FC930974

Overview
NameFC930974
Unique NameFC930974
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length513
Libraries
Library NameType
PostHarvP1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of FC930974 vs. ExPASy Swiss-Prot
Match: METK_ECOLU (S-adenosylmethionine synthetase OS=Escherichia coli O17:K52:H18 (strain UMN026 / ExPEC) GN=metK PE=3 SV=1)

HSP 1 Score: 186.422 bits (472), Expect = 6.448e-47
Identity = 93/169 (55.03%), Postives = 118/169 (69.82%), Query Frame = 3 
Query:    3 TPELMPLSHVLATKLGAKLTEVRKNGTCPWLRPDGKTQVTVEYYNENGAMVPVRVHTVLISTQHDETVTNDEIAADLKQHVIKPVIPDKYLDDKTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTYGGWXAHGGGAFSGKDPTKVDRSGAYIVRQAAKSIVASGLARRC 509
            T  LMP     A +L  +  EVRKNGT PWLRPD K+QVT +Y  ++G +V +    V++STQH E +    +   + + +IKP++P ++L   T F +NP+GRFVIGGP GD GLTGRKII+DTYGG   HGGGAFSGKDP+KVDRS AY  R  AK+IVA+GLA RC
Sbjct:  131 TDVLMPAPITYAHRLVQRQAEVRKNGTLPWLRPDAKSQVTFQY--DDGKIVGI--DAVVLSTQHSEEIDQKSLQEAVMEEIIKPILPAEWLTSATKFFINPTGRFVIGGPMGDCGLTGRKIIVDTYGGMARHGGGAFSGKDPSKVDRSAAYAARYVAKNIVAAGLADRC 295
[Close]
BLAST of FC930974 vs. ExPASy Swiss-Prot
Match: METK_ECOLI (S-adenosylmethionine synthetase OS=Escherichia coli (strain K12) GN=metK PE=1 SV=2)

HSP 1 Score: 186.422 bits (472), Expect = 6.448e-47
Identity = 93/169 (55.03%), Postives = 118/169 (69.82%), Query Frame = 3 
Query:    3 TPELMPLSHVLATKLGAKLTEVRKNGTCPWLRPDGKTQVTVEYYNENGAMVPVRVHTVLISTQHDETVTNDEIAADLKQHVIKPVIPDKYLDDKTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTYGGWXAHGGGAFSGKDPTKVDRSGAYIVRQAAKSIVASGLARRC 509
            T  LMP     A +L  +  EVRKNGT PWLRPD K+QVT +Y  ++G +V +    V++STQH E +    +   + + +IKP++P ++L   T F +NP+GRFVIGGP GD GLTGRKII+DTYGG   HGGGAFSGKDP+KVDRS AY  R  AK+IVA+GLA RC
Sbjct:  131 TDVLMPAPITYAHRLVQRQAEVRKNGTLPWLRPDAKSQVTFQY--DDGKIVGI--DAVVLSTQHSEEIDQKSLQEAVMEEIIKPILPAEWLTSATKFFINPTGRFVIGGPMGDCGLTGRKIIVDTYGGMARHGGGAFSGKDPSKVDRSAAYAARYVAKNIVAAGLADRC 295
[Close]
BLAST of FC930974 vs. ExPASy Swiss-Prot
Match: METK_ECOLC (S-adenosylmethionine synthetase OS=Escherichia coli (strain ATCC 8739 / DSM 1576 / Crooks) GN=metK PE=3 SV=1)

HSP 1 Score: 186.422 bits (472), Expect = 6.448e-47
Identity = 93/169 (55.03%), Postives = 118/169 (69.82%), Query Frame = 3 
Query:    3 TPELMPLSHVLATKLGAKLTEVRKNGTCPWLRPDGKTQVTVEYYNENGAMVPVRVHTVLISTQHDETVTNDEIAADLKQHVIKPVIPDKYLDDKTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTYGGWXAHGGGAFSGKDPTKVDRSGAYIVRQAAKSIVASGLARRC 509
            T  LMP     A +L  +  EVRKNGT PWLRPD K+QVT +Y  ++G +V +    V++STQH E +    +   + + +IKP++P ++L   T F +NP+GRFVIGGP GD GLTGRKII+DTYGG   HGGGAFSGKDP+KVDRS AY  R  AK+IVA+GLA RC
Sbjct:  131 TDVLMPAPITYAHRLVQRQAEVRKNGTLPWLRPDAKSQVTFQY--DDGKIVGI--DAVVLSTQHSEEIDQKSLQEAVMEEIIKPILPAEWLTSATKFFINPTGRFVIGGPMGDCGLTGRKIIVDTYGGMARHGGGAFSGKDPSKVDRSAAYAARYVAKNIVAAGLADRC 295
[Close]
BLAST of FC930974 vs. ExPASy Swiss-Prot
Match: METK_ECOL6 (S-adenosylmethionine synthetase OS=Escherichia coli O6 GN=metK PE=3 SV=2)

HSP 1 Score: 186.422 bits (472), Expect = 6.448e-47
Identity = 93/169 (55.03%), Postives = 118/169 (69.82%), Query Frame = 3 
Query:    3 TPELMPLSHVLATKLGAKLTEVRKNGTCPWLRPDGKTQVTVEYYNENGAMVPVRVHTVLISTQHDETVTNDEIAADLKQHVIKPVIPDKYLDDKTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTYGGWXAHGGGAFSGKDPTKVDRSGAYIVRQAAKSIVASGLARRC 509
            T  LMP     A +L  +  EVRKNGT PWLRPD K+QVT +Y  ++G +V +    V++STQH E +    +   + + +IKP++P ++L   T F +NP+GRFVIGGP GD GLTGRKII+DTYGG   HGGGAFSGKDP+KVDRS AY  R  AK+IVA+GLA RC
Sbjct:  131 TDVLMPAPITYAHRLVQRQAEVRKNGTLPWLRPDAKSQVTFQY--DDGKIVGI--DAVVLSTQHSEEIDQKSLQEAVMEEIIKPILPAEWLTSATKFFINPTGRFVIGGPMGDCGLTGRKIIVDTYGGMARHGGGAFSGKDPSKVDRSAAYAARYVAKNIVAAGLADRC 295
[Close]
BLAST of FC930974 vs. ExPASy Swiss-Prot
Match: METK_ECOL5 (S-adenosylmethionine synthetase OS=Escherichia coli O6:K15:H31 (strain 536 / UPEC) GN=metK PE=3 SV=1)

HSP 1 Score: 186.422 bits (472), Expect = 6.448e-47
Identity = 93/169 (55.03%), Postives = 118/169 (69.82%), Query Frame = 3 
Query:    3 TPELMPLSHVLATKLGAKLTEVRKNGTCPWLRPDGKTQVTVEYYNENGAMVPVRVHTVLISTQHDETVTNDEIAADLKQHVIKPVIPDKYLDDKTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTYGGWXAHGGGAFSGKDPTKVDRSGAYIVRQAAKSIVASGLARRC 509
            T  LMP     A +L  +  EVRKNGT PWLRPD K+QVT +Y  ++G +V +    V++STQH E +    +   + + +IKP++P ++L   T F +NP+GRFVIGGP GD GLTGRKII+DTYGG   HGGGAFSGKDP+KVDRS AY  R  AK+IVA+GLA RC
Sbjct:  131 TDVLMPAPITYAHRLVQRQAEVRKNGTLPWLRPDAKSQVTFQY--DDGKIVGI--DAVVLSTQHSEEIDQKSLQEAVMEEIIKPILPAEWLTSATKFFINPTGRFVIGGPMGDCGLTGRKIIVDTYGGMARHGGGAFSGKDPSKVDRSAAYAARYVAKNIVAAGLADRC 295
[Close]
BLAST of FC930974 vs. ExPASy Swiss-Prot
Match: METK_ECOHS (S-adenosylmethionine synthetase OS=Escherichia coli O9:H4 (strain HS) GN=metK PE=3 SV=1)

HSP 1 Score: 186.422 bits (472), Expect = 6.448e-47
Identity = 93/169 (55.03%), Postives = 118/169 (69.82%), Query Frame = 3 
Query:    3 TPELMPLSHVLATKLGAKLTEVRKNGTCPWLRPDGKTQVTVEYYNENGAMVPVRVHTVLISTQHDETVTNDEIAADLKQHVIKPVIPDKYLDDKTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTYGGWXAHGGGAFSGKDPTKVDRSGAYIVRQAAKSIVASGLARRC 509
            T  LMP     A +L  +  EVRKNGT PWLRPD K+QVT +Y  ++G +V +    V++STQH E +    +   + + +IKP++P ++L   T F +NP+GRFVIGGP GD GLTGRKII+DTYGG   HGGGAFSGKDP+KVDRS AY  R  AK+IVA+GLA RC
Sbjct:  131 TDVLMPAPITYAHRLVQRQAEVRKNGTLPWLRