FC930974

Overview
NameFC930974
Unique NameFC930974
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length513
Libraries
Library NameType
PostHarvP1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC930974 vs. ExPASy Swiss-Prot
Match: METK_LACLS (S-adenosylmethionine synthetase OS=Lactococcus lactis subsp. cremoris (strain SK11) GN=metK PE=3 SV=1)

HSP 1 Score: 192.971 bits (489), Expect = 6.889e-49
Identity = 100/166 (60.24%), Postives = 122/166 (73.49%), Query Frame = 3
Query:    3 TPELMPLSHVLATKLGAKLTEVRKNGTCPWLRPDGKTQVTVEYYNENGAMVPVRVHTVLISTQHDETVTNDEIAADLKQHVIKPVIPDKYLDDKTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTYGGWXAHGGGAFSGKDPTKVDRSGAYIVRQAAKSIVASGLA 500
            T E MPL+  L+ KL  KL ++RK+G   +LRPD K+QVTVEY N   A    RV TV+ISTQH    TN+EI  D+   VIK +IP + LDD+T + +NP+GRFVIGGP GD+GLTGRKII+DTYGG+  HGGGAFSGKD TKVDRS +Y  R  AK+IVA+GLA
Sbjct:  144 TAEYMPLAISLSHKLVKKLADLRKSGEISYLRPDAKSQVTVEYDNNGKAK---RVDTVVISTQHAAAATNEEIHDDVINKVIKAIIPAELLDDETKYFINPTGRFVIGGPQGDSGLTGRKIIVDTYGGYAPHGGGAFSGKDATKVDRSASYAARYVAKNIVAAGLA 306          
BLAST of FC930974 vs. ExPASy Swiss-Prot
Match: METK_BIFLI (S-adenosylmethionine synthetase OS=Bifidobacterium longum subsp. infantis (strain ATCC 15697 / DSM 20088 / NCTC 11817 / S12) GN=metK PE=3 SV=1)

HSP 1 Score: 192.971 bits (489), Expect = 6.889e-49
Identity = 103/172 (59.88%), Postives = 124/172 (72.09%), Query Frame = 3
Query:    3 TPELMPLSHVLATKLGAKLTEVRKNGTCPWLRPDGKTQVTVEYYNENGAMVPVRVHTVLISTQHDETVTNDEIAADLKQHVIKPVIPD----KYLDDKTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTYGGWXAHGGGAFSGKDPTKVDRSGAYIVRQAAKSIVASGLARR 506
            TP LMPL   LA +L  +LTEVRK+G  P LRPDGKTQVT+EY + +    PVR+ TVLISTQHD  VT D +A +LK+HVI PV+ +    K   D     +NP+G F++GGP  DAGLTGRKII+DTYGG   HGGGAFSGKDP+KVDRS AY  R  AK+IVA+GLA +
Sbjct:  145 TPTLMPLPIYLAHRLAFRLTEVRKSGEVPHLRPDGKTQVTIEYDDNDK---PVRLDTVLISTQHDPEVTQDWLAVELKKHVIDPVLDEVLGSKVPHDNYRQLVNPTGSFILGGPAADAGLTGRKIIVDTYGGAAHHGGGAFSGKDPSKVDRSAAYATRWVAKNIVAAGLAHK 313          
BLAST of FC930974 vs. ExPASy Swiss-Prot
Match: METK_BIFLO (S-adenosylmethionine synthetase OS=Bifidobacterium longum GN=metK PE=3 SV=1)

HSP 1 Score: 192.586 bits (488), Expect = 8.998e-49
Identity = 103/172 (59.88%), Postives = 124/172 (72.09%), Query Frame = 3
Query:    3 TPELMPLSHVLATKLGAKLTEVRKNGTCPWLRPDGKTQVTVEYYNENGAMVPVRVHTVLISTQHDETVTNDEIAADLKQHVIKPVIPD----KYLDDKTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTYGGWXAHGGGAFSGKDPTKVDRSGAYIVRQAAKSIVASGLARR 506
            TP LMPL   LA +L   LTEVRK+G  P LRPDGKTQVT+EY +++    PVR+ TVLISTQHD  VT D +A +LK+HVI PV+ +    K   D     +NP+G F++GGP  DAGLTGRKII+DTYGG   HGGGAFSGKDP+KVDRS AY  R  AK+IVA+GLA +
Sbjct:  145 TPTLMPLPIYLAHRLAFHLTEVRKSGEVPHLRPDGKTQVTIEYDDDDK---PVRLDTVLISTQHDPEVTQDWLAVELKKHVIDPVLDEVLGSKVPHDNYRQLVNPTGSFILGGPAADAGLTGRKIIVDTYGGAAHHGGGAFSGKDPSKVDRSAAYATRWVAKNIVAAGLAHK 313          
BLAST of FC930974 vs. ExPASy Swiss-Prot
Match: METK_NEIMA (S-adenosylmethionine synthetase OS=Neisseria meningitidis serogroup A GN=metK PE=3 SV=1)

