FC930974

Overview
NameFC930974
Unique NameFC930974
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length513
Libraries
Library NameType
PostHarvP1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC930974 vs. ExPASy Swiss-Prot
Match: METK_MYCSS (S-adenosylmethionine synthetase OS=Mycobacterium sp. (strain MCS) GN=metK PE=3 SV=1)

HSP 1 Score: 189.504 bits (480), Expect = 7.617e-48
Identity = 100/173 (57.80%), Postives = 126/173 (72.83%), Query Frame = 3
Query:    3 TPELMPLSHVLATKLGAKLTEVRKNGTCPWLRPDGKTQVTVEYYNENGAMVPVRVHTVLISTQHDETVTND-EIAADLKQHVIKPVIPDKYLD--DKTIFHL--NPSGRFVIGGPHGDAGLTGRKIIIDTYGGWXAHGGGAFSGKDPTKVDRSGAYIVRQAAKSIVASGLARR 506
            TPELMPL   LA +L  +LTEVRKNG   +LRPDGKTQVTV+Y      + PVR+ TV++STQH E +  +  +  D+++ V+  V+ D   D  D + F L  NP+G+FV+GGP GDAGLTGRKII+DTYGGW  HGGGAFSGKDP+KVDRS AY +R  AK++VA+GLA R
Sbjct:  145 TPELMPLPIALAHRLARRLTEVRKNGVLDYLRPDGKTQVTVQY----DGVTPVRLDTVVLSTQHAEGIDLEGTLTPDIREKVVNTVLSDLNHDSMDTSDFRLLVNPTGKFVLGGPMGDAGLTGRKIIVDTYGGWARHGGGAFSGKDPSKVDRSAAYAMRWVAKNVVAAGLADR 313          
BLAST of FC930974 vs. ExPASy Swiss-Prot
Match: METK_MYCSK (S-adenosylmethionine synthetase OS=Mycobacterium sp. (strain KMS) GN=metK PE=3 SV=1)

HSP 1 Score: 189.504 bits (480), Expect = 7.617e-48
Identity = 100/173 (57.80%), Postives = 126/173 (72.83%), Query Frame = 3
Query:    3 TPELMPLSHVLATKLGAKLTEVRKNGTCPWLRPDGKTQVTVEYYNENGAMVPVRVHTVLISTQHDETVTND-EIAADLKQHVIKPVIPDKYLD--DKTIFHL--NPSGRFVIGGPHGDAGLTGRKIIIDTYGGWXAHGGGAFSGKDPTKVDRSGAYIVRQAAKSIVASGLARR 506
            TPELMPL   LA +L  +LTEVRKNG   +LRPDGKTQVTV+Y      + PVR+ TV++STQH E +  +  +  D+++ V+  V+ D   D  D + F L  NP+G+FV+GGP GDAGLTGRKII+DTYGGW  HGGGAFSGKDP+KVDRS AY +R  AK++VA+GLA R
Sbjct:  145 TPELMPLPIALAHRLARRLTEVRKNGVLDYLRPDGKTQVTVQY----DGVTPVRLDTVVLSTQHAEGIDLEGTLTPDIREKVVNTVLSDLNHDSMDTSDFRLLVNPTGKFVLGGPMGDAGLTGRKIIVDTYGGWARHGGGAFSGKDPSKVDRSAAYAMRWVAKNVVAAGLADR 313          
BLAST of FC930974 vs. ExPASy Swiss-Prot
Match: METK_MYCSJ (S-adenosylmethionine synthetase OS=Mycobacterium sp. (strain JLS) GN=metK PE=3 SV=1)

HSP 1 Score: 189.504 bits (480), Expect = 7.617e-48
Identity = 100/173 (57.80%), Postives = 126/173 (72.83%), Query Frame = 3
Query:    3 TPELMPLSHVLATKLGAKLTEVRKNGTCPWLRPDGKTQVTVEYYNENGAMVPVRVHTVLISTQHDETVTND-EIAADLKQHVIKPVIPDKYLD--DKTIFHL--NPSGRFVIGGPHGDAGLTGRKIIIDTYGGWXAHGGGAFSGKDPTKVDRSGAYIVRQAAKSIVASGLARR 506
            TPELMPL   LA +L  +LTEVRKNG   +LRPDGKTQVTV+Y      + PVR+ TV++STQH E +  +  +  D+++ V+  V+ D   D  D + F L  NP+G+FV+GGP GDAGLTGRKII+DTYGGW  HGGGAFSGKDP+KVDRS AY +R  AK++VA+GLA R
Sbjct:  145 TPELMPLPIALAHRLARRLTEVRKNGVLDYLRPDGKTQVTVQY----DGVTPVRLDTVVLSTQHAEGIDLEGTLTPDIREKVVNTVLSDLNHDSMDTSDFRLLVNPTGKFVLGGPMGDAGLTGRKIIVDTYGGWARHGGGAFSGKDPSKVDRSAAYAMRWVAKNVVAAGLADR 313          
BLAST of FC930974 vs. ExPASy Swiss-Prot
Match: METK_SYNY3 (S-adenosylmethionine synthetase OS=Synechocystis sp. (strain PCC 6803) GN=metK PE=3 SV=2)

HSP 1 Score: 189.119 bits (479), Expect = 9.948e-48
Identity = 101/179 (56.42%), Postives = 128/179 (71.51%), Query Frame = 3
Query:    3 TPELMPLSHVLATKLGAKLTEVRKNGTCPWLRPDGKTQVTVEYYNENGAMVPVRVHTVLISTQHDETV----TNDEIAADLKQHVIKPVIPDKYLD------DKTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTYGGWXAHGGGAFSGKDPTKVDRSGAYIVRQAAKSIVASGLARRC 509
            TPELMPL   LA ++  +L+EVRK+G   +LRPDGKTQV++ Y  E+G+  PV + T+LISTQHDE +     ND + A +K  +   V+   + D      DKT F +NP+G+FV+GGP GDAGLTGRKII+DTYGG+  HGGGAFSGKDPTKVDRS AY  R  AK+IVA+GLA +C
Sbjct:  148 TPELMPLPISLAHRIALRLSEVRKSGQLAYLRPDGKTQVSILY--EDGS--PVAIDTILISTQHDEHIGDITDNDAVQAKIKADLWDVVVGHCFSDIALKPTDKTRFIVNPTGKFVVGGPQGDAGLTGRKIIVDTYGGYSRHGGGAFSGKDPTKVDRSAAYAARYVAKNIVAAGLADKC 322          
BLAST of FC930974 vs. ExPASy Swiss-Prot
Match: METK_SYNPW (S-adenosylmethionine synthetase OS=Synechococcus sp. (strain WH7803) GN=metK PE=3 SV=1)

HSP 1 Score: 189.119 bits (479), Expect = 9.948e-48
Identity = 101/179 (56.42%), Postives = 123/179 (68.72%), Query Frame = 3
Query:    3 TPELMPLSHVLATKLGAKLTEVRKNGTCPWLRPDGKTQVTVEYYNENGAMVPVRVHTVLISTQH--------DETVTNDEIAADLKQHVIKPV---IPDKYLDDKTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTYGGWXAHGGGAFSGKDPTKVDRSGAYIVRQAAKSIVASGLARR 506
            TPELMPL   LA +L  +L EVR NGT  +L PDGKTQV+V Y N+     PV + T+LISTQH        DE    + I+ DL  HV++P    +P K   D T + +NP+G+FV+GGP GDAGLTGRKII+DTYGG+  HGGGAFSGKDPTKVDRS AY  R  AK +VA+GLA+R
Sbjct:  138 TPELMPLPISLAHRLSRRLAEVRHNGTLDYLLPDGKTQVSVVYENDK----PVAIDTILISTQHTAEVAGLSDEQQVRERISDDLWTHVVEPATADLPLKPSKDSTRYLVNPTGKFVVGGPQGDAGLTGRKIIVDTYGGYARHGGGAFSGKDPTKVDRSAAYAARYVAKCLVAAGLAQR 312          
BLAST of FC930974 vs. ExPASy Swiss-Prot
Match: METK_SERP5 (S-adenosylmethionine synthetase OS=Serratia proteamaculans (strain 568) GN=metK PE=3 SV=1)

HSP 1 Score: 189.119 bits (479), Expect = 9.948e-48
Identity = 94/169 (55.62%), Postives = 121/169 (71.60%), Query Frame = 3
Query:    3 TPELMPLSHVLATKLGAKLTEVRKNGTCPWLRPDGKTQVTVEYYNENGAMVPVRVHTVLISTQHDETVTNDEIAADLKQHVIKPVIPDKYLDDKTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTYGGWXAHGGGAFSGKDPTKVDRSGAYIVRQAAKSIVASGLARRC 509
            T  LMP     A +L  +  EVRKNGT PWLRPD K+QVT +Y  ++G +V +    V++STQH E ++  ++   + + +IKPV+P ++L   T +H+NP+GRFVIGGP GD GLTGRKII+DTYGG   HGGGAFSGKDP+KVDRS AY  R  AK+IVA+GLA RC
Sbjct:  131 TEVLMPAPVTYAHRLVQRQAEVRKNGTLPWLRPDAKSQVTFQY--DDGKIVGI--DAVVLSTQHSEDISLKDLQEAVMEEIIKPVLPTEWLSAGTKYHINPTGRFVIGGPMGDCGLTGRKIIVDTYGGMARHGGGAFSGKDPSKVDRSAAYAARYVAKNIVAAGLADRC 295          
BLAST of FC930974 vs. ExPASy Swiss-Prot
Match: METK_DICNV (S-adenosylmethionine synthetase OS=Dichelobacter nodosus (strain VCS1703A) GN=metK PE=3 SV=1)

HSP 1 Score: 189.119 bits (479), Expect = 9.948e-48
Identity = 89/169 (52.66%), Postives = 118/169 (69.82%), Query Frame = 3
Query:    3 TPELMPLSHVLATKLGAKLTEVRKNGTCPWLRPDGKTQVTVEYYNENGAMVPVRVHTVLISTQHDETVTNDEIAADLKQHVIKPVIPDKYLDDKTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTYGGWXAHGGGAFSGKDPTKVDRSGAYIVRQAAKSIVASGLARRC 509
            TP LMP     A +L  K  ++R +G  PWLRPD K+Q+T  Y +       V V  +++STQH E ++  E+   +++ +I P++P K++D KT FH+NP+G+FVIGGP GD GLTGRKII+DTYGG   HGGGAFSGKDP+KVDRS AY  R  AK++VA+GLA RC
Sbjct:  131 TPTLMPAPITYAHRLVEKQAQLRHSGALPWLRPDAKSQITFRYRDNT----IVGVDAIVLSTQHSEEISLKELTEAVREEIIAPIVPSKWIDKKTRFHINPTGKFVIGGPLGDCGLTGRKIIVDTYGGAARHGGGAFSGKDPSKVDRSAAYAARYVAKNVVAAGLATRC 295          
BLAST of FC930974 vs. ExPASy Swiss-Prot
Match: METK_AZOSB (S-adenosylmethionine synthetase OS=Azoarcus sp. (strain BH72) GN=metK PE=3 SV=1)

HSP 1 Score: 189.119 bits (479), Expect = 9.948e-48
Identity = 91/169 (53.85%), Postives = 123/169 (72.78%), Query Frame = 3
Query:    3 TPELMPLSHVLATKLGAKLTEVRKNGTCPWLRPDGKTQVTVEYYNENGAMVPVRVHTVLISTQHDETVTNDEIAADLKQHVIKPVIPDKYLDDKTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTYGGWXAHGGGAFSGKDPTKVDRSGAYIVRQAAKSIVASGLARRC 509
            TP LMPL    A ++  +  EVRK+G  PWLRPD K+Q+TV+Y +      PV + TV++STQH+  V++ +I+  + + +IKPV+P + +  +  + +NP+GRFVIGGPHGD GLTGRKII+DTYGG   HGGGAFSGKDP+KVDRS AY  R  AK++VA+GLA +C
Sbjct:  134 TPSLMPLPIYYAHRIMQRQAEVRKDGRLPWLRPDAKSQLTVKYVDGK----PVAIDTVVVSTQHNPEVSHAQISEAVIEEIIKPVLPKELMQGEVRYLINPTGRFVIGGPHGDCGLTGRKIIVDTYGGAAHHGGGAFSGKDPSKVDRSAAYAGRYVAKNVVAAGLADKC 298          
BLAST of FC930974 vs. ExPASy Swiss-Prot
Match: METK_YERE8 (S-adenosylmethionine synthetase OS=Yersinia enterocolitica serotype O:8 / biotype 1B (strain 8081) GN=metK PE=3 SV=1)

HSP 1 Score: 188.734 bits (478), Expect = 1.299e-47
Identity = 92/169 (54.44%), Postives = 122/169 (72.19%), Query Frame = 3
Query:    3 TPELMPLSHVLATKLGAKLTEVRKNGTCPWLRPDGKTQVTVEYYNENGAMVPVRVHTVLISTQHDETVTNDEIAADLKQHVIKPVIPDKYLDDKTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTYGGWXAHGGGAFSGKDPTKVDRSGAYIVRQAAKSIVASGLARRC 509
            T  LMP     A +L  +  EVRKNGT PWLRPD K+Q+T +Y  ++G +V +    V++STQH + ++  ++   + + +IKPV+P ++L  +T +H+NP+GRFVIGGP GD GLTGRKII+DTYGG   HGGGAFSGKDP+KVDRS AY  R  AK+IVA+GLA RC
Sbjct:  131 TSVLMPAPITYAHRLVERQAEVRKNGTLPWLRPDAKSQITFQY--DDGKIVGI--DAVVLSTQHSDDISLTDLQEAVMEEIIKPVLPAEWLSKETKYHINPTGRFVIGGPMGDCGLTGRKIIVDTYGGMARHGGGAFSGKDPSKVDRSAAYAARYVAKNIVAAGLADRC 295          
BLAST of FC930974 vs. ExPASy Swiss-Prot
Match: METK_SULNB (S-adenosylmethionine synthetase OS=Sulfurovum sp. (strain NBC37-1) GN=metK PE=3 SV=1)

HSP 1 Score: 188.348 bits (477), Expect = 1.697e-47
Identity = 97/165 (58.79%), Postives = 120/165 (72.73%), Query Frame = 3
Query:    3 TPELMPLSHVLATKLGAKLTEVRKNGTCPWLRPDGKTQVTVEYYNENGAMVPVRVHTVLISTQHDETVTNDEIAADLKQHVIKPVIPDKYLDDKTI-FHLNPSGRFVIGGPHGDAGLTGRKIIIDTYGGWXAHGGGAFSGKDPTKVDRSGAYIVRQAAKSIVASG 494
            T ELMPL   LA  +  KL  VRKNGT P+LRPDGK QV+V+Y +      PV V T+++STQH ETV+ +++   +K+ VI PV+    +D   I +H+NP+GRFVIGGP GDAGLTGRKII+DTYGG   HGGGAFSGKDPTKVDRS AY  R  AK++VA+G
Sbjct:  131 TKELMPLPISLAHHITRKLAAVRKNGTVPFLRPDGKAQVSVKYVDGK----PVAVDTIVVSTQHHETVSLEQVQKAVKEEVIDPVLATYDIDISDITYHINPTGRFVIGGPQGDAGLTGRKIIVDTYGGSCPHGGGAFSGKDPTKVDRSAAYAARYVAKNLVAAG 291          
The following BLAST results are available for this feature:
BLAST of FC930974 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
METK_MYCSS7.617e-4857.80S-adenosylmethionine synthetase OS=Mycobacterium s... [more]
METK_MYCSK7.617e-4857.80S-adenosylmethionine synthetase OS=Mycobacterium s... [more]
METK_MYCSJ7.617e-4857.80S-adenosylmethionine synthetase OS=Mycobacterium s... [more]
METK_SYNY39.948e-4856.42S-adenosylmethionine synthetase OS=Synechocystis s... [more]
METK_SYNPW9.948e-4856.42S-adenosylmethionine synthetase OS=Synechococcus s... [more]
METK_SERP59.948e-4855.62S-adenosylmethionine synthetase OS=Serratia protea... [more]
METK_DICNV9.948e-4852.66S-adenosylmethionine synthetase OS=Dichelobacter n... [more]
METK_AZOSB9.948e-4853.85S-adenosylmethionine synthetase OS=Azoarcus sp. (s... [more]
METK_YERE81.299e-4754.44S-adenosylmethionine synthetase OS=Yersinia entero... [more]
METK_SULNB1.697e-4758.79S-adenosylmethionine synthetase OS=Sulfurovum sp. ... [more]

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Properties
Property NameValue
Genbank descriptionC34100A09EF PostHarvP1 Citrus clementina cDNA clone C34100A09, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC930974 ID=FC930974; Name=FC930974; organism=Citrus clementina; type=EST; length=513bp
GGACTCCTGAGTTGATGCCTTTGAGTCATGTGCTTGCAACAAAGCTTGGT
GCTAAGCTTACAGAAGTGAGGAAGAATGGGACCTGTCCGTGGCTGAGGCC
AGATGGCAAAACACAAGTCACTGTTGAGTATTACAATGAGAATGGCGCCA
TGGTTCCTGTTCGTGTCCATACTGTGCTCATCTCAACTCAGCACGATGAG
ACTGTAACTAATGATGAGATTGCTGCAGATCTCAAGCAACATGTGATCAA
GCCTGTGATTCCTGACAAGTACTTGGATGACAAAACTATTTTCCATCTTA
ACCCATCTGGCCGTTTTGTGATTGGTGGCCCTCACGGTGATGCTGGGCTC
ACCGGCCGGAAGATTATTATTGATACTTATGGTGGCTGGNGGGCACACGG
TGGTGGGGCTTTCTCAGGGAAAGATCCTACCAAGGTTGATAGAAGCGGTG
CTTACATTGTAAGGCAAGCTGCTAAGAGTATTGTGGCAAGCGGGCTTGCC
AGGAGATGCATTG
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