FC930974

Overview
NameFC930974
Unique NameFC930974
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length513
Libraries
Library NameType
PostHarvP1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC930974 vs. ExPASy Swiss-Prot
Match: METK_NEIG1 (S-adenosylmethionine synthetase OS=Neisseria gonorrhoeae (strain ATCC 700825 / FA 1090) GN=metK PE=3 SV=2)

HSP 1 Score: 194.126 bits (492), Expect = 3.092e-49
Identity = 93/169 (55.03%), Postives = 125/169 (73.96%), Query Frame = 3
Query:    3 TPELMPLSHVLATKLGAKLTEVRKNGTCPWLRPDGKTQVTVEYYNENGAMVPVRVHTVLISTQHDETVTNDEIAADLKQHVIKPVIPDKYLDDKTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTYGGWXAHGGGAFSGKDPTKVDRSGAYIVRQAAKSIVASGLARRC 509
            TP LMP +   + +L  + +E+RK+G  PWLRPD K Q+TV Y +E G +   R+ TV++STQHD  ++ +E++  + + +IKPV+P + L D+T + +NP+GRFVIGGP GD GLTGRKII+DTYGG   HGGGAFSGKDP+KVDRS AY  R  AK+IVA+GLA +C
Sbjct:  133 TPTLMPFAIYYSHRLMQRQSELRKDGRLPWLRPDAKAQLTVVYDSETGKVK--RIDTVVLSTQHDPAISQEELSKAVIEQIIKPVLPPELLTDETKYLINPTGRFVIGGPQGDCGLTGRKIIVDTYGGAAPHGGGAFSGKDPSKVDRSAAYACRYVAKNIVAAGLATQC 299          
BLAST of FC930974 vs. ExPASy Swiss-Prot
Match: METK_MOOTA (S-adenosylmethionine synthetase OS=Moorella thermoacetica (strain ATCC 39073) GN=metK PE=3 SV=1)

HSP 1 Score: 194.126 bits (492), Expect = 3.092e-49
Identity = 100/169 (59.17%), Postives = 122/169 (72.19%), Query Frame = 3
Query:    3 TPELMPLSHVLATKLGAKLTEVRKNGTCPWLRPDGKTQVTVEYYNENGAMVPVRVHTVLISTQHDETVTNDEIAADLKQHVIKPVIPDKYLDDKTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTYGGWXAHGGGAFSGKDPTKVDRSGAYIVRQAAKSIVASGLARRC 509
            TPE MP+   LA  L  +L  VRK    P+LRPDGK+QVTVEY  E+G   PVRV TV+ISTQH   +    +  ++ + VIKPVIP + LD++T + +NP+GRFVIGGP GD GLTGRK+I+DTYGG   HGGGA SGKDPTKVDRS AY  R  AK++VA+GLA RC
Sbjct:  141 TPEFMPMPIALAHALTRRLAAVRKERILPYLRPDGKSQVTVEY--EDGR--PVRVDTVVISTQHRPDIDMATLRDEVLETVIKPVIPAEMLDNRTRYFINPTGRFVIGGPQGDTGLTGRKLIVDTYGGMARHGGGALSGKDPTKVDRSAAYAARYVAKNVVAAGLADRC 305          
BLAST of FC930974 vs. ExPASy Swiss-Prot
Match: METK_MYCVP (S-adenosylmethionine synthetase OS=Mycobacterium vanbaalenii (strain DSM 7251 / PYR-1) GN=metK PE=3 SV=1)

HSP 1 Score: 193.741 bits (491), Expect = 4.039e-49
Identity = 101/173 (58.38%), Postives = 126/173 (72.83%), Query Frame = 3
Query:    3 TPELMPLSHVLATKLGAKLTEVRKNGTCPWLRPDGKTQVTVEYYNENGAMVPVRVHTVLISTQHDETVT-NDEIAADLKQHVIKPVIPDKYLDDKTI----FHLNPSGRFVIGGPHGDAGLTGRKIIIDTYGGWXAHGGGAFSGKDPTKVDRSGAYIVRQAAKSIVASGLARR 506
            TPELMPL   LA +L  KLTEVRKNGT  +LRPDGKTQVTV+Y        PVR+ TV++STQH + +    ++A ++KQHVI  V+ +   D          +NP+G+FV+GGP GDAGLTGRKII+DTYGGW  HGGGAFSGKDP+KVDRS AY +R  AK++VA+GLA+R
Sbjct:  145 TPELMPLPIALAHRLSRKLTEVRKNGTLDYLRPDGKTQVTVQY----DGTTPVRLDTVVLSTQHADGIDLESQLAPEIKQHVIDAVLTELGHDTLDTSAPRILVNPTGKFVLGGPMGDAGLTGRKIIVDTYGGWARHGGGAFSGKDPSKVDRSAAYAMRWVAKNVVAAGLAQR 313          
BLAST of FC930974 vs. ExPASy Swiss-Prot
Match: METK_LACPL (S-adenosylmethionine synthetase OS=Lactobacillus plantarum GN=metK PE=3 SV=1)

HSP 1 Score: 193.741 bits (491), Expect = 4.039e-49
Identity = 98/166 (59.04%), Postives = 120/166 (72.29%), Query Frame = 3
Query:    3 TPELMPLSHVLATKLGAKLTEVRKNGTCPWLRPDGKTQVTVEYYNENGAMVPVRVHTVLISTQHDETVTNDEIAADLKQHVIKPVIPDKYLDDKTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTYGGWXAHGGGAFSGKDPTKVDRSGAYIVRQAAKSIVASGLA 500
            TPELMPL   L+ +L  K+  +RK+GT  WLRPD K QVTVEY  +N    P R+ TV++STQHD  V  D I   +   VIK V+P   LDD+T + +NP+GRFVIGGP GDAGLTGRK+I+DTYGG+  HGGGAFSGKD TKVDRS +Y  R  AK++VA+GLA
Sbjct:  141 TPELMPLPIALSHRLMRKIAALRKDGTIKWLRPDAKAQVTVEYDEDNQ---PKRIDTVVLSTQHDPDVDLDTIRQTVIDQVIKAVLPADLLDDQTKYLVNPTGRFVIGGPQGDAGLTGRKVIVDTYGGFAHHGGGAFSGKDATKVDRSASYAARYIAKNVVAAGLA 303          
BLAST of FC930974 vs. ExPASy Swiss-Prot
Match: METK_GEOMG (S-adenosylmethionine synthetase OS=Geobacter metallireducens (strain GS-15 / ATCC 53774 / DSM 7210) GN=metK PE=3 SV=1)

HSP 1 Score: 193.741 bits (491), Expect = 4.039e-49
Identity = 96/169 (56.80%), Postives = 124/169 (73.37%), Query Frame = 3
Query:    3 TPELMPLSHVLATKLGAKLTEVRKNGTCPWLRPDGKTQVTVEYYNENGAMVPVRVHTVLISTQHDETVTNDEIAADLKQHVIKPVIPDKYLDDKTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTYGGWXAHGGGAFSGKDPTKVDRSGAYIVRQAAKSIVASGLARRC 509
            TPELMP+S   A KL  KL EVRKNG   +LRPD K+QV+VEY ++     PVRV TV+IS+QH   V+ + I   + + V+K +IP   +D++T   +NP+GRFV+GGP GD GLTGRKII+D+YGG  AHGGGAFSGKDP+KVDRS AY+ R  AK++VA+GL  +C
Sbjct:  135 TPELMPMSITYAHKLTQKLAEVRKNGVLDFLRPDSKSQVSVEYVDDK----PVRVDTVVISSQHTPEVSYEAIKEGIIEEVVKKIIPAHLMDERTRMLINPTGRFVVGGPMGDCGLTGRKIIVDSYGGHGAHGGGAFSGKDPSKVDRSAAYMGRYVAKNLVAAGLCEKC 299          
BLAST of FC930974 vs. ExPASy Swiss-Prot
Match: METK_CORK4 (S-adenosylmethionine synthetase OS=Corynebacterium kroppenstedtii (strain DSM 44385 / CCUG 35717) GN=metK PE=3 SV=1)

HSP 1 Score: 193.741 bits (491), Expect = 4.039e-49
Identity = 100/173 (57.80%), Postives = 123/173 (71.10%), Query Frame = 3
Query:    3 TPELMPLSHVLATKLGAKLTEVRKNGTCPWLRPDGKTQVTVEYYNENGAMVPVRVHTVLISTQHDETVTNDEIAADLKQHVIKPVIPD----KYLDDKTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTYGGWXAHGGGAFSGKDPTKVDRSGAYIVRQAAKSIVASGLARRC 509
            TPE MPL   LA +L  +LT VRK+   P LRPDGKTQVT+ Y ++N    P+R+ T++ISTQHD  V+   +   L+ +VI PVI D      +DD+    +NPSG FV+GGP GDAGLTGRKII+DTYGG   HGGGAFSGKDP+KVDRS AY +R  AK+IVA+GLA RC
Sbjct:  141 TPEYMPLPIALAHRLARRLTAVRKDDIVPHLRPDGKTQVTLAYNDDNN---PIRIDTIVISTQHDPGVSRQWLEEQLRTNVITPVIKDAGVENLVDDELTVLINPSGSFVVGGPMGDAGLTGRKIIVDTYGGMARHGGGAFSGKDPSKVDRSAAYAMRWVAKNIVAAGLADRC 310          
BLAST of FC930974 vs. ExPASy Swiss-Prot
Match: METK_BIFLD (S-adenosylmethionine synthetase OS=Bifidobacterium longum (strain DJO10A) GN=metK PE=3 SV=1)

HSP 1 Score: 193.741 bits (491), Expect = 4.039e-49
Identity = 103/172 (59.88%), Postives = 125/172 (72.67%), Query Frame = 3
Query:    3 TPELMPLSHVLATKLGAKLTEVRKNGTCPWLRPDGKTQVTVEYYNENGAMVPVRVHTVLISTQHDETVTNDEIAADLKQHVIKPVIPD----KYLDDKTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTYGGWXAHGGGAFSGKDPTKVDRSGAYIVRQAAKSIVASGLARR 506
            TP LMPL   LA +L  +LTEVRK+G  P LRPDGKTQVT+EY +++    PVR+ TVLISTQHD  VT D +A +LK+HVI PV+ +    K   D     +NP+G F++GGP  DAGLTGRKII+DTYGG   HGGGAFSGKDP+KVDRS AY  R  AK+IVA+GLA +
Sbjct:  145 TPTLMPLPIYLAHRLAFRLTEVRKSGEVPHLRPDGKTQVTIEYDDDDK---PVRLDTVLISTQHDPEVTQDWLAVELKKHVIDPVLDEVLGSKVPHDNYRQLVNPTGSFILGGPAADAGLTGRKIIVDTYGGAAHHGGGAFSGKDPSKVDRSAAYATRWVAKNIVAAGLAHK 313          
BLAST of FC930974 vs. ExPASy Swiss-Prot
Match: METK_BDEBA (S-adenosylmethionine synthetase OS=Bdellovibrio bacteriovorus GN=metK PE=3 SV=1)

HSP 1 Score: 193.741 bits (491), Expect = 4.039e-49
Identity = 99/170 (58.24%), Postives = 122/170 (71.76%), Query Frame = 3
Query:    3 TPELMPLSHVLATKLGAKLTEVRKNGTCPWLRPDGKTQVTVEYYNENGAMVPVRVHTVLISTQHDETVTNDEIAADLKQHVIKPVIPDKYLDDKTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTYGGWXAHGGGAFSGKDPTKVDRSGAYIVRQAAKSIVASGLARRCI 512
            TPELMPLS  ++ KL   L  +RK     WLRPD K+QVTV+Y  ENG  +  R+  V+ISTQH ++V+N  I   + + +IK  IP  ++D KT F +NP+GRFV GGP GDAGLTGRKII+DTYGG  AHGGGAFSGKDP+KVDRS AY  R  AK+IV +GLA RC+
Sbjct:  131 TPELMPLSIAMSHKLVKDLAALRKANKVDWLRPDAKSQVTVQY--ENG--IAKRIDAVVISTQHADSVSNSTIQEFITEELIKKSIPGNWIDSKTKFFINPTGRFVTGGPMGDAGLTGRKIIVDTYGGHGAHGGGAFSGKDPSKVDRSAAYASRHIAKNIVGAGLAERCL 296          
BLAST of FC930974 vs. ExPASy Swiss-Prot
Match: METK_PETMO (S-adenosylmethionine synthetase OS=Petrotoga mobilis (strain DSM 10674 / SJ95) GN=metK PE=3 SV=1)

HSP 1 Score: 193.356 bits (490), Expect = 5.275e-49
Identity = 97/166 (58.43%), Postives = 116/166 (69.88%), Query Frame = 3
Query:    3 TPELMPLSHVLATKLGAKLTEVRKNGTCPWLRPDGKTQVTVEYYNENGAMVPVRVHTVLISTQHDETVTNDEIAADLKQHVIKPVIPDKYLDDKTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTYGGWXAHGGGAFSGKDPTKVDRSGAYIVRQAAKSIVASGLA 500
            T   MPL  +LA +L  +L +VRK+ T  +LRPDGKTQVTVEY   N    PV V TVLIS QH   ++  E+   +K+HVI PVIP+  +   T   +NP+GRFVIGGP  D GLTGRKII+DTYGGW  HGGGAFSGKDPTKVDRS  Y+ R  AK++VASG A
Sbjct:  146 TDAYMPLPILLAHRLAKRLADVRKSNTLDFLRPDGKTQVTVEYDENNN---PVGVETVLISAQHSPDISRQELEEAIKEHVITPVIPENLVTKDTKILVNPTGRFVIGGPQADTGLTGRKIIVDTYGGWAPHGGGAFSGKDPTKVDRSATYMARYVAKNLVASGAA 308          
BLAST of FC930974 vs. ExPASy Swiss-Prot
Match: METK_MYCGI (S-adenosylmethionine synthetase OS=Mycobacterium gilvum (strain PYR-GCK) GN=metK PE=3 SV=1)

HSP 1 Score: 193.356 bits (490), Expect = 5.275e-49
Identity = 102/175 (58.29%), Postives = 128/175 (73.14%), Query Frame = 3
Query:    3 TPELMPLSHVLATKLGAKLTEVRKNGTCPWLRPDGKTQVTVEYYNENGAMVPVRVHTVLISTQHDETVTND-EIAADLKQHVIKPVIPDKYLDDKTI------FHLNPSGRFVIGGPHGDAGLTGRKIIIDTYGGWXAHGGGAFSGKDPTKVDRSGAYIVRQAAKSIVASGLARR 506
            TPELMPL   LA +L  KLTEVRKNGT  +LRPDGKTQVTV+Y        PVR+ TV++STQH + +  D ++  ++KQHVI  V+ +  L  +T+        +NP+G+FV+GGP GDAGLTGRKII+DTYGGW  HGGGAFSGKDP+KVDRS AY +R  AK++VA+GLA R
Sbjct:  145 TPELMPLPIALAHRLSRKLTEVRKNGTLDYLRPDGKTQVTVQY----DGTTPVRLDTVVLSTQHADGIELDSQLEPEIKQHVIDAVLTE--LGHQTLDTSNPRILVNPTGKFVLGGPMGDAGLTGRKIIVDTYGGWARHGGGAFSGKDPSKVDRSAAYAMRWVAKNVVAAGLAER 313          
The following BLAST results are available for this feature:
BLAST of FC930974 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
METK_NEIG13.092e-4955.03S-adenosylmethionine synthetase OS=Neisseria gonor... [more]
METK_MOOTA3.092e-4959.17S-adenosylmethionine synthetase OS=Moorella thermo... [more]
METK_MYCVP4.039e-4958.38S-adenosylmethionine synthetase OS=Mycobacterium v... [more]
METK_LACPL4.039e-4959.04S-adenosylmethionine synthetase OS=Lactobacillus p... [more]
METK_GEOMG4.039e-4956.80S-adenosylmethionine synthetase OS=Geobacter metal... [more]
METK_CORK44.039e-4957.80S-adenosylmethionine synthetase OS=Corynebacterium... [more]
METK_BIFLD4.039e-4959.88S-adenosylmethionine synthetase OS=Bifidobacterium... [more]
METK_BDEBA4.039e-4958.24S-adenosylmethionine synthetase OS=Bdellovibrio ba... [more]
METK_PETMO5.275e-4958.43S-adenosylmethionine synthetase OS=Petrotoga mobil... [more]
METK_MYCGI5.275e-4958.29S-adenosylmethionine synthetase OS=Mycobacterium g... [more]

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Properties
Property NameValue
Genbank descriptionC34100A09EF PostHarvP1 Citrus clementina cDNA clone C34100A09, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC930974 ID=FC930974; Name=FC930974; organism=Citrus clementina; type=EST; length=513bp
GGACTCCTGAGTTGATGCCTTTGAGTCATGTGCTTGCAACAAAGCTTGGT
GCTAAGCTTACAGAAGTGAGGAAGAATGGGACCTGTCCGTGGCTGAGGCC
AGATGGCAAAACACAAGTCACTGTTGAGTATTACAATGAGAATGGCGCCA
TGGTTCCTGTTCGTGTCCATACTGTGCTCATCTCAACTCAGCACGATGAG
ACTGTAACTAATGATGAGATTGCTGCAGATCTCAAGCAACATGTGATCAA
GCCTGTGATTCCTGACAAGTACTTGGATGACAAAACTATTTTCCATCTTA
ACCCATCTGGCCGTTTTGTGATTGGTGGCCCTCACGGTGATGCTGGGCTC
ACCGGCCGGAAGATTATTATTGATACTTATGGTGGCTGGNGGGCACACGG
TGGTGGGGCTTTCTCAGGGAAAGATCCTACCAAGGTTGATAGAAGCGGTG
CTTACATTGTAAGGCAAGCTGCTAAGAGTATTGTGGCAAGCGGGCTTGCC
AGGAGATGCATTG
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