HSP 1 Score: 192.2 bits (487), Expect = 1.175e-48
Identity = 94/169 (55.62%), Postives = 124/169 (73.37%), Query Frame = 3
Query:    3 TPELMPLSHVLATKLGAKLTEVRKNGTCPWLRPDGKTQVTVEYYNENGAMVPVRVHTVLISTQHDETVTNDEIAADLKQHVIKPVIPDKYLDDKTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTYGGWXAHGGGAFSGKDPTKVDRSGAYIVRQAAKSIVASGLARRC 509
            TP LMP +   + +L  + +E+RK+G  PWLRPD K Q+TV Y +E G +   R+ TV++STQHD +V  +E+   + + +IKPV+P + L D+T + +NP+GRFVIGGP GD GLTGRKII+DTYGG   HGGGAFSGKDP+KVDRS AY  R  AK+IVA+GLA +C
Sbjct:  133 TPTLMPFAIYYSHRLMQRQSELRKDGRLPWLRPDAKAQLTVVYDSETGKVK--RIDTVVLSTQHDPSVGYEELKNAVIEQIIKPVLPSELLTDETKYLINPTGRFVIGGPQGDCGLTGRKIIVDTYGGAAPHGGGAFSGKDPSKVDRSAAYACRYVAKNIVAAGLATQC 299          
BLAST of FC930974 vs. ExPASy Swiss-Prot
Match: METK_MYCPA (S-adenosylmethionine synthetase OS=Mycobacterium paratuberculosis GN=metK PE=3 SV=1)

HSP 1 Score: 192.2 bits (487), Expect = 1.175e-48
Identity = 98/173 (56.65%), Postives = 126/173 (72.83%), Query Frame = 3
Query:    3 TPELMPLSHVLATKLGAKLTEVRKNGTCPWLRPDGKTQVTVEYYNENGAMVPVRVHTVLISTQHDETVT-NDEIAADLKQHVIKPVIPDKYLD----DKTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTYGGWXAHGGGAFSGKDPTKVDRSGAYIVRQAAKSIVASGLARR 506
            TPE+MPL   LA +L  +LTEVRK+G  P+LRPDGKTQVT+EY ++    VPVR+ TV++STQH   +   + +  D+++ V+  V+ D   D      T   +NP+G+FV+GGP GDAGLTGRKII+DTYGGW  HGGGAFSGKDP+KVDRS AY +R  AK+IVA+GLA R
Sbjct:  146 TPEMMPLPIALAHRLSRRLTEVRKSGVLPYLRPDGKTQVTIEYEDD----VPVRLDTVVVSTQHAADIDLENTLTPDIREKVLNTVLDDLAHDTLDTSSTRLLVNPTGKFVVGGPMGDAGLTGRKIIVDTYGGWARHGGGAFSGKDPSKVDRSAAYAMRWVAKNIVAAGLAER 314          
BLAST of FC930974 vs. ExPASy Swiss-Prot
Match: METK_GEOSM (S-adenosylmethionine synthetase OS=Geobacter sp. (strain M21) GN=metK PE=3 SV=1)

HSP 1 Score: 192.2 bits (487), Expect = 1.175e-48
Identity = 95/169 (56.21%), Postives = 125/169 (73.96%), Query Frame = 3
Query:    3 TPELMPLSHVLATKLGAKLTEVRKNGTCPWLRPDGKTQVTVEYYNENGAMVPVRVHTVLISTQHDETVTNDEIAADLKQHVIKPVIPDKYLDDKTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTYGGWXAHGGGAFSGKDPTKVDRSGAYIVRQAAKSIVASGLARRC 509
            TPELMP+S +LA KL ++L +VRK G   +LRPD K+QV+++Y ++     PV V TV+IS+QH   V+ + I   + + V+K +IP   +D KT F +NP+GRFVIGGP GD GLTGRKII+D+YGG  AHGGGAFSGKDP+KVDRS AY+ R  AK++VASG+  RC
Sbjct:  135 TPELMPMSILLAHKLVSRLADVRKAGVLDFLRPDSKSQVSIQYIDDK----PVHVDTVVISSQHSPEVSYEMIKEGIIEEVVKKIIPANLMDSKTKFLINPTGRFVIGGPMGDCGLTGRKIIVDSYGGHGAHGGGAFSGKDPSKVDRSAAYMGRYVAKNLVASGVCERC 299          
BLAST of FC930974 vs. ExPASy Swiss-Prot
Match: METK_MYCTU (S-adenosylmethionine synthetase OS=Mycobacterium tuberculosis GN=metK PE=3 SV=2)

HSP 1 Score: 191.815 bits (486), Expect = 1.535e-48
Identity = 101/173 (58.38%), Postives = 128/173 (73.99%), Query Frame = 3
Query:    3 TPELMPLSHVLATKLGAKLTEVRKNGTCPWLRPDGKTQVTVEYYNENGAMVPVRVHTVLISTQHDETVTNDE-IAADLKQHVIKPVIPD---KYLDDKTIFHL-NPSGRFVIGGPHGDAGLTGRKIIIDTYGGWXAHGGGAFSGKDPTKVDRSGAYIVRQAAKSIVASGLARR 506
            TPELMPL   LA +L  +LTEVRKNG  P+LRPDGKTQVT+ Y +     VPVR+ TV+ISTQH   +  ++ +  D+++ V+  V+ D   + LD  T+  L NP+G+FV+GGP GDAGLTGRKII+DTYGGW  HGGGAFSGKDP+KVDRS AY +R  AK++VA+GLA R
Sbjct:  146 TPELMPLPIALAHRLSRRLTEVRKNGVLPYLRPDGKTQVTIAYEDN----VPVRLDTVVISTQHAADIDLEKTLDPDIREKVLNTVLDDLAHETLDASTVRVLVNPTGKFVLGGPMGDAGLTGRKIIVDTYGGWARHGGGAFSGKDPSKVDRSAAYAMRWVAKNVVAAGLAER 314          
BLAST of FC930974 vs. ExPASy Swiss-Prot
Match: METK_MYCTA (S-adenosylmethionine synthetase OS=Mycobacterium tuberculosis (strain ATCC 25177 / H37Ra) GN=metK PE=3 SV=1)

HSP 1 Score: 191.815 bits (486), Expect = 1.535e-48
Identity = 101/173 (58.38%), Postives = 128/173 (73.99%), Query Frame = 3
Query:    3 TPELMPLSHVLATKLGAKLTEVRKNGTCPWLRPDGKTQVTVEYYNENGAMVPVRVHTVLISTQHDETVTNDE-IAADLKQHVIKPVIPD---KYLDDKTIFHL-NPSGRFVIGGPHGDAGLTGRKIIIDTYGGWXAHGGGAFSGKDPTKVDRSGAYIVRQAAKSIVASGLARR 506
            TPELMPL   LA +L  +LTEVRKNG  P+LRPDGKTQVT+ Y +     VPVR+ TV+ISTQH   +  ++ +  D+++ V+  V+ D   + LD  T+  L NP+G+FV+GGP GDAGLTGRKII+DTYGGW  HGGGAFSGKDP+KVDRS AY +R  AK++VA+GLA R
Sbjct:  146 TPELMPLPIALAHRLSRRLTEVRKNGVLPYLRPDGKTQVTIAYEDN----VPVRLDTVVISTQHAADIDLEKTLDPDIREKVLNTVLDDLAHETLDASTVRVLVNPTGKFVLGGPMGDAGLTGRKIIVDTYGGWARHGGGAFSGKDPSKVDRSAAYAMRWVAKNVVAAGLAER 314          
BLAST of FC930974 vs. ExPASy Swiss-Prot
Match: METK_MYCBO (S-adenosylmethionine synthetase OS=Mycobacterium bovis GN=metK PE=3 SV=1)

HSP 1 Score: 191.815 bits (486), Expect = 1.535e-48
Identity = 101/173 (58.38%), Postives = 128/173 (73.99%), Query Frame = 3
Query:    3 TPELMPLSHVLATKLGAKLTEVRKNGTCPWLRPDGKTQVTVEYYNENGAMVPVRVHTVLISTQHDETVTNDE-IAADLKQHVIKPVIPD---KYLDDKTIFHL-NPSGRFVIGGPHGDAGLTGRKIIIDTYGGWXAHGGGAFSGKDPTKVDRSGAYIVRQAAKSIVASGLARR 506
            TPELMPL   LA +L  +LTEVRKNG  P+LRPDGKTQVT+ Y +     VPVR+ TV+ISTQH   +  ++ +  D+++ V+  V+ D   + LD  T+  L NP+G+FV+GGP GDAGLTGRKII+DTYGGW  HGGGAFSGKDP+KVDRS AY +R  AK++VA+GLA R
Sbjct:  146 TPELMPLPIALAHRLSRRLTEVRKNGVLPYLRPDGKTQVTIAYEDN----VPVRLDTVVISTQHAADIDLEKTLDPDIREKVLNTVLDDLAHETLDASTVRVLVNPTGKFVLGGPMGDAGLTGRKIIVDTYGGWARHGGGAFSGKDPSKVDRSAAYAMRWVAKNVVAAGLAER 314          
BLAST of FC930974 vs. ExPASy Swiss-Prot
Match: METK_IDILO (S-adenosylmethionine synthetase OS=Idiomarina loihiensis GN=metK PE=3 SV=1)

HSP 1 Score: 191.815 bits (486), Expect = 1.535e-48
Identity = 93/169 (55.03%), Postives = 121/169 (71.60%), Query Frame = 3
Query:    3 TPELMPLSHVLATKLGAKLTEVRKNGTCPWLRPDGKTQVTVEYYNENGAMVPVRVHTVLISTQHDETVTNDEIAADLKQHVIKPVIPDKYLDDKTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTYGGWXAHGGGAFSGKDPTKVDRSGAYIVRQAAKSIVASGLARRC 509
            T  LMP     A ++  + +EVR NGT  WLRPD K+Q+T  Y  ENG   PV + TV++STQH E +T + +   + + +IKPV+P++++   T FH+NP+GRFV+GGP GD GLTGRKII+DTYGG   HGGGAFSGKDP+KVDRS AY  R  AK++VA+GLA RC
Sbjct:  131 TSVLMPAPITYAHRVMQRQSEVRNNGTLDWLRPDAKSQLTFVY--ENGK--PVAIDTVVLSTQHREDITQETLREAVMEEIIKPVLPEQWVSKDTQFHINPTGRFVVGGPMGDCGLTGRKIIVDTYGGMARHGGGAFSGKDPSKVDRSAAYAARYVAKNLVAAGLAERC 295          
The following BLAST results are available for this feature:
BLAST of FC930974 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
METK_LACLS6.889e-4960.24S-adenosylmethionine synthetase OS=Lactococcus lac... [more]
METK_BIFLI6.889e-4959.88S-adenosylmethionine synthetase OS=Bifidobacterium... [more]
METK_BIFLO8.998e-4959.88S-adenosylmethionine synthetase OS=Bifidobacterium... [more]
METK_NEIMA1.175e-4855.62S-adenosylmethionine synthetase OS=Neisseria menin... [more]
METK_MYCPA1.175e-4856.65S-adenosylmethionine synthetase OS=Mycobacterium p... [more]
METK_GEOSM1.175e-4856.21S-adenosylmethionine synthetase OS=Geobacter sp. (... [more]
METK_MYCTU1.535e-4858.38S-adenosylmethionine synthetase OS=Mycobacterium t... [more]
METK_MYCTA1.535e-4858.38S-adenosylmethionine synthetase OS=Mycobacterium t... [more]
METK_MYCBO1.535e-4858.38S-adenosylmethionine synthetase OS=Mycobacterium b... [more]
METK_IDILO1.535e-4855.03S-adenosylmethionine synthetase OS=Idiomarina loih... [more]

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Properties
Property NameValue
Genbank descriptionC34100A09EF PostHarvP1 Citrus clementina cDNA clone C34100A09, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC930974 ID=FC930974; Name=FC930974; organism=Citrus clementina; type=EST; length=513bp
GGACTCCTGAGTTGATGCCTTTGAGTCATGTGCTTGCAACAAAGCTTGGT
GCTAAGCTTACAGAAGTGAGGAAGAATGGGACCTGTCCGTGGCTGAGGCC
AGATGGCAAAACACAAGTCACTGTTGAGTATTACAATGAGAATGGCGCCA
TGGTTCCTGTTCGTGTCCATACTGTGCTCATCTCAACTCAGCACGATGAG
ACTGTAACTAATGATGAGATTGCTGCAGATCTCAAGCAACATGTGATCAA
GCCTGTGATTCCTGACAAGTACTTGGATGACAAAACTATTTTCCATCTTA
ACCCATCTGGCCGTTTTGTGATTGGTGGCCCTCACGGTGATGCTGGGCTC
ACCGGCCGGAAGATTATTATTGATACTTATGGTGGCTGGNGGGCACACGG
TGGTGGGGCTTTCTCAGGGAAAGATCCTACCAAGGTTGATAGAAGCGGTG
CTTACATTGTAAGGCAAGCTGCTAAGAGTATTGTGGCAAGCGGGCTTGCC
AGGAGATGCATTG
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