FC930974

Overview
NameFC930974
Unique NameFC930974
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length513
Libraries
Library NameType
PostHarvP1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC930974 vs. ExPASy Swiss-Prot
Match: METK_ALTMD (S-adenosylmethionine synthetase OS=Alteromonas macleodii (strain DSM 17117 / Deep ecotype) GN=metK PE=3 SV=1)

HSP 1 Score: 191.815 bits (486), Expect = 1.535e-48
Identity = 92/169 (54.44%), Postives = 121/169 (71.60%), Query Frame = 3
Query:    3 TPELMPLSHVLATKLGAKLTEVRKNGTCPWLRPDGKTQVTVEYYNENGAMVPVRVHTVLISTQHDETVTNDEIAADLKQHVIKPVIPDKYLDDKTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTYGGWXAHGGGAFSGKDPTKVDRSGAYIVRQAAKSIVASGLARRC 509
            T  LMP     + +L  K  EVRK+G   WLRPD K+Q+T +Y N+     PV +  V++STQH ++V+ + +   + + +IKPV+P +++D  T FH+NP+GRFVIGGP GD GLTGRKII+DTYGG   HGGGAFSGKDP+KVDRS AY  R  AK+IVA+GLA+RC
Sbjct:  131 TDVLMPAPITYSHRLVQKQAEVRKSGKLDWLRPDAKSQITFKYENDK----PVGIDAVVLSTQHCDSVSTETVREAVMEEIIKPVLPSEWIDGNTRFHINPTGRFVIGGPMGDCGLTGRKIIVDTYGGMARHGGGAFSGKDPSKVDRSAAYAGRYVAKNIVAAGLAKRC 295          
BLAST of FC930974 vs. ExPASy Swiss-Prot
Match: METK_SYNP2 (S-adenosylmethionine synthetase OS=Synechococcus sp. (strain ATCC 27264 / PCC 7002 / PR-6) GN=metK PE=3 SV=1)

HSP 1 Score: 191.43 bits (485), Expect = 2.004e-48
Identity = 106/179 (59.22%), Postives = 126/179 (70.39%), Query Frame = 3
Query:    3 TPELMPLSHVLATKLGAKLTEVRKNGTCPWLRPDGKTQVTVEYYNENGAMVPVRVHTVLISTQHDETV--------TNDEIAADLKQHVIKPVIPDKY--LDDKTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTYGGWXAHGGGAFSGKDPTKVDRSGAYIVRQAAKSIVASGLARRC 509
            TPE MPL   LA +L  KL++VRK+G  P+L PDGKTQVTV Y  E+G   PV + T+LISTQH ET+           +I ADL + VIKPV       L D T F +NP+G+FVIGGP GD+GLTGRKIIIDTYGG+  HGGGAFSGKDPTKVDRS +Y  R  AK+IVA+GLA +C
Sbjct:  142 TPEFMPLPISLAHRLSLKLSQVRKSGELPYLGPDGKTQVTVIY--EDGK--PVGIDTILISTQHTETIGALTDNTEIQAKIKADLLEKVIKPVFVGATVGLSDSTKFLVNPTGKFVIGGPQGDSGLTGRKIIIDTYGGYSRHGGGAFSGKDPTKVDRSASYACRYVAKNIVAAGLAEKC 316          
BLAST of FC930974 vs. ExPASy Swiss-Prot
Match: METK_NEIMF (S-adenosylmethionine synthetase OS=Neisseria meningitidis serogroup C / serotype 2a (strain ATCC 700532 / FAM18) GN=metK PE=3 SV=1)

HSP 1 Score: 191.43 bits (485), Expect = 2.004e-48
Identity = 93/169 (55.03%), Postives = 124/169 (73.37%), Query Frame = 3
Query:    3 TPELMPLSHVLATKLGAKLTEVRKNGTCPWLRPDGKTQVTVEYYNENGAMVPVRVHTVLISTQHDETVTNDEIAADLKQHVIKPVIPDKYLDDKTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTYGGWXAHGGGAFSGKDPTKVDRSGAYIVRQAAKSIVASGLARRC 509
            TP LMP +   + +L  + +E+RK+G  PWLRPD K Q+TV Y +E+G +   R+ TV++STQHD  +  +E+   + + +IKPV+P + L D+T + +NP+GRFVIGGP GD GLTGRKII+DTYGG   HGGGAFSGKDP+KVDRS AY  R  AK+IVA+GLA +C
Sbjct:  133 TPTLMPFAIYYSHRLMQRQSELRKDGLLPWLRPDAKAQLTVVYDSESGKVK--RIDTVVLSTQHDPEIGYEELKNAVIEQIIKPVLPSELLTDETKYLINPTGRFVIGGPQGDCGLTGRKIIVDTYGGAAPHGGGAFSGKDPSKVDRSAAYACRYVAKNIVAAGLATQC 299          
BLAST of FC930974 vs. ExPASy Swiss-Prot
Match: METK_MYXXD (S-adenosylmethionine synthetase OS=Myxococcus xanthus (strain DK 1622) GN=metK PE=3 SV=1)

HSP 1 Score: 191.43 bits (485), Expect = 2.004e-48
Identity = 94/169 (55.62%), Postives = 123/169 (72.78%), Query Frame = 3
Query:    3 TPELMPLSHVLATKLGAKLTEVRKNGTCPWLRPDGKTQVTVEYYNENGAMVPVRVHTVLISTQHDETVTNDEIAADLKQHVIKPVIPDKYLDDKTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTYGGWXAHGGGAFSGKDPTKVDRSGAYIVRQAAKSIVASGLARRC 509
            TPELMP     A  +  +L +VR+    PW+RPDGK+QVTVEY +      P R+  V++STQH + V+N +I   +++ VI   +P K +D+KT F +NP+GRFV+GGP GD+GLTGRKII+DTYGG   HGGGAFSGKDP+KVDRS AY+ R  AK++VA+GLARRC
Sbjct:  130 TPELMPAPIHYAHAITRRLADVRRKQH-PWIRPDGKSQVTVEYRDGR----PARIDAVVVSTQHSDEVSNKKIQEAIREDVIAKALPKKLIDNKTKFFINPTGRFVVGGPMGDSGLTGRKIIVDTYGGMGRHGGGAFSGKDPSKVDRSAAYMGRHIAKTVVAAGLARRC 293          
BLAST of FC930974 vs. ExPASy Swiss-Prot
Match: METK_MYCMM (S-adenosylmethionine synthetase OS=Mycobacterium marinum (strain ATCC BAA-535 / M) GN=metK PE=3 SV=1)

HSP 1 Score: 191.43 bits (485), Expect = 2.004e-48
Identity = 102/173 (58.96%), Postives = 126/173 (72.83%), Query Frame = 3
Query:    3 TPELMPLSHVLATKLGAKLTEVRKNGTCPWLRPDGKTQVTVEYYNENGAMVPVRVHTVLISTQH-DETVTNDEIAADLKQHVIKPVIPD---KYLDDKTIFHL-NPSGRFVIGGPHGDAGLTGRKIIIDTYGGWXAHGGGAFSGKDPTKVDRSGAYIVRQAAKSIVASGLARR 506
            TPELMPL   LA +L  +LTEVRKNG  P+LRPDGKTQVT+ Y +     VPVR+ TV+ISTQH D+      +  D+++ V+K V+ D     LD   +  L NP+G+FV+GGP GDAGLTGRKII+DTYGGW  HGGGAFSGKDP+KVDRS AY +R  AK++VA+GLA R
Sbjct:  146 TPELMPLPIALAHRLSRRLTEVRKNGVLPYLRPDGKTQVTIAYEDR----VPVRLDTVVISTQHADDIDLVKTLDPDIREQVLKTVLDDLAHDTLDASAVRVLVNPTGKFVLGGPMGDAGLTGRKIIVDTYGGWARHGGGAFSGKDPSKVDRSAAYAMRWVAKNVVAAGLAER 314          
BLAST of FC930974 vs. ExPASy Swiss-Prot
Match: METK_SULDN (S-adenosylmethionine synthetase OS=Sulfurimonas denitrificans (strain ATCC 33889 / DSM 1251) GN=metK PE=3 SV=1)

HSP 1 Score: 191.045 bits (484), Expect = 2.618e-48
Identity = 95/168 (56.55%), Postives = 121/168 (72.02%), Query Frame = 3
Query:    3 TPELMPLSHVLATKLGAKLTEVRKNGTCPWLRPDGKTQVTVEYYNENGAMVPVRVHTVLISTQHDETVTNDEIAADLKQHVIKPVIPDKYLDDKTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTYGGWXAHGGGAFSGKDPTKVDRSGAYIVRQAAKSIVASGLARR 506
            T  LMPL   LA  L  +L EVRK G  P+LRPDGK Q++V+Y  +     PV V  V++STQH   V+ ++I  D+ + VI+ VIP + + +KT+FH+NP+G+FVIGGP GDAGLTGRKII+DTYGG   HGGGAFSGKDPTKVDRS AY  R  AK++VA+G+  R
Sbjct:  137 TDVLMPLPIYLAHLLTRRLAEVRKEGIIPYLRPDGKAQISVKYIGDK----PVSVEAVVVSTQHAPEVSQEKIREDVIRDVIRAVIPAELMSEKTLFHINPTGKFVIGGPQGDAGLTGRKIIVDTYGGSCPHGGGAFSGKDPTKVDRSAAYACRHVAKNLVAAGVCDR 300          
BLAST of FC930974 vs. ExPASy Swiss-Prot
Match: METK_NEIM0 (S-adenosylmethionine synthetase OS=Neisseria meningitidis serogroup C (strain 053442) GN=metK PE=3 SV=1)

HSP 1 Score: 191.045 bits (484), Expect = 2.618e-48
Identity = 93/169 (55.03%), Postives = 123/169 (72.78%), Query Frame = 3
Query:    3 TPELMPLSHVLATKLGAKLTEVRKNGTCPWLRPDGKTQVTVEYYNENGAMVPVRVHTVLISTQHDETVTNDEIAADLKQHVIKPVIPDKYLDDKTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTYGGWXAHGGGAFSGKDPTKVDRSGAYIVRQAAKSIVASGLARRC 509
            TP LMP +   + +L  + +E+RK+G  PWLRPD K Q+TV Y +E G +   R+ TV++STQHD  +  +E+   + + +IKPV+P + L D+T + +NP+GRFVIGGP GD GLTGRKII+DTYGG   HGGGAFSGKDP+KVDRS AY  R  AK+IVA+GLA +C
Sbjct:  133 TPTLMPFAIYYSHRLMQRQSELRKDGRLPWLRPDAKAQLTVVYDSETGKVK--RIDTVVLSTQHDPEIGYEELKNAVIEQIIKPVLPSELLTDETKYLINPTGRFVIGGPQGDCGLTGRKIIVDTYGGAAPHGGGAFSGKDPSKVDRSAAYACRYVAKNIVAAGLATQC 299          
BLAST of FC930974 vs. ExPASy Swiss-Prot
Match: METK_MYCA1 (S-adenosylmethionine synthetase OS=Mycobacterium avium (strain 104) GN=metK PE=3 SV=1)

HSP 1 Score: 191.045 bits (484), Expect = 2.618e-48
Identity = 99/173 (57.23%), Postives = 125/173 (72.25%), Query Frame = 3
Query:    3 TPELMPLSHVLATKLGAKLTEVRKNGTCPWLRPDGKTQVTVEYYNENGAMVPVRVHTVLISTQHDETVT-NDEIAADLKQHVIKPVIPDKYLD----DKTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTYGGWXAHGGGAFSGKDPTKVDRSGAYIVRQAAKSIVASGLARR 506
            TPE MPL   LA +L  +LTEVRKNG  P+LRPDGKTQVT+E+ ++    VPVR+ TV+ISTQH   +   + +  D+++ V+  V+ D   D      T   +NP+G+FV+GGP GDAGLTGRKII+DTYGGW  HGGGAFSGKDP+KVDRS AY +R  AK+IVA+GLA R
Sbjct:  146 TPERMPLPIALAHRLSRRLTEVRKNGVLPYLRPDGKTQVTIEFEDD----VPVRLDTVVISTQHAADIDLENTLTPDIREKVLNTVLNDLAHDTLDTSSTRLLVNPTGKFVVGGPMGDAGLTGRKIIVDTYGGWARHGGGAFSGKDPSKVDRSAAYAMRWVAKNIVAAGLAER 314          
BLAST of FC930974 vs. ExPASy Swiss-Prot
Match: METK_LACBA (S-adenosylmethionine synthetase OS=Lactobacillus brevis (strain ATCC 367 / JCM 1170) GN=metK PE=3 SV=1)

HSP 1 Score: 191.045 bits (484), Expect = 2.618e-48
Identity = 98/169 (57.99%), Postives = 121/169 (71.60%), Query Frame = 3
Query:    3 TPELMPLSHVLATKLGAKLTEVRKNGTCPWLRPDGKTQVTVEYYNENGAMVPVRVHTVLISTQHDETVTNDEIAADLKQHVIKPVIPDKYLDDKTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTYGGWXAHGGGAFSGKDPTKVDRSGAYIVRQAAKSIVASGLARRC 509
            TPELMPL   L+  L  ++  +RK     +LRPD K +VTVEY + +    P+RV TV++STQHD  VT D I  D+ + VIKP IP   LDD+T + +NP+GRFVIGGP GDAGLTGRKII+DTYGG   HGGGAFSGKD TKVDRS +Y  R  AK+IVA+ LA++C
Sbjct:  141 TPELMPLPIELSHALMRRIAMLRKQAVLDYLRPDAKAEVTVEYDDNDQ---PLRVDTVVLSTQHDPDVTLDRIRQDVIEQVIKPTIPADLLDDQTKYFINPTGRFVIGGPQGDAGLTGRKIIVDTYGGAARHGGGAFSGKDATKVDRSASYAARYIAKNIVAAELAQKC 306          
BLAST of FC930974 vs. ExPASy Swiss-Prot
Match: METK_MYCLE (S-adenosylmethionine synthetase OS=Mycobacterium leprae GN=metK PE=3 SV=1)

HSP 1 Score: 190.66 bits (483), Expect = 3.419e-48
Identity = 102/173 (58.96%), Postives = 124/173 (71.68%), Query Frame = 3
Query:    3 TPELMPLSHVLATKLGAKLTEVRKNGTCPWLRPDGKTQVTVEYYNENGAMVPVRVHTVLISTQHDETVTNDE-IAADLKQHVIKPVIPDKYLDDKTIFHL----NPSGRFVIGGPHGDAGLTGRKIIIDTYGGWXAHGGGAFSGKDPTKVDRSGAYIVRQAAKSIVASGLARR 506
            TPELMPL   LA +L  +LTEVRKNG  P+LR DGKTQVT+ Y +     VPVR+ TV+ISTQH   V  D  +A D+++ V+  VI D   D   +  +    NP+G+FV+GGP GDAGLTGRKII+DTYGGW  HGGGAFSGKDP+KVDRS AY +R  AK+IVA+GLA R
Sbjct:  146 TPELMPLPIALAHRLARRLTEVRKNGVLPYLRSDGKTQVTIAYEDN----VPVRLDTVVISTQHAAGVDLDATLAPDIREKVLNTVIDDLSHDTLDVSSVRVLVNPTGKFVLGGPMGDAGLTGRKIIVDTYGGWARHGGGAFSGKDPSKVDRSAAYAMRWVAKNIVAAGLAER 314          
The following BLAST results are available for this feature:
BLAST of FC930974 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
METK_ALTMD1.535e-4854.44S-adenosylmethionine synthetase OS=Alteromonas mac... [more]
METK_SYNP22.004e-4859.22S-adenosylmethionine synthetase OS=Synechococcus s... [more]
METK_NEIMF2.004e-4855.03S-adenosylmethionine synthetase OS=Neisseria menin... [more]
METK_MYXXD2.004e-4855.62S-adenosylmethionine synthetase OS=Myxococcus xant... [more]
METK_MYCMM2.004e-4858.96S-adenosylmethionine synthetase OS=Mycobacterium m... [more]
METK_SULDN2.618e-4856.55S-adenosylmethionine synthetase OS=Sulfurimonas de... [more]
METK_NEIM02.618e-4855.03S-adenosylmethionine synthetase OS=Neisseria menin... [more]
METK_MYCA12.618e-4857.23S-adenosylmethionine synthetase OS=Mycobacterium a... [more]
METK_LACBA2.618e-4857.99S-adenosylmethionine synthetase OS=Lactobacillus b... [more]
METK_MYCLE3.419e-4858.96S-adenosylmethionine synthetase OS=Mycobacterium l... [more]

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Properties
Property NameValue
Genbank descriptionC34100A09EF PostHarvP1 Citrus clementina cDNA clone C34100A09, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC930974 ID=FC930974; Name=FC930974; organism=Citrus clementina; type=EST; length=513bp
GGACTCCTGAGTTGATGCCTTTGAGTCATGTGCTTGCAACAAAGCTTGGT
GCTAAGCTTACAGAAGTGAGGAAGAATGGGACCTGTCCGTGGCTGAGGCC
AGATGGCAAAACACAAGTCACTGTTGAGTATTACAATGAGAATGGCGCCA
TGGTTCCTGTTCGTGTCCATACTGTGCTCATCTCAACTCAGCACGATGAG
ACTGTAACTAATGATGAGATTGCTGCAGATCTCAAGCAACATGTGATCAA
GCCTGTGATTCCTGACAAGTACTTGGATGACAAAACTATTTTCCATCTTA
ACCCATCTGGCCGTTTTGTGATTGGTGGCCCTCACGGTGATGCTGGGCTC
ACCGGCCGGAAGATTATTATTGATACTTATGGTGGCTGGNGGGCACACGG
TGGTGGGGCTTTCTCAGGGAAAGATCCTACCAAGGTTGATAGAAGCGGTG
CTTACATTGTAAGGCAAGCTGCTAAGAGTATTGTGGCAAGCGGGCTTGCC
AGGAGATGCATTG
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