FC930974

Overview
NameFC930974
Unique NameFC930974
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length513
Libraries
Library NameType
PostHarvP1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC930974 vs. ExPASy Swiss-Prot
Match: METK_STAEQ (S-adenosylmethionine synthetase OS=Staphylococcus epidermidis (strain ATCC 35984 / RP62A) GN=metK PE=3 SV=1)

HSP 1 Score: 195.282 bits (495), Expect = 1.388e-49
Identity = 97/169 (57.40%), Postives = 122/169 (72.19%), Query Frame = 3
Query:    3 TPELMPLSHVLATKLGAKLTEVRKNGTCPWLRPDGKTQVTVEYYNENGAMVPVRVHTVLISTQHDETVTNDEIAADLKQHVIKPVIPDKYLDDKTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTYGGWXAHGGGAFSGKDPTKVDRSGAYIVRQAAKSIVASGLARRC 509
            T   MPL   L+ +L  +L +VRK+    +LRPDGK QVTVEY  ++    P R+ T+++STQH E V   +I  D+K HVI P +    LDD+T F++NP+GRFVIGGP GDAGLTGRKII+DTYGG+  HGGG FSGKDPTKVDRS AY  R  AK+IVA+GLA++C
Sbjct:  143 TDTYMPLPIFLSHQLAKRLADVRKDEILDYLRPDGKVQVTVEYGEDDK---PRRIDTIVVSTQHAEDVELAQIEKDIKTHVIYPTVDKALLDDETKFYINPTGRFVIGGPQGDAGLTGRKIIVDTYGGYARHGGGCFSGKDPTKVDRSAAYAARYVAKNIVAAGLAKQC 308          
BLAST of FC930974 vs. ExPASy Swiss-Prot
Match: METK_RHOBA (S-adenosylmethionine synthetase OS=Rhodopirellula baltica GN=metK PE=3 SV=1)

HSP 1 Score: 195.282 bits (495), Expect = 1.388e-49
Identity = 95/169 (56.21%), Postives = 120/169 (71.01%), Query Frame = 3
Query:    3 TPELMPLSHVLATKLGAKLTEVRKNGTCPWLRPDGKTQVTVEYYNENGAMVPVRVHTVLISTQHDETVTNDEIAADLKQHVIKPVIPDKYLDDKTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTYGGWXAHGGGAFSGKDPTKVDRSGAYIVRQAAKSIVASGLARRC 509
            TPELMPL   L+ ++  ++TE R N    WLRPD K+QVTVEY        PVR+  V++S QH   V++DEI   + ++V+KP IP +       +H+NP+G+F+IGGPHGD GLTGRKII+DTYGGW  HGGGAFSGKD TKVDRS AY+ R  AK+IVA+GLA RC
Sbjct:  137 TPELMPLPIALSHRIINRITEARFNKEVDWLRPDNKSQVTVEYDGNR----PVRIEAVVVSAQHGPDVSHDEIEKFVIENVVKPSIPAELDKGDIKYHINPTGKFIIGGPHGDCGLTGRKIIVDTYGGWGRHGGGAFSGKDSTKVDRSAAYMARYVAKNIVAAGLAERC 301          
BLAST of FC930974 vs. ExPASy Swiss-Prot
Match: METK_LACLM (S-adenosylmethionine synthetase OS=Lactococcus lactis subsp. cremoris (strain MG1363) GN=metK PE=3 SV=1)

HSP 1 Score: 194.897 bits (494), Expect = 1.813e-49
Identity = 101/166 (60.84%), Postives = 123/166 (74.10%), Query Frame = 3
Query:    3 TPELMPLSHVLATKLGAKLTEVRKNGTCPWLRPDGKTQVTVEYYNENGAMVPVRVHTVLISTQHDETVTNDEIAADLKQHVIKPVIPDKYLDDKTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTYGGWXAHGGGAFSGKDPTKVDRSGAYIVRQAAKSIVASGLA 500
            T E MPL+  L+ KL  KL ++RK+G   +LRPD K+QVTVEY N   A    RV TV+ISTQH  T TN+EI  D+   VIK +IP + LDD+T + +NP+GRFVIGGP GD+GLTGRKII+DTYGG+  HGGGAFSGKD TKVDRS +Y  R  AK+IVA+GLA
Sbjct:  144 TAEYMPLAISLSHKLVKKLADLRKSGEISYLRPDAKSQVTVEYDNNGKAK---RVDTVVISTQHAATATNEEIHDDVINKVIKAIIPAELLDDETKYFINPTGRFVIGGPQGDSGLTGRKIIVDTYGGYAPHGGGAFSGKDATKVDRSASYAARYVAKNIVAAGLA 306          
BLAST of FC930974 vs. ExPASy Swiss-Prot
Match: METK_LACF3 (S-adenosylmethionine synthetase OS=Lactobacillus fermentum (strain IFO 3956 / LMG 18251) GN=metK PE=3 SV=1)

HSP 1 Score: 194.897 bits (494), Expect = 1.813e-49
Identity = 98/168 (58.33%), Postives = 126/168 (75.00%), Query Frame = 3
Query:    3 TPELMPLSHVLATKLGAKLTEVRKNGTCPWLRPDGKTQVTVEYYNENGAMVPVRVHTVLISTQHDETVTNDEIAADLKQHVIKPVIPDKYLDDKTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTYGGWXAHGGGAFSGKDPTKVDRSGAYIVRQAAKSIVASGLARR 506
            TPE MPL  +L+ KL  ++  +RK+    +LRPD K +VTVEY  +     PVRV TV++STQHD  V+ ++I AD+K+ VIK VIP +YLDD+T + +NP+GRFVIGGP GDAGLTGRKII+DTYGG   HGGGAFSGKD TKVDRS +Y  R  AK++VA+G A++
Sbjct:  141 TPEYMPLPLILSHKLMRRIAILRKDKVIKYLRPDAKAEVTVEYDADGK---PVRVDTVVLSTQHDPDVSLEQIQADVKEQVIKAVIPAEYLDDQTKYFINPTGRFVIGGPQGDAGLTGRKIIVDTYGGAAHHGGGAFSGKDATKVDRSASYAARYIAKNLVAAGYAKK 305          
BLAST of FC930974 vs. ExPASy Swiss-Prot
Match: METK_DESOH (S-adenosylmethionine synthetase OS=Desulfococcus oleovorans (strain DSM 6200 / Hxd3) GN=metK PE=3 SV=1)

HSP 1 Score: 194.897 bits (494), Expect = 1.813e-49
Identity = 98/169 (57.99%), Postives = 125/169 (73.96%), Query Frame = 3
Query:    3 TPELMPLSHVLATKLGAKLTEVRKNGTCPWLRPDGKTQVTVEYYNENGAMVPVRVHTVLISTQHDETVTNDEIAADLKQHVIKPVIPDKYLDDKTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTYGGWXAHGGGAFSGKDPTKVDRSGAYIVRQAAKSIVASGLARRC 509
            TPELMP     A KL  +L +VRKNG   +LRPDGK+QVTV+Y  E+G   P R+ T++IS+QH   VT DE+   +   VI PVIP + LD++T + +NP+GRFV+GGP GD GLTGRKII+DTYGG   HGGG FSGKDP+KVDRS +Y+ R  AK+IVA+G+A+RC
Sbjct:  134 TPELMPAPISYAHKLTKQLADVRKNGVLDFLRPDGKSQVTVQY--EDGQ--PKRIDTIVISSQHSPDVTYDELKDRIIAEVILPVIPGELLDEQTKYFINPTGRFVVGGPMGDCGLTGRKIIVDTYGGMGRHGGGCFSGKDPSKVDRSASYMGRHVAKNIVAAGIAKRC 298          
BLAST of FC930974 vs. ExPASy Swiss-Prot
Match: METK2_YEAST (S-adenosylmethionine synthetase 2 OS=Saccharomyces cerevisiae GN=SAM2 PE=1 SV=3)

HSP 1 Score: 194.897 bits (494), Expect = 1.813e-49
Identity = 93/168 (55.36%), Postives = 124/168 (73.81%), Query Frame = 3
Query:    3 TPELMPLSHVLATKLGAKLTEVRKNGTCPWLRPDGKTQVTVEYYNENGAMVPVRVHTVLISTQHDETVTNDEIAADLKQHVIKPVIPDKYLDDKTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTYGGWXAHGGGAFSGKDPTKVDRSGAYIVRQAAKSIVASGLARR 506
            TPE +PL+ +LA KL   + + R++G+ PWLRPD KTQVTVEY ++NG  VP R+ TV+IS QH + ++  ++   L++ +++ VIP   LD+ T + + PSGRFVIGGP GDAGLTGRKII+D YGG  + GGGAFSGKD +KVDRS AY  R  AKS+VA+GL +R
Sbjct:  135 TPEGLPLTILLAHKLNMAMADARRDGSLPWLRPDTKTQVTVEYEDDNGRWVPKRIDTVVISAQHADEISTADLRTQLQKDIVEKVIPKDMLDENTKYFIQPSGRFVIGGPQGDAGLTGRKIIVDAYGGASSVGGGAFSGKDYSKVDRSAAYAARWVAKSLVAAGLCKR 302          
BLAST of FC930974 vs. ExPASy Swiss-Prot
Match: METK_NEIG2 (S-adenosylmethionine synthetase OS=Neisseria gonorrhoeae (strain NCCP11945) GN=metK PE=3 SV=1)

HSP 1 Score: 194.512 bits (493), Expect = 2.368e-49
Identity = 93/169 (55.03%), Postives = 126/169 (74.56%), Query Frame = 3
Query:    3 TPELMPLSHVLATKLGAKLTEVRKNGTCPWLRPDGKTQVTVEYYNENGAMVPVRVHTVLISTQHDETVTNDEIAADLKQHVIKPVIPDKYLDDKTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTYGGWXAHGGGAFSGKDPTKVDRSGAYIVRQAAKSIVASGLARRC 509
            TP LMP +   + +L  + +E+RK+G  PWLRPD K Q+TV Y +E G +   R+ TV++STQHD  ++++E++  + + +IKPV+P + L D+T + +NP+GRFVIGGP GD GLTGRKII+DTYGG   HGGGAFSGKDP+KVDRS AY  R  AK+IVA+GLA +C
Sbjct:  133 TPTLMPFAIYYSHRLMQRQSELRKDGRLPWLRPDAKAQLTVVYDSETGKVK--RIDTVVLSTQHDPAISHEELSKAVIEQIIKPVLPPELLTDETKYLINPTGRFVIGGPQGDCGLTGRKIIVDTYGGAAPHGGGAFSGKDPSKVDRSAAYACRYVAKNIVAAGLATQC 299          
BLAST of FC930974 vs. ExPASy Swiss-Prot
Match: METK_GEOUR (S-adenosylmethionine synthetase OS=Geobacter uraniireducens (strain Rf4) GN=metK PE=3 SV=1)

HSP 1 Score: 194.512 bits (493), Expect = 2.368e-49
Identity = 95/169 (56.21%), Postives = 127/169 (75.15%), Query Frame = 3
Query:    3 TPELMPLSHVLATKLGAKLTEVRKNGTCPWLRPDGKTQVTVEYYNENGAMVPVRVHTVLISTQHDETVTNDEIAADLKQHVIKPVIPDKYLDDKTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTYGGWXAHGGGAFSGKDPTKVDRSGAYIVRQAAKSIVASGLARRC 509
            TPELMP+S +L+ KL  KL +VRK+G   +LRPD K+QV+++Y N+     PV V TV+IS+QH   V+ + I   + + V+K +IP++ +D KT F +NP+GRFVIGGP GD GLTGRKII+D+YGG  AHGGGAFSGKDP+KVDRS AY+ R  AK++VA+GL  +C
Sbjct:  135 TPELMPMSILLSHKLVKKLADVRKSGVLDFLRPDSKSQVSIQYINDR----PVHVDTVVISSQHTPEVSYETIKEGIIEEVVKKIIPEELMDAKTRFLINPTGRFVIGGPMGDCGLTGRKIIVDSYGGHGAHGGGAFSGKDPSKVDRSAAYMGRYVAKNLVAAGLCEKC 299          
BLAST of FC930974 vs. ExPASy Swiss-Prot
Match: METK_THET8 (S-adenosylmethionine synthetase OS=Thermus thermophilus (strain HB8 / ATCC 27634 / DSM 579) GN=metK PE=3 SV=1)

HSP 1 Score: 194.126 bits (492), Expect = 3.092e-49
Identity = 98/171 (57.31%), Postives = 122/171 (71.35%), Query Frame = 3
Query:    3 TPELMPLSHVLATKLGAKLTEVRKNGTCPWLRPDGKTQVTVEYYNENGAMVPVRVHTVLISTQHDETVTNDEIAADLKQHVIKPVIPDKYLDD-KTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTYGGWXAHGGGAFSGKDPTKVDRSGAYIVRQAAKSIVASGLARRCI 512
            TPELMPL   LA +L  +L EVRK G  P+LRPDGK QVTV Y  +     P+ V TV++S QH   V  +++  DL + V++  IP +YL D +T + +NPSGRF++GGPH D GLTGRKII+DTYGG   HGGGAFSGKDPTKVDRS +Y  R  AK+IVA+GLARR +
Sbjct:  142 TPELMPLPITLAHRLTMRLAEVRKTGLLPYLRPDGKAQVTVVYEGDK----PLYVKTVVVSAQHSPEVEQEQLREDLIREVVRQAIPPEYLKDGETEYLINPSGRFILGGPHADTGLTGRKIIVDTYGGAVPHGGGAFSGKDPTKVDRSASYYARYMAKNIVAAGLARRAL 308          
BLAST of FC930974 vs. ExPASy Swiss-Prot
Match: METK_THET2 (S-adenosylmethionine synthetase OS=Thermus thermophilus (strain HB27 / ATCC BAA-163 / DSM 7039) GN=metK PE=3 SV=2)

HSP 1 Score: 194.126 bits (492), Expect = 3.092e-49
Identity = 98/171 (57.31%), Postives = 122/171 (71.35%), Query Frame = 3
Query:    3 TPELMPLSHVLATKLGAKLTEVRKNGTCPWLRPDGKTQVTVEYYNENGAMVPVRVHTVLISTQHDETVTNDEIAADLKQHVIKPVIPDKYLDD-KTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTYGGWXAHGGGAFSGKDPTKVDRSGAYIVRQAAKSIVASGLARRCI 512
            TPELMPL   LA +L  +L EVRK G  P+LRPDGK QVTV Y  +     P+ V TV++S QH   V  +++  DL + V++  IP +YL D +T + +NPSGRF++GGPH D GLTGRKII+DTYGG   HGGGAFSGKDPTKVDRS +Y  R  AK+IVA+GLARR +
Sbjct:  142 TPELMPLPITLAHRLTMRLAEVRKTGLLPYLRPDGKAQVTVVYEGDK----PLYVKTVVVSAQHSPEVEQEQLREDLIREVVRQAIPPEYLKDGETEYLINPSGRFILGGPHADTGLTGRKIIVDTYGGAVPHGGGAFSGKDPTKVDRSASYYARYMAKNIVAAGLARRAL 308          
The following BLAST results are available for this feature:
BLAST of FC930974 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
METK_STAEQ1.388e-4957.40S-adenosylmethionine synthetase OS=Staphylococcus ... [more]
METK_RHOBA1.388e-4956.21S-adenosylmethionine synthetase OS=Rhodopirellula ... [more]
METK_LACLM1.813e-4960.84S-adenosylmethionine synthetase OS=Lactococcus lac... [more]
METK_LACF31.813e-4958.33S-adenosylmethionine synthetase OS=Lactobacillus f... [more]
METK_DESOH1.813e-4957.99S-adenosylmethionine synthetase OS=Desulfococcus o... [more]
METK2_YEAST1.813e-4955.36S-adenosylmethionine synthetase 2 OS=Saccharomyces... [more]
METK_NEIG22.368e-4955.03S-adenosylmethionine synthetase OS=Neisseria gonor... [more]
METK_GEOUR2.368e-4956.21S-adenosylmethionine synthetase OS=Geobacter urani... [more]
METK_THET83.092e-4957.31S-adenosylmethionine synthetase OS=Thermus thermop... [more]
METK_THET23.092e-4957.31S-adenosylmethionine synthetase OS=Thermus thermop... [more]

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Properties
Property NameValue
Genbank descriptionC34100A09EF PostHarvP1 Citrus clementina cDNA clone C34100A09, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC930974 ID=FC930974; Name=FC930974; organism=Citrus clementina; type=EST; length=513bp
GGACTCCTGAGTTGATGCCTTTGAGTCATGTGCTTGCAACAAAGCTTGGT
GCTAAGCTTACAGAAGTGAGGAAGAATGGGACCTGTCCGTGGCTGAGGCC
AGATGGCAAAACACAAGTCACTGTTGAGTATTACAATGAGAATGGCGCCA
TGGTTCCTGTTCGTGTCCATACTGTGCTCATCTCAACTCAGCACGATGAG
ACTGTAACTAATGATGAGATTGCTGCAGATCTCAAGCAACATGTGATCAA
GCCTGTGATTCCTGACAAGTACTTGGATGACAAAACTATTTTCCATCTTA
ACCCATCTGGCCGTTTTGTGATTGGTGGCCCTCACGGTGATGCTGGGCTC
ACCGGCCGGAAGATTATTATTGATACTTATGGTGGCTGGNGGGCACACGG
TGGTGGGGCTTTCTCAGGGAAAGATCCTACCAAGGTTGATAGAAGCGGTG
CTTACATTGTAAGGCAAGCTGCTAAGAGTATTGTGGCAAGCGGGCTTGCC
AGGAGATGCATTG
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