (strain CBDB1) GN=metK PE=3 SV=1)

HSP 1 Score: 202.986 bits (515), Expect = 6.657e-52
Identity = 98/168 (58.33%), Postives = 125/168 (74.40%), Query Frame = 3
Query:    3 TPELMPLSHVLATKLGAKLTEVRKNGTCPWLRPDGKTQVTVEYYNENGAMVPVRVHTVLISTQHDETVTNDEIAADLKQHVIKPVIPDKYLDDKTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTYGGWXAHGGGAFSGKDPTKVDRSGAYIVRQAAKSIVASGLARR 506
            TPE MPL   LA +L  +L EVRKNGT P+LRPDGK+QVTVEY+N        R+ +V+I  QHD  +T ++I AD+ + VIKP+IP   LD+KT +++N +GRFV+GGP  D G TGRKI++DTYGG+  HGGGAFSGKDPTKVDRS  Y+ R  AK++VA+GLA R
Sbjct:  147 TPEYMPLPISLAHRLSKRLAEVRKNGTLPYLRPDGKSQVTVEYHNGKAK----RISSVVIGAQHDPDITTEKIQADIIREVIKPIIPTNLLDEKTEYYVNATGRFVVGGPVSDTGFTGRKILVDTYGGFARHGGGAFSGKDPTKVDRSACYMARYIAKNLVAAGLADR 310          
BLAST of FC930974 vs. ExPASy Swiss-Prot
Match: METK_THEM4 (S-adenosylmethionine synthetase OS=Thermosipho melanesiensis (strain BI429 / DSM 12029) GN=metK PE=3 SV=1)

HSP 1 Score: 202.216 bits (513), Expect = 1.136e-51
Identity = 106/166 (63.86%), Postives = 125/166 (75.30%), Query Frame = 3
Query:    3 TPELMPLSHVLATKLGAKLTEVRKNGTCPWLRPDGKTQVTVEYYNENGAMVPVRVHTVLISTQHDETVTNDEIAADLKQHVIKPVIPDKYLDDKTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTYGGWXAHGGGAFSGKDPTKVDRSGAYIVRQAAKSIVASGLA 500
            T ELMPL  +LA KL  KL+E+RK+GT P+LRPDGKTQVTVEY +EN    PVRV TVLISTQH+  VT  EI   L ++VI P+IP++  DD     +NP+GRFV+GGP  D GLTGRKII+DTYGG   HGGGAFSGKDPTKVDRS  Y  R  AK++VA+GLA
Sbjct:  142 TKELMPLPIMLAHKLALKLSEIRKSGTVPFLRPDGKTQVTVEY-DENDR--PVRVDTVLISTQHEPNVTIAEIKEALVKYVIDPIIPEELRDDNLNILVNPTGRFVLGGPSADTGLTGRKIIVDTYGGAIPHGGGAFSGKDPTKVDRSAHYFARYVAKNVVAAGLA 304          
BLAST of FC930974 vs. ExPASy Swiss-Prot
Match: METK_STRS7 (S-adenosylmethionine synthetase OS=Streptococcus equi subsp. zooepidemicus (strain H70) GN=metK PE=3 SV=1)

HSP 1 Score: 202.216 bits (513), Expect = 1.136e-51
Identity = 103/168 (61.31%), Postives = 127/168 (75.60%), Query Frame = 3
Query:    3 TPELMPLSHVLATKLGAKLTEVRKNGTCPWLRPDGKTQVTVEYYNENGAMVPVRVHTVLISTQHDETVTNDEIAADLKQHVIKPVIPDKYLDDKTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTYGGWXAHGGGAFSGKDPTKVDRSGAYIVRQAAKSIVASGLARR 506
            TPELMPL   L+ +L  +L  +RK+G   +LRPD K+QVTVEY   +    PVRV TV+ISTQHD  V+ND+I  D+ + VIK VIP  YLD+KT F +NP+GRFVIGGP GD+GLTGRKII+DTYGG+  HGGGAFSGKD TKVDRS +Y  R  AK++VA+GLA +
Sbjct:  141 TPELMPLPISLSHQLVRRLAALRKSGEISYLRPDAKSQVTVEYDEHDK---PVRVDTVVISTQHDPEVSNDQIRQDMIEQVIKAVIPAHYLDEKTRFLINPTGRFVIGGPQGDSGLTGRKIIVDTYGGYARHGGGAFSGKDATKVDRSASYAARYIAKNLVAAGLASK 305          
BLAST of FC930974 vs. ExPASy Swiss-Prot
Match: METK_STRP1 (S-adenosylmethionine synthetase OS=Streptococcus pyogenes serotype M1 GN=metK PE=3 SV=1)

