FC930974

Overview
NameFC930974
Unique NameFC930974
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length513
Libraries
Library NameType
PostHarvP1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC930974 vs. ExPASy Swiss-Prot
Match: METK_CLOBB (S-adenosylmethionine synthetase OS=Clostridium botulinum (strain Eklund 17B / Type B) GN=metK PE=3 SV=1)

HSP 1 Score: 200.29 bits (508), Expect = 4.315e-51
Identity = 98/166 (59.04%), Postives = 125/166 (75.30%), Query Frame = 3
Query:    3 TPELMPLSHVLATKLGAKLTEVRKNGTCPWLRPDGKTQVTVEYYNENGAMVPVRVHTVLISTQHDETVTNDEIAADLKQHVIKPVIPDKYLDDKTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTYGGWXAHGGGAFSGKDPTKVDRSGAYIVRQAAKSIVASGLA 500
            T   MPL   +A KL  +LTEVRK+GT  +LRPDGKTQVTVEY N      P R+ T++ISTQH E V+ ++I  D+K++VI  V+P + LD +T + +NP+GRFV+GGP GD+GLTGRKII+DTYGG+  HGGGAFSGKD TKVDRS AY  R  AK++VA+G+A
Sbjct:  139 TDAYMPLPIYMAHKLSRRLTEVRKDGTLDYLRPDGKTQVTVEYENNK----PKRIDTIVISTQHGEEVSLEKIEKDIKEYVINAVVPTELLDSETRYFINPTGRFVVGGPQGDSGLTGRKIIVDTYGGYGRHGGGAFSGKDSTKVDRSAAYAARWVAKNLVAAGIA 300          
BLAST of FC930974 vs. ExPASy Swiss-Prot
Match: METK_STRU0 (S-adenosylmethionine synthetase OS=Streptococcus uberis (strain ATCC BAA-854 / 0140J) GN=metK PE=3 SV=1)

HSP 1 Score: 199.904 bits (507), Expect = 5.636e-51
Identity = 101/168 (60.12%), Postives = 127/168 (75.60%), Query Frame = 3
Query:    3 TPELMPLSHVLATKLGAKLTEVRKNGTCPWLRPDGKTQVTVEYYNENGAMVPVRVHTVLISTQHDETVTNDEIAADLKQHVIKPVIPDKYLDDKTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTYGGWXAHGGGAFSGKDPTKVDRSGAYIVRQAAKSIVASGLARR 506
            TPELMPL   L+ KL  KL ++RK+G   +LRPD K+QVTVEY + +    PVRV TV+ISTQHD  V+ + I  D+ + VIK VIP  ++DD T + +NP+GRFVIGGP GD+GLTGRKII+DTYGG+  HGGGAFSGKD TKVDRS +Y  R  AK+IVA+GLA++
Sbjct:  141 TPELMPLPISLSHKLVKKLADLRKSGDITYLRPDAKSQVTVEYDDNDQ---PVRVDTVVISTQHDPEVSQETIRHDVIEKVIKEVIPTSFIDDNTKYFINPTGRFVIGGPQGDSGLTGRKIIVDTYGGYSRHGGGAFSGKDATKVDRSASYAARYIAKNIVAAGLAKK 305          
BLAST of FC930974 vs. ExPASy Swiss-Prot
Match: METK_STAS1 (S-adenosylmethionine synthetase OS=Staphylococcus saprophyticus subsp. saprophyticus (strain ATCC 15305 / DSM 20229) GN=metK PE=3 SV=1)

HSP 1 Score: 199.904 bits (507), Expect = 5.636e-51
Identity = 97/169 (57.40%), Postives = 125/169 (73.96%), Query Frame = 3
Query:    3 TPELMPLSHVLATKLGAKLTEVRKNGTCPWLRPDGKTQVTVEYYNENGAMVPVRVHTVLISTQHDETVTNDEIAADLKQHVIKPVIPDKYLDDKTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTYGGWXAHGGGAFSGKDPTKVDRSGAYIVRQAAKSIVASGLARRC 509
            T   MPL   L+ +L  +L++VRK+    +LRPDGK QVTVEY  ++    PVR+ T+++STQH E +  D+I  D+K HVI P +P+  LD++T F++NP+GRFVIGGP GDAGLTGRKII+DTYGG+  HGGG FSGKDPTKVDRS AY  R  AK+IVA+ LA +C
Sbjct:  143 TDTYMPLPIFLSHQLAKRLSDVRKDEILKYLRPDGKVQVTVEYDEQDK---PVRIDTIVLSTQHAEDIELDQIKDDIKTHVIYPTVPESLLDEQTKFYINPTGRFVIGGPQGDAGLTGRKIIVDTYGGYARHGGGCFSGKDPTKVDRSAAYAARYVAKNIVAAQLAEKC 308          
BLAST of FC930974 vs. ExPASy Swiss-Prot
Match: METK_NOCSJ (S-adenosylmethionine synthetase OS=Nocardioides sp. (strain BAA-499 / JS614) GN=metK PE=3 SV=1)

HSP 1 Score: 199.904 bits (507), Expect = 5.636e-51
Identity = 104/170 (61.18%), Postives = 127/170 (74.71%), Query Frame = 3
Query:    3 TPELMPLSHVLATKLGAKLTEVRKNGTCPWLRPDGKTQVTVEYYNENGAMVPVRVHTVLISTQHDETVTNDEIAADLKQHVIKPVIPDKYLDDKTIFHL-NPSGRFVIGGPHGDAGLTGRKIIIDTYGGWXAHGGGAFSGKDPTKVDRSGAYIVRQAAKSIVASGLARRC 509
            T  LMPL  V+A +L  +LT VRK+GT P+LRPDGKTQVT+EY  EN    PVRV TV++S+QHDE    D + AD+K+HVI PV+    +  +    L NP+GRFV+GGP GDAGLTGRKII+DTYGG   HGGGAFSGKDP+KVDRS AY +R  AK++VA+GLA RC
Sbjct:  140 TDVLMPLPIVIAQRLAEQLTAVRKDGTLPYLRPDGKTQVTIEYDAENR---PVRVDTVVLSSQHDEDTELDTLEADVKKHVIDPVLATFPIPSEGYRLLVNPTGRFVVGGPMGDAGLTGRKIIVDTYGGMARHGGGAFSGKDPSKVDRSAAYAMRWVAKNVVAAGLATRC 306          
BLAST of FC930974 vs. ExPASy Swiss-Prot
Match: METK_LISW6 (S-adenosylmethionine synthetase OS=Listeria welshimeri serovar 6b (strain ATCC 35897 / DSM 20650 / SLCC5334) GN=metK PE=3 SV=1)

HSP 1 Score: 199.904 bits (507), Expect = 5.636e-51
Identity = 102/168 (60.71%), Postives = 123/168 (73.21%), Query Frame = 3
Query:    3 TPELMPLSHVLATKLGAKLTEVRKNGTCPWLRPDGKTQVTVEYYNENGAMVPVRVHTVLISTQHDETVTNDEIAADLKQHVIKPVIPDKYLDDKTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTYGGWXAHGGGAFSGKDPTKVDRSGAYIVRQAAKSIVASGLARR 506
            T ELMPL   LA  L  KLTE+RK     +LRPD KTQVTVEY   N    PVR+ T+++STQH   +T +EIA DL  ++   VI   +LD+ T + +NP+GRFVIGGP GDAGLTGRKII+DTYGG+  HGGGAFSGKDPTKVDRSGAY  R  AK+IVA+GLA++
Sbjct:  144 TEELMPLPIFLAHGLARKLTELRKTKKLDYLRPDAKTQVTVEYDELNQ---PVRIDTIVVSTQHHPDITQEEIAKDLHTYLFPEVIDPSFLDEDTKYFINPTGRFVIGGPLGDAGLTGRKIIVDTYGGYARHGGGAFSGKDPTKVDRSGAYAARYVAKNIVAAGLAKK 308          
BLAST of FC930974 vs. ExPASy Swiss-Prot
Match: METK_LISMO (S-adenosylmethionine synthetase OS=Listeria monocytogenes GN=metK PE=3 SV=1)

HSP 1 Score: 199.134 bits (505), Expect = 9.613e-51
Identity = 101/168 (60.12%), Postives = 123/168 (73.21%), Query Frame = 3
Query:    3 TPELMPLSHVLATKLGAKLTEVRKNGTCPWLRPDGKTQVTVEYYNENGAMVPVRVHTVLISTQHDETVTNDEIAADLKQHVIKPVIPDKYLDDKTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTYGGWXAHGGGAFSGKDPTKVDRSGAYIVRQAAKSIVASGLARR 506
            T ELMPL   LA  L  KLTE+RK     +LRPD KTQVTVEY   N    PVR+ T+++STQH   +T ++IA DL  ++   VI   +LD+ T + +NP+GRFVIGGP GDAGLTGRKII+DTYGG+  HGGGAFSGKDPTKVDRSGAY  R  AK+IVA+GLA++
Sbjct:  144 TEELMPLPIFLAHGLARKLTELRKTNKLDYLRPDAKTQVTVEYDEFNQ---PVRIDTIVVSTQHHPDITQEQIAKDLHTYLFPEVIDASFLDEDTKYFINPTGRFVIGGPLGDAGLTGRKIIVDTYGGYARHGGGAFSGKDPTKVDRSGAYAARYVAKNIVAAGLAKK 308          
BLAST of FC930974 vs. ExPASy Swiss-Prot
Match: METK_LISMH (S-adenosylmethionine synthetase OS=Listeria monocytogenes serotype 4a (strain HCC23) GN=metK PE=3 SV=1)

HSP 1 Score: 199.134 bits (505), Expect = 9.613e-51
Identity = 101/168 (60.12%), Postives = 123/168 (73.21%), Query Frame = 3
Query:    3 TPELMPLSHVLATKLGAKLTEVRKNGTCPWLRPDGKTQVTVEYYNENGAMVPVRVHTVLISTQHDETVTNDEIAADLKQHVIKPVIPDKYLDDKTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTYGGWXAHGGGAFSGKDPTKVDRSGAYIVRQAAKSIVASGLARR 506
            T ELMPL   LA  L  KLTE+RK     +LRPD KTQVTVEY   N    PVR+ T+++STQH   +T ++IA DL  ++   VI   +LD+ T + +NP+GRFVIGGP GDAGLTGRKII+DTYGG+  HGGGAFSGKDPTKVDRSGAY  R  AK+IVA+GLA++
Sbjct:  144 TEELMPLPIFLAHGLARKLTELRKTNKLDYLRPDAKTQVTVEYDEFNQ---PVRIDTIVVSTQHHPDITQEQIAKDLHTYLFPEVIDASFLDEDTKYFINPTGRFVIGGPLGDAGLTGRKIIVDTYGGYARHGGGAFSGKDPTKVDRSGAYAARYVAKNIVAAGLAKK 308          
BLAST of FC930974 vs. ExPASy Swiss-Prot
Match: METK_LISMF (S-adenosylmethionine synthetase OS=Listeria monocytogenes serotype 4b (strain F2365) GN=metK PE=3 SV=1)

HSP 1 Score: 199.134 bits (505), Expect = 9.613e-51
Identity = 101/168 (60.12%), Postives = 123/168 (73.21%), Query Frame = 3
Query:    3 TPELMPLSHVLATKLGAKLTEVRKNGTCPWLRPDGKTQVTVEYYNENGAMVPVRVHTVLISTQHDETVTNDEIAADLKQHVIKPVIPDKYLDDKTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTYGGWXAHGGGAFSGKDPTKVDRSGAYIVRQAAKSIVASGLARR 506
            T ELMPL   LA  L  KLTE+RK     +LRPD KTQVTVEY   N    PVR+ T+++STQH   +T ++IA DL  ++   VI   +LD+ T + +NP+GRFVIGGP GDAGLTGRKII+DTYGG+  HGGGAFSGKDPTKVDRSGAY  R  AK+IVA+GLA++
Sbjct:  144 TEELMPLPIFLAHGLARKLTELRKTNKLDYLRPDAKTQVTVEYDEFNQ---PVRIDTIVVSTQHHPDITQEQIAKDLHTYLFPEVIDASFLDEDTKYFINPTGRFVIGGPLGDAGLTGRKIIVDTYGGYARHGGGAFSGKDPTKVDRSGAYAARYVAKNIVAAGLAKK 308          
BLAST of FC930974 vs. ExPASy Swiss-Prot
Match: METK_LISMC (S-adenosylmethionine synthetase OS=Listeria monocytogenes serotype 4b (strain Clip81459) GN=metK PE=3 SV=1)

HSP 1 Score: 199.134 bits (505), Expect = 9.613e-51
Identity = 101/168 (60.12%), Postives = 123/168 (73.21%), Query Frame = 3
Query:    3 TPELMPLSHVLATKLGAKLTEVRKNGTCPWLRPDGKTQVTVEYYNENGAMVPVRVHTVLISTQHDETVTNDEIAADLKQHVIKPVIPDKYLDDKTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTYGGWXAHGGGAFSGKDPTKVDRSGAYIVRQAAKSIVASGLARR 506
            T ELMPL   LA  L  KLTE+RK     +LRPD KTQVTVEY   N    PVR+ T+++STQH   +T ++IA DL  ++   VI   +LD+ T + +NP+GRFVIGGP GDAGLTGRKII+DTYGG+  HGGGAFSGKDPTKVDRSGAY  R  AK+IVA+GLA++
Sbjct:  144 TEELMPLPIFLAHGLARKLTELRKTNKLDYLRPDAKTQVTVEYDEFNQ---PVRIDTIVVSTQHHPDITQEQIAKDLHTYLFPEVIDASFLDEDTKYFINPTGRFVIGGPLGDAGLTGRKIIVDTYGGYARHGGGAFSGKDPTKVDRSGAYAARYVAKNIVAAGLAKK 308          
BLAST of FC930974 vs. ExPASy Swiss-Prot
Match: METK_DESAP (S-adenosylmethionine synthetase OS=Desulforudis audaxviator (strain MP104C) GN=metK PE=3 SV=1)

HSP 1 Score: 199.134 bits (505), Expect = 9.613e-51
Identity = 101/169 (59.76%), Postives = 123/169 (72.78%), Query Frame = 3
Query:    3 TPELMPLSHVLATKLGAKLTEVRKNGTCPWLRPDGKTQVTVEYYNENGAMVPVRVHTVLISTQHDETVTNDEIAADLKQHVIKPVIPDKYLDDKTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTYGGWXAHGGGAFSGKDPTKVDRSGAYIVRQAAKSIVASGLARRC 509
            TP LMP+   LA +L  +L  VRKNGT P+LRPDGKTQVTV+Y  +NG   PV+V TV+IS QH   V    I ADL + V++P+IP   + + T + +NP+GRFVIGGP  D GLTGRKI++DTYGG   HGGGAFSGKDPTKVDRS +Y  R  AK+IVA+GLA RC
Sbjct:  140 TPTLMPMPIYLAHRLARRLASVRKNGTLPYLRPDGKTQVTVQY--DNGR--PVKVDTVVISAQHHPAVDLGTIRADLIEKVVEPIIPVGLITNSTRYLINPTGRFVIGGPQADTGLTGRKIVVDTYGGMARHGGGAFSGKDPTKVDRSASYAARYVAKNIVAAGLASRC 304          
The following BLAST results are available for this feature:
BLAST of FC930974 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
METK_CLOBB4.315e-5159.04S-adenosylmethionine synthetase OS=Clostridium bot... [more]
METK_STRU05.636e-5160.12S-adenosylmethionine synthetase OS=Streptococcus u... [more]
METK_STAS15.636e-5157.40S-adenosylmethionine synthetase OS=Staphylococcus ... [more]
METK_NOCSJ5.636e-5161.18S-adenosylmethionine synthetase OS=Nocardioides sp... [more]
METK_LISW65.636e-5160.71S-adenosylmethionine synthetase OS=Listeria welshi... [more]
METK_LISMO9.613e-5160.12S-adenosylmethionine synthetase OS=Listeria monocy... [more]
METK_LISMH9.613e-5160.12S-adenosylmethionine synthetase OS=Listeria monocy... [more]
METK_LISMF9.613e-5160.12S-adenosylmethionine synthetase OS=Listeria monocy... [more]
METK_LISMC9.613e-5160.12S-adenosylmethionine synthetase OS=Listeria monocy... [more]
METK_DESAP9.613e-5159.76S-adenosylmethionine synthetase OS=Desulforudis au... [more]

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Properties
Property NameValue
Genbank descriptionC34100A09EF PostHarvP1 Citrus clementina cDNA clone C34100A09, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC930974 ID=FC930974; Name=FC930974; organism=Citrus clementina; type=EST; length=513bp
GGACTCCTGAGTTGATGCCTTTGAGTCATGTGCTTGCAACAAAGCTTGGT
GCTAAGCTTACAGAAGTGAGGAAGAATGGGACCTGTCCGTGGCTGAGGCC
AGATGGCAAAACACAAGTCACTGTTGAGTATTACAATGAGAATGGCGCCA
TGGTTCCTGTTCGTGTCCATACTGTGCTCATCTCAACTCAGCACGATGAG
ACTGTAACTAATGATGAGATTGCTGCAGATCTCAAGCAACATGTGATCAA
GCCTGTGATTCCTGACAAGTACTTGGATGACAAAACTATTTTCCATCTTA
ACCCATCTGGCCGTTTTGTGATTGGTGGCCCTCACGGTGATGCTGGGCTC
ACCGGCCGGAAGATTATTATTGATACTTATGGTGGCTGGNGGGCACACGG
TGGTGGGGCTTTCTCAGGGAAAGATCCTACCAAGGTTGATAGAAGCGGTG
CTTACATTGTAAGGCAAGCTGCTAAGAGTATTGTGGCAAGCGGGCTTGCC
AGGAGATGCATTG
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