FC930974

Overview
NameFC930974
Unique NameFC930974
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length513
Libraries
Library NameType
PostHarvP1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of FC930974 vs. ExPASy Swiss-Prot
Match: METK_SALPK (S-adenosylmethionine synthetase OS=Salmonella paratyphi A (strain AKU_12601) GN=metK PE=3 SV=1)

HSP 1 Score: 187.193 bits (474), Expect = 3.780e-47
Identity = 93/169 (55.03%), Postives = 119/169 (70.41%), Query Frame = 3 
Query:    3 TPELMPLSHVLATKLGAKLTEVRKNGTCPWLRPDGKTQVTVEYYNENGAMVPVRVHTVLISTQHDETVTNDEIAADLKQHVIKPVIPDKYLDDKTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTYGGWXAHGGGAFSGKDPTKVDRSGAYIVRQAAKSIVASGLARRC 509
            T  LMP     A +L  +  EVRKNGT PWLRPD K+QVT +Y  ++G +V +    V++STQH E +    +   + + +IKP++P ++L+  T F +NP+GRFVIGGP GD GLTGRKII+DTYGG   HGGGAFSGKDP+KVDRS AY  R  AK+IVA+GLA RC
Sbjct:  131 TDVLMPAPITYAHRLVQRQAEVRKNGTLPWLRPDAKSQVTFQY--DDGKIVGI--DAVVLSTQHAEDIDQKSLQEAVMEEIIKPILPSEWLNTSTKFFINPTGRFVIGGPMGDCGLTGRKIIVDTYGGMARHGGGAFSGKDPSKVDRSAAYAARYVAKNIVAAGLADRC 295
[Close]
BLAST of FC930974 vs. ExPASy Swiss-Prot
Match: METK_SALPA (S-adenosylmethionine synthetase OS=Salmonella paratyphi A GN=metK PE=3 SV=1)

HSP 1 Score: 187.193 bits (474), Expect = 3.780e-47
Identity = 93/169 (55.03%), Postives = 119/169 (70.41%), Query Frame = 3 
Query:    3 TPELMPLSHVLATKLGAKLTEVRKNGTCPWLRPDGKTQVTVEYYNENGAMVPVRVHTVLISTQHDETVTNDEIAADLKQHVIKPVIPDKYLDDKTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTYGGWXAHGGGAFSGKDPTKVDRSGAYIVRQAAKSIVASGLARRC 509
            T  LMP     A +L  +  EVRKNGT PWLRPD K+QVT +Y  ++G +V +    V++STQH E +    +   + + +IKP++P ++L+  T F +NP+GRFVIGGP GD GLTGRKII+DTYGG   HGGGAFSGKDP+KVDRS AY  R  AK+IVA+GLA RC
Sbjct:  131 TDVLMPAPITYAHRLVQRQAEVRKNGTLPWLRPDAKSQVTFQY--DDGKIVGI--DAVVLSTQHAEDIDQKSLQEAVMEEIIKPILPSEWLNTSTKFFINPTGRFVIGGPMGDCGLTGRKIIVDTYGGMARHGGGAFSGKDPSKVDRSAAYAARYVAKNIVAAGLADRC 295
[Close]
BLAST of FC930974 vs. ExPASy Swiss-Prot
Match: METK_SALNS (S-adenosylmethionine synthetase OS=Salmonella newport (strain SL254) GN=metK PE=3 SV=1)

HSP 1 Score: 187.193 bits (474), Expect = 3.780e-47
Identity = 93/169 (55.03%), Postives = 119/169 (70.41%), Query Frame = 3 
Query:    3 TPELMPLSHVLATKLGAKLTEVRKNGTCPWLRPDGKTQVTVEYYNENGAMVPVRVHTVLISTQHDETVTNDEIAADLKQHVIKPVIPDKYLDDKTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTYGGWXAHGGGAFSGKDPTKVDRSGAYIVRQAAKSIVASGLARRC 509
            T  LMP     A +L  +  EVRKNGT PWLRPD K+QVT +Y  ++G +V +    V++STQH E +    +   + + +IKP++P ++L+  T F +NP+GRFVIGGP GD GLTGRKII+DTYGG   HGGGAFSGKDP+KVDRS AY  R  AK+IVA+GLA RC
Sbjct:  131 TDVLMPAPITYAHRLVQRQAEVRKNGTLPWLRPDAKSQVTFQY--DDGKIVGI--DAVVLSTQHAEDIDQKSLQEAVMEEIIKPILPSEWLNTSTKFFINPTGRFVIGGPMGDCGLTGRKIIVDTYGGMARHGGGAFSGKDPSKVDRSAAYAARYVAKNIVAAGLADRC 295
[Close]
BLAST of FC930974 vs. ExPASy Swiss-Prot
Match: METK_SALHS (S-adenosylmethionine synthetase OS=Salmonella heidelberg (strain SL476) GN=metK PE=3 SV=1)

HSP 1 Score: 187.193 bits (474), Expect = 3.780e-47
Identity = 93/169 (55.03%), Postives = 119/169 (70.41%), Query Frame = 3 
Query:    3 TPELMPLSHVLATKLGAKLTEVRKNGTCPWLRPDGKTQVTVEYYNENGAMVPVRVHTVLISTQHDETVTNDEIAADLKQHVIKPVIPDKYLDDKTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTYGGWXAHGGGAFSGKDPTKVDRSGAYIVRQAAKSIVASGLARRC 509
            T  LMP     A +L  +  EVRKNGT PWLRPD K+QVT +Y  ++G +V +    V++STQH E +    +   + + +IKP++P ++L+  T F +NP+GRFVIGGP GD GLTGRKII+DTYGG   HGGGAFSGKDP+KVDRS AY  R  AK+IVA+GLA RC
Sbjct:  131 TDVLMPAPITYAHRLVQRQAEVRKNGTLPWLRPDAKSQVTFQY--DDGKIVGI--DAVVLSTQHAEDIDQKSLQEAVMEEIIKPILPSEWLNTSTKFFINPTGRFVIGGPMGDCGLTGRKIIVDTYGGMARHGGGAFSGKDPSKVDRSAAYAARYVAKNIVAAGLADRC 295
[Close]
BLAST of FC930974 vs. ExPASy Swiss-Prot
Match: METK_SALG2 (S-adenosylmethionine synthetase OS=Salmonella gallinarum (strain 287/91 / NCTC 13346) GN=metK PE=3 SV=1)

HSP 1 Score: 187.193 bits (474), Expect = 3.780e-47
Identity = 93/169 (55.03%), Postives = 119/169 (70.41%), Query Frame = 3 
Query:    3 TPELMPLSHVLATKLGAKLTEVRKNGTCPWLRPDGKTQVTVEYYNENGAMVPVRVHTVLISTQHDETVTNDEIAADLKQHVIKPVIPDKYLDDKTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTYGGWXAHGGGAFSGKDPTKVDRSGAYIVRQAAKSIVASGLARRC 509
            T  LMP     A +L  +  EVRKNGT PWLRPD K+QVT +Y  ++G +V +    V++STQH E +    +   + + +IKP++P ++L+  T F +NP+GRFVIGGP GD GLTGRKII+DTYGG   HGGGAFSGKDP+KVDRS AY  R  AK+IVA+GLA RC
Sbjct:  131 TDVLMPAPITYAHRLVQRQAEVRKNGTLPWLRPDAKSQVTFQY--DDGKIVGI--DAVVLSTQHAEDIDQKSLQEAVMEEIIKPILPSEWLNTSTKFFINPTGRFVIGGPMGDCGLTGRKIIVDTYGGMARHGGGAFSGKDPSKVDRSAAYAARYVAKNIVAAGLADRC 295
[Close]
BLAST of FC930974 vs. ExPASy Swiss-Prot
Match: METK_SALEP (S-adenosylmethionine synthetase OS=Salmonella enteritidis PT4 (strain P125109) GN=metK PE=3 SV=1)

HSP 1 Score: 187.193 bits (474), Expect = 3.780e-47
Identity = 93/169 (55.03%), Postives = 119/169 (70.41%), Query Frame = 3 
Query:    3 TPELMPLSHVLATKLGAKLTEVRKNGTCPWLRPDGKTQVTVEYYNENGAMVPVRVHTVLISTQHDETVTNDEIAADLKQHVIKPVIPDKYLDDKTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTYGGWXAHGGGAFSGKDPTKVDRSGAYIVRQAAKSIVASGLARRC 509
            T  LMP     A +L  +  EVRKNGT PWLRPD K+QVT +Y  ++G +V +    V++STQH E +    +   + + +IKP++P ++L+  T F +NP+GRFVIGGP GD GLTGRKII+DTYGG   HGGGAFSGKDP+KVDRS AY  R  AK+IVA+GLA RC
Sbjct:  131 TDVLMPAPITYAHRLVQRQAEVRKNGTLPWLRPDAKSQVTFQY--DDGKIVGI--DAVVLSTQHAEDIDQKSLQEAVMEEIIKPILPSEWLNTSTKFFINPTGRFVIGGPMGDCGLTGRKIIVDTYGGMARHGGGAFSGKDPSKVDRSAAYAARYVAKNIVAAGLADRC 295
[Close]
BLAST of FC930974 vs. ExPASy Swiss-Prot
Match: METK_SALDC (S-adenosylmethionine synthetase OS=Salmonella dublin (strain CT_02021853) GN=metK PE=3 SV=1)

HSP 1 Score: 187.193 bits (474), Expect = 3.780e-47
Identity = 93/169 (55.03%), Postives = 119/169 (70.41%), Query Frame = 3 
Query:    3 TPELMPLSHVLATKLGAKLTEVRKNGTCPWLRPDGKTQVTVEYYNENGAMVPVRVHTVLISTQHDETVTNDEIAADLKQHVIKPVIPDKYLDDKTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTYGGWXAHGGGAFSGKDPTKVDRSGAYIVRQAAKSIVASGLARRC 509
            T  LMP     A +L  +  EVRKNGT PWLRPD K+QVT +Y  ++G +V +    V++STQH E +    +   + + +IKP++P ++L+  T F +NP+GRFVIGGP GD GLTGRKII+DTYGG   HGGGAFSGKDP+KVDRS AY  R  AK+IVA+GLA RC
Sbjct:  131 TDVLMPAPITYAHRLVQRQAEVRKNGTLPWLRPDAKSQVTFQY--DDGKIVGI--DAVVLSTQHAEDIDQKSLQEAVMEEIIKPILPSEWLNTSTKFFINPTGRFVIGGPMGDCGLTGRKIIVDTYGGMARHGGGAFSGKDPSKVDRSAAYAARYVAKNIVAAGLADRC 295
[Close]
BLAST of FC930974 vs. ExPASy Swiss-Prot
Match: METK_SALCH (S-adenosylmethionine synthetase OS=Salmonella choleraesuis GN=metK PE=3 SV=1)

HSP 1 Score: 187.193 bits (474), Expect = 3.780e-47
Identity = 93/169 (55.03%), Postives = 119/169 (70.41%), Query Frame = 3 
Query:    3 TPELMPLSHVLATKLGAKLTEVRKNGTCPWLRPDGKTQVTVEYYNENGAMVPVRVHTVLISTQHDETVTNDEIAADLKQHVIKPVIPDKYLDDKTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTYGGWXAHGGGAFSGKDPTKVDRSGAYIVRQAAKSIVASGLARRC 509
            T  LMP     A +L  +  EVRKNGT PWLRPD K+QVT +Y  ++G +V +    V++STQH E +    +   + + +IKP++P ++L+  T F +NP+GRFVIGGP GD GLTGRKII+DTYGG   HGGGAFSGKDP+KVDRS AY  R  AK+IVA+GLA RC
Sbjct:  131 TDVLMPAPITYAHRLVQRQAEVRKNGTLPWLRPDAKSQVTFQY--DDGKIVGI--DAVVLSTQHAEDIDQKSLQEAVMEEIIKPILPSEWLNTSTKFFINPTGRFVIGGPMGDCGLTGRKIIVDTYGGMARHGGGAFSGKDPSKVDRSAAYAARYVAKNIVAAGLADRC 295
[Close]
BLAST of FC930974 vs. ExPASy Swiss-Prot
Match: METK_SALAR (S-adenosylmethionine synthetase OS=Salmonella arizonae (strain ATCC BAA-731 / CDC346-86 / RSK2980) GN=metK PE=3 SV=1)

HSP 1 Score: 187.193 bits (474), Expect = 3.780e-47
Identity = 93/169 (55.03%), Postives = 119/169 (70.41%), Query Frame = 3 
Query:    3 TPELMPLSHVLATKLGAKLTEVRKNGTCPWLRPDGKTQVTVEYYNENGAMVPVRVHTVLISTQHDETVTNDEIAADLKQHVIKPVIPDKYLDDKTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTYGGWXAHGGGAFSGKDPTKVDRSGAYIVRQAAKSIVASGLARRC 509
            T  LMP     A +L  +  EVRKNGT PWLRPD K+QVT +Y  ++G +V +    V++STQH E +    +   + + +IKP++P ++L+  T F +NP+GRFVIGGP GD GLTGRKII+DTYGG   HGGGAFSGKDP+KVDRS AY  R  AK+IVA+GLA RC
Sbjct:  131 TDVLMPAPITYAHRLVQRQAEVRKNGTLPWLRPDAKSQVTFQY--DDGKIVGI--DAVVLSTQHAEDIDQKSLQEAVMEEIIKPILPSEWLNTSTKFFINPTGRFVIGGPMGDCGLTGRKIIVDTYGGMARHGGGAFSGKDPSKVDRSAAYAARYVAKNIVAAGLADRC 295
[Close]
BLAST of FC930974 vs. ExPASy Swiss-Prot
Match: METK_SALA4 (S-adenosylmethionine synthetase OS=Salmonella agona (strain SL483) GN=metK PE=3 SV=1)

HSP 1 Score: 187.193 bits (474), Expect = 3.780e-47
Identity = 93/169 (55.03%), Postives = 119/169 (70.41%), Query Frame = 3 
Query:    3 TPELMPLSHVLATKLGAKLTEVRKNGTCPWLRPDGKTQVTVEYYNENGAMVPVRVHTVLISTQHDETVTNDEIAADLKQHVIKPVIPDKYLDDKTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTYGGWXAHGGGAFSGKDPTKVDRSGAYIVRQAAKSIVASGLARRC 509
            T  LMP     A +L  +  EVRKNGT PWLRPD K+QVT +Y  ++G +V +    V++STQH E +    +   + + +IKP++P ++L+  T F +NP+GRFVIGGP GD GLTGRKII+DTYGG   HGGGAFSGKDP+KVDRS AY  R  AK+IVA+GLA RC
Sbjct:  131 TDVLMPAPVTYAHRLVQRQAEVRKNGTLPWLRPDAKSQVTFQY--DDGKIVGI--DAVVLSTQHAEDIDQKSLQEAVMEEIIKPILPSEWLNTSTKFFINPTGRFVIGGPMGDCGLTGRKIIVDTYGGMARHGGGAFSGKDPSKVDRSAAYAARYVAKNIVAAGLADRC 295
The following BLAST results are available for this feature:
BLAST of FC930974 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
METK_SALPK3.780e-4755.03S-adenosylmethionine synthetase OS=Salmonella para... [more]
METK_SALPA3.780e-4755.03S-adenosylmethionine synthetase OS=Salmonella para... [more]
METK_SALNS3.780e-4755.03S-adenosylmethionine synthetase OS=Salmonella newp... [more]
METK_SALHS3.780e-4755.03S-adenosylmethionine synthetase OS=Salmonella heid... [more]
METK_SALG23.780e-4755.03S-adenosylmethionine synthetase OS=Salmonella gall... [more]
METK_SALEP3.780e-4755.03S-adenosylmethionine synthetase OS=Salmonella ente... [more]
METK_SALDC3.780e-4755.03S-adenosylmethionine synthetase OS=Salmonella dubl... [more]
METK_SALCH3.780e-4755.03S-adenosylmethionine synthetase OS=Salmonella chol... [more]
METK_SALAR3.780e-4755.03S-adenosylmethionine synthetase OS=Salmonella ariz... [more]
METK_SALA43.780e-4755.03S-adenosylmethionine synthetase OS=Salmonella agon... [more]

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Properties
Property NameValue
Genbank descriptionC34100A09EF PostHarvP1 Citrus clementina cDNA clone C34100A09, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC930974 ID=FC930974; Name=FC930974; organism=Citrus clementina; type=EST; length=513bp
GGACTCCTGAGTTGATGCCTTTGAGTCATGTGCTTGCAACAAAGCTTGGT
GCTAAGCTTACAGAAGTGAGGAAGAATGGGACCTGTCCGTGGCTGAGGCC
AGATGGCAAAACACAAGTCACTGTTGAGTATTACAATGAGAATGGCGCCA
TGGTTCCTGTTCGTGTCCATACTGTGCTCATCTCAACTCAGCACGATGAG
ACTGTAACTAATGATGAGATTGCTGCAGATCTCAAGCAACATGTGATCAA
GCCTGTGATTCCTGACAAGTACTTGGATGACAAAACTATTTTCCATCTTA
ACCCATCTGGCCGTTTTGTGATTGGTGGCCCTCACGGTGATGCTGGGCTC
ACCGGCCGGAAGATTATTATTGATACTTATGGTGGCTGGNGGGCACACGG
TGGTGGGGCTTTCTCAGGGAAAGATCCTACCAAGGTTGATAGAAGCGGTG
CTTACATTGTAAGGCAAGCTGCTAAGAGTATTGTGGCAAGCGGGCTTGCC
AGGAGATGCATTG
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