HSP 1 Score: 202.216 bits (513), Expect = 1.136e-51
Identity = 103/168 (61.31%), Postives = 125/168 (74.40%), Query Frame = 3
Query:    3 TPELMPLSHVLATKLGAKLTEVRKNGTCPWLRPDGKTQVTVEYYNENGAMVPVRVHTVLISTQHDETVTNDEIAADLKQHVIKPVIPDKYLDDKTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTYGGWXAHGGGAFSGKDPTKVDRSGAYIVRQAAKSIVASGLARR 506
            TPELMPL   L+ +L  +L E+RK+G   +LRPD K+QVTVEY   +    PVRV TV+ISTQHD   TND+I  D+ + VIK VIP  YLDD T F +NP+GRFVIGGP GD+GLTGRKII+DTYGG+  HGGGAFSGKD TKVDRS +Y  R  AK++VA+GL  +
Sbjct:  141 TPELMPLPISLSHQLVRRLAELRKSGEISYLRPDAKSQVTVEYDEHDK---PVRVDTVVISTQHDPEATNDQIRQDVIEKVIKAVIPADYLDDDTKFFINPTGRFVIGGPQGDSGLTGRKIIVDTYGGYSRHGGGAFSGKDATKVDRSASYAARYIAKNLVAAGLVTK 305          
The following BLAST results are available for this feature:
BLAST of FC930974 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
METK_LACH43.903e-5262.72S-adenosylmethionine synthetase OS=Lactobacillus h... [more]
METK_DESRM3.903e-5261.54S-adenosylmethionine synthetase OS=Desulfotomaculu... [more]
METK_LACJO5.097e-5262.72S-adenosylmethionine synthetase OS=Lactobacillus j... [more]
METK_FERNB5.097e-5264.46S-adenosylmethionine synthetase OS=Fervidobacteriu... [more]
METK_ROSS16.657e-5260.71S-adenosylmethionine synthetase OS=Roseiflexus sp.... [more]
METK_OCEIH6.657e-5260.36S-adenosylmethionine synthetase OS=Oceanobacillus ... [more]
METK_DEHSC6.657e-5258.33S-adenosylmethionine synthetase OS=Dehalococcoides... [more]
METK_THEM41.136e-5163.86S-adenosylmethionine synthetase OS=Thermosipho mel... [more]
METK_STRS71.136e-5161.31S-adenosylmethionine synthetase OS=Streptococcus e... [more]
METK_STRP11.136e-5161.31S-adenosylmethionine synthetase OS=Streptococcus p... [more]

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Properties
Property NameValue
Genbank descriptionC34100A09EF PostHarvP1 Citrus clementina cDNA clone C34100A09, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC930974 ID=FC930974; Name=FC930974; organism=Citrus clementina; type=EST; length=513bp
GGACTCCTGAGTTGATGCCTTTGAGTCATGTGCTTGCAACAAAGCTTGGT
GCTAAGCTTACAGAAGTGAGGAAGAATGGGACCTGTCCGTGGCTGAGGCC
AGATGGCAAAACACAAGTCACTGTTGAGTATTACAATGAGAATGGCGCCA
TGGTTCCTGTTCGTGTCCATACTGTGCTCATCTCAACTCAGCACGATGAG
ACTGTAACTAATGATGAGATTGCTGCAGATCTCAAGCAACATGTGATCAA
GCCTGTGATTCCTGACAAGTACTTGGATGACAAAACTATTTTCCATCTTA
ACCCATCTGGCCGTTTTGTGATTGGTGGCCCTCACGGTGATGCTGGGCTC
ACCGGCCGGAAGATTATTATTGATACTTATGGTGGCTGGNGGGCACACGG
TGGTGGGGCTTTCTCAGGGAAAGATCCTACCAAGGTTGATAGAAGCGGTG
CTTACATTGTAAGGCAAGCTGCTAAGAGTATTGTGGCAAGCGGGCTTGCC
AGGAGATGCATTG
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