FC930974

Overview
NameFC930974
Unique NameFC930974
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length513
Libraries
Library NameType
PostHarvP1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC930974 vs. ExPASy Swiss-Prot
Match: METK_MYCLB (S-adenosylmethionine synthetase OS=Mycobacterium leprae (strain Br4923) GN=metK PE=3 SV=1)

HSP 1 Score: 190.66 bits (483), Expect = 3.419e-48
Identity = 102/173 (58.96%), Postives = 124/173 (71.68%), Query Frame = 3
Query:    3 TPELMPLSHVLATKLGAKLTEVRKNGTCPWLRPDGKTQVTVEYYNENGAMVPVRVHTVLISTQHDETVTNDE-IAADLKQHVIKPVIPDKYLDDKTIFHL----NPSGRFVIGGPHGDAGLTGRKIIIDTYGGWXAHGGGAFSGKDPTKVDRSGAYIVRQAAKSIVASGLARR 506
            TPELMPL   LA +L  +LTEVRKNG  P+LR DGKTQVT+ Y +     VPVR+ TV+ISTQH   V  D  +A D+++ V+  VI D   D   +  +    NP+G+FV+GGP GDAGLTGRKII+DTYGGW  HGGGAFSGKDP+KVDRS AY +R  AK+IVA+GLA R
Sbjct:  146 TPELMPLPIALAHRLARRLTEVRKNGVLPYLRSDGKTQVTIAYEDN----VPVRLDTVVISTQHAAGVDLDATLAPDIREKVLNTVIDDLSHDTLDVSSVRVLVNPTGKFVLGGPMGDAGLTGRKIIVDTYGGWARHGGGAFSGKDPSKVDRSAAYAMRWVAKNIVAAGLAER 314          
BLAST of FC930974 vs. ExPASy Swiss-Prot
Match: METK_STRFR (S-adenosylmethionine synthetase OS=Streptomyces fradiae GN=metK PE=3 SV=1)

HSP 1 Score: 190.274 bits (482), Expect = 4.465e-48
Identity = 102/176 (57.95%), Postives = 127/176 (72.16%), Query Frame = 3
Query:    3 TPELMPLSHVLATKLGAKLTEVRKNGTCPWLRPDGKTQVTVEYYNENGAMVPVRVHTVLISTQHDETVTNDEIAA-DLKQHVIKPVIPDKYLD----DKTIFHL--NPSGRFVIGGPHGDAGLTGRKIIIDTYGGWXAHGGGAFSGKDPTKVDRSGAYIVRQAAKSIVASGLARRC 509
            TPELMPL   LA +L  +L+EVRKNGT P+LRPDGKTQVT+EY  +      VR+ TV++S+QH   +  D + A D+++HV++PV+     D    D   + L  NP+GRF IGGP GDAGLTGRKIIIDTYGG   HGGGAFSGKDP+KVDRS AY +R  AK++VA+GLA RC
Sbjct:  146 TPELMPLPINLAHRLSRRLSEVRKNGTIPYLRPDGKTQVTIEYDGDKA----VRLDTVVVSSQHASGIDLDSLLAPDIRRHVVEPVLAGLAEDGIKLDTAGYRLLVNPTGRFEIGGPMGDAGLTGRKIIIDTYGGMARHGGGAFSGKDPSKVDRSAAYAMRWVAKNVVAAGLASRC 317          
BLAST of FC930974 vs. ExPASy Swiss-Prot
Match: METK_MYCBT (S-adenosylmethionine synthetase OS=Mycobacterium bovis (strain BCG / Tokyo 172 / ATCC 35737 / TMC 1019) GN=metK PE=3 SV=1)

HSP 1 Score: 190.274 bits (482), Expect = 4.465e-48
Identity = 100/173 (57.80%), Postives = 128/173 (73.99%), Query Frame = 3
Query:    3 TPELMPLSHVLATKLGAKLTEVRKNGTCPWLRPDGKTQVTVEYYNENGAMVPVRVHTVLISTQHDETVTNDE-IAADLKQHVIKPVIPD---KYLDDKTIFHL-NPSGRFVIGGPHGDAGLTGRKIIIDTYGGWXAHGGGAFSGKDPTKVDRSGAYIVRQAAKSIVASGLARR 506
            TPELMPL   LA +L  +LTEVRKNG  P+LRPDGKTQVT+ Y +     VPV++ TV+ISTQH   +  ++ +  D+++ V+  V+ D   + LD  T+  L NP+G+FV+GGP GDAGLTGRKII+DTYGGW  HGGGAFSGKDP+KVDRS AY +R  AK++VA+GLA R
Sbjct:  146 TPELMPLPIALAHRLSRRLTEVRKNGVLPYLRPDGKTQVTIAYEDN----VPVQLDTVVISTQHAADIDLEKTLDPDIREKVLNTVLDDLAHETLDASTVRVLVNPTGKFVLGGPMGDAGLTGRKIIVDTYGGWARHGGGAFSGKDPSKVDRSAAYAMRWVAKNVVAAGLAER 314          
BLAST of FC930974 vs. ExPASy Swiss-Prot
Match: METK_MYCBP (S-adenosylmethionine synthetase OS=Mycobacterium bovis (strain BCG / Pasteur 1173P2) GN=metK PE=3 SV=1)

HSP 1 Score: 190.274 bits (482), Expect = 4.465e-48
Identity = 100/173 (57.80%), Postives = 128/173 (73.99%), Query Frame = 3
Query:    3 TPELMPLSHVLATKLGAKLTEVRKNGTCPWLRPDGKTQVTVEYYNENGAMVPVRVHTVLISTQHDETVTNDE-IAADLKQHVIKPVIPD---KYLDDKTIFHL-NPSGRFVIGGPHGDAGLTGRKIIIDTYGGWXAHGGGAFSGKDPTKVDRSGAYIVRQAAKSIVASGLARR 506
            TPELMPL   LA +L  +LTEVRKNG  P+LRPDGKTQVT+ Y +     VPV++ TV+ISTQH   +  ++ +  D+++ V+  V+ D   + LD  T+  L NP+G+FV+GGP GDAGLTGRKII+DTYGGW  HGGGAFSGKDP+KVDRS AY +R  AK++VA+GLA R
Sbjct:  146 TPELMPLPIALAHRLSRRLTEVRKNGVLPYLRPDGKTQVTIAYEDN----VPVQLDTVVISTQHAADIDLEKTLDPDIREKVLNTVLDDLAHETLDASTVRVLVNPTGKFVLGGPMGDAGLTGRKIIVDTYGGWARHGGGAFSGKDPSKVDRSAAYAMRWVAKNVVAAGLAER 314          
BLAST of FC930974 vs. ExPASy Swiss-Prot
Match: METK_LACLA (S-adenosylmethionine synthetase OS=Lactococcus lactis subsp. lactis GN=metK PE=3 SV=1)

HSP 1 Score: 190.274 bits (482), Expect = 4.465e-48
Identity = 99/168 (58.93%), Postives = 125/168 (74.40%), Query Frame = 3
Query:    3 TPELMPLSHVLATKLGAKLTEVRKNGTCPWLRPDGKTQVTVEYYNENGAMVPVRVHTVLISTQHDETVTNDEIAADLKQHVIKPVIPDKYLDDKTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTYGGWXAHGGGAFSGKDPTKVDRSGAYIVRQAAKSIVASGLARR 506
            T E MPL+  L+ KL  KL ++RK+G   +LRPD K+QVTVEY ++NG     R+ TV+ISTQH  +  N+EI  D+   VIK VIP + LDD+T + +NP+GRFVIGGP GD+GLTGRKII+DTYGG+  HGGGAFSGKD TKVDRS +Y  R  AK+IVA+GLA +
Sbjct:  144 TAEYMPLAISLSHKLVKKLADLRKSGEISYLRPDAKSQVTVEY-DDNGKAK--RIDTVVISTQHAASARNEEIHDDVINKVIKAVIPAELLDDETKYFINPTGRFVIGGPQGDSGLTGRKIIVDTYGGYAPHGGGAFSGKDATKVDRSASYAARYVAKNIVAAGLAEK 308          
BLAST of FC930974 vs. ExPASy Swiss-Prot
Match: METK_PROMH (S-adenosylmethionine synthetase OS=Proteus mirabilis (strain HI4320) GN=metK PE=3 SV=1)

HSP 1 Score: 189.889 bits (481), Expect = 5.832e-48
Identity = 91/169 (53.85%), Postives = 121/169 (71.60%), Query Frame = 3
Query:    3 TPELMPLSHVLATKLGAKLTEVRKNGTCPWLRPDGKTQVTVEYYNENGAMVPVRVHTVLISTQHDETVTNDEIAADLKQHVIKPVIPDKYLDDKTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTYGGWXAHGGGAFSGKDPTKVDRSGAYIVRQAAKSIVASGLARRC 509
            T  LMP     A +L  +  +VRKNGT PWLRPD K+Q+T +Y N N     V +  V++STQH E ++  ++   + + +IKP++P ++L+++T + +NP+GRFVIGGP GD GLTGRKII+DTYGG   HGGGAFSGKDP+KVDRS AY  R  AK+IVA+GLA RC
Sbjct:  131 TDVLMPAPITYAHRLVQRQAQVRKNGTLPWLRPDAKSQITFQYDNNN----IVGIDAVVLSTQHAEDISQKDLHEAVMEEIIKPILPTEWLNEQTKYFINPTGRFVIGGPMGDCGLTGRKIIVDTYGGMARHGGGAFSGKDPSKVDRSAAYAARYVAKNIVAAGLADRC 295          
BLAST of FC930974 vs. ExPASy Swiss-Prot
Match: METK_MANSM (S-adenosylmethionine synthetase OS=Mannheimia succiniciproducens (strain MBEL55E) GN=metK PE=3 SV=1)

HSP 1 Score: 189.889 bits (481), Expect = 5.832e-48
Identity = 95/169 (56.21%), Postives = 120/169 (71.01%), Query Frame = 3
Query:    3 TPELMPLSHVLATKLGAKLTEVRKNGTCPWLRPDGKTQVTVEYYNENGAMVPVRVHTVLISTQHDETVTNDEIAADLKQHVIKPVIPDKYLDDKTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTYGGWXAHGGGAFSGKDPTKVDRSGAYIVRQAAKSIVASGLARRC 509
            T  LMP +   A +L  +   VRKNGT PWLRPD K+QVT++Y N       V V  V++STQH ++VT +++   + + +IKPV+P K+L   T + +NP+GRFVIGGP GD GLTGRKII+DTYGG   HGGGAFSGKDP+KVDRS AY  R  AK+IVA+GLA RC
Sbjct:  131 TEVLMPAAITYAHRLMERQAWVRKNGTLPWLRPDAKSQVTLKYENNK----IVGVDAVVLSTQHSDSVTQEDLHEAVMEEIIKPVLPAKWLSKDTKYFINPTGRFVIGGPMGDCGLTGRKIIVDTYGGAARHGGGAFSGKDPSKVDRSAAYAARYVAKNIVAAGLADRC 295          
BLAST of FC930974 vs. ExPASy Swiss-Prot
Match: METK_LARHH (S-adenosylmethionine synthetase OS=Laribacter hongkongensis (strain HLHK9) GN=metK PE=3 SV=1)

HSP 1 Score: 189.889 bits (481), Expect = 5.832e-48
Identity = 93/169 (55.03%), Postives = 121/169 (71.60%), Query Frame = 3
Query:    3 TPELMPLSHVLATKLGAKLTEVRKNGTCPWLRPDGKTQVTVEYYNENGAMVPVRVHTVLISTQHDETVTNDEIAADLKQHVIKPVIPDKYLDDKTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTYGGWXAHGGGAFSGKDPTKVDRSGAYIVRQAAKSIVASGLARRC 509
            TP LMP     A +L  +  E+RK+G  PWLRPD K+Q+T  Y +E G  +P R+ TV++STQH   +++D +   + + ++KPV+P   L  +T F +NP+GRFVIGGP GD GLTGRKII+DTYGG   HGGGAFSGKDP+KVDRS AY  R  AK+IVA+GLAR+C
Sbjct:  133 TPTLMPFPIYYAHRLVQRQAELRKDGRLPWLRPDAKSQITCAYDSETG--LPKRIDTVVLSTQHSPDISHDMLTEAVIEDIVKPVLPAHMLTAETKFLINPTGRFVIGGPMGDCGLTGRKIIVDTYGGAAPHGGGAFSGKDPSKVDRSAAYAGRYVAKNIVAAGLARQC 299          
BLAST of FC930974 vs. ExPASy Swiss-Prot
Match: METK_THEEB (S-adenosylmethionine synthetase OS=Thermosynechococcus elongatus (strain BP-1) GN=metK PE=3 SV=1)

HSP 1 Score: 189.504 bits (480), Expect = 7.617e-48
Identity = 102/179 (56.98%), Postives = 126/179 (70.39%), Query Frame = 3
Query:    3 TPELMPLSHVLATKLGAKLTEVRKNGTCPWLRPDGKTQVTVEYYNENGAMVPVRVHTVLISTQH--------DETVTNDEIAADLKQHVIKPVIPDKYL--DDKTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTYGGWXAHGGGAFSGKDPTKVDRSGAYIVRQAAKSIVASGLARRC 509
            TPE MPL   LA ++  +L  VRK G  P+LRPDGKTQVTV Y  E+G   PV + T+LISTQH        +E+    +I ADL + V+KPV  D  L  D  T F +NP+G+FVIGGP GD+GLTGRK+++DTYGG+  HGGGAFSGKDPTKVDRS AY+ R  AK+IVA+GLA +C
Sbjct:  140 TPEYMPLPISLAHRMARRLAAVRKTGQLPYLRPDGKTQVTVIY--EDGK--PVGIDTILISTQHTATIDDISEESAVQAKIKADLWEAVVKPVFADLTLQPDGNTRFLVNPTGKFVIGGPQGDSGLTGRKLVVDTYGGYARHGGGAFSGKDPTKVDRSAAYMARYIAKNIVAAGLADKC 314          
BLAST of FC930974 vs. ExPASy Swiss-Prot
Match: METK_MYCUA (S-adenosylmethionine synthetase OS=Mycobacterium ulcerans (strain Agy99) GN=metK PE=3 SV=1)

HSP 1 Score: 189.504 bits (480), Expect = 7.617e-48
Identity = 101/171 (59.06%), Postives = 125/171 (73.10%), Query Frame = 3
Query:    3 TPELMPLSHVLATKLGAKLTEVRKNGTCPWLRPDGKTQVTVEYYNENGAMVPVRVHTVLISTQH-DETVTNDEIAADLKQHVIKPVIPD---KYLDDKTIFHL-NPSGRFVIGGPHGDAGLTGRKIIIDTYGGWXAHGGGAFSGKDPTKVDRSGAYIVRQAAKSIVASGLA 500
            TPELMPL   LA +L  +LTEVRKNG  P+LRPDGKTQVT+ Y +     VPVR+ TV+ISTQH D+      +  D+++ V+K V+ D     LD   +  L NP+G+FV+GGP GDAGLTGRKII+DTYGGW  HGGGAFSGKDP+KVDRS AY +R  AK++VA+GLA
Sbjct:  146 TPELMPLPIALAHRLSRRLTEVRKNGVLPYLRPDGKTQVTIAYEDR----VPVRLDTVVISTQHADDIDLVKTLDPDIREQVLKTVLDDLAHDTLDASAVRVLVNPTGKFVLGGPMGDAGLTGRKIIVDTYGGWARHGGGAFSGKDPSKVDRSAAYAMRWVAKNVVAAGLA 312          
The following BLAST results are available for this feature:
BLAST of FC930974 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
METK_MYCLB3.419e-4858.96S-adenosylmethionine synthetase OS=Mycobacterium l... [more]
METK_STRFR4.465e-4857.95S-adenosylmethionine synthetase OS=Streptomyces fr... [more]
METK_MYCBT4.465e-4857.80S-adenosylmethionine synthetase OS=Mycobacterium b... [more]
METK_MYCBP4.465e-4857.80S-adenosylmethionine synthetase OS=Mycobacterium b... [more]
METK_LACLA4.465e-4858.93S-adenosylmethionine synthetase OS=Lactococcus lac... [more]
METK_PROMH5.832e-4853.85S-adenosylmethionine synthetase OS=Proteus mirabil... [more]
METK_MANSM5.832e-4856.21S-adenosylmethionine synthetase OS=Mannheimia succ... [more]
METK_LARHH5.832e-4855.03S-adenosylmethionine synthetase OS=Laribacter hong... [more]
METK_THEEB7.617e-4856.98S-adenosylmethionine synthetase OS=Thermosynechoco... [more]
METK_MYCUA7.617e-4859.06S-adenosylmethionine synthetase OS=Mycobacterium u... [more]

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Properties
Property NameValue
Genbank descriptionC34100A09EF PostHarvP1 Citrus clementina cDNA clone C34100A09, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC930974 ID=FC930974; Name=FC930974; organism=Citrus clementina; type=EST; length=513bp
GGACTCCTGAGTTGATGCCTTTGAGTCATGTGCTTGCAACAAAGCTTGGT
GCTAAGCTTACAGAAGTGAGGAAGAATGGGACCTGTCCGTGGCTGAGGCC
AGATGGCAAAACACAAGTCACTGTTGAGTATTACAATGAGAATGGCGCCA
TGGTTCCTGTTCGTGTCCATACTGTGCTCATCTCAACTCAGCACGATGAG
ACTGTAACTAATGATGAGATTGCTGCAGATCTCAAGCAACATGTGATCAA
GCCTGTGATTCCTGACAAGTACTTGGATGACAAAACTATTTTCCATCTTA
ACCCATCTGGCCGTTTTGTGATTGGTGGCCCTCACGGTGATGCTGGGCTC
ACCGGCCGGAAGATTATTATTGATACTTATGGTGGCTGGNGGGCACACGG
TGGTGGGGCTTTCTCAGGGAAAGATCCTACCAAGGTTGATAGAAGCGGTG
CTTACATTGTAAGGCAAGCTGCTAAGAGTATTGTGGCAAGCGGGCTTGCC
AGGAGATGCATTG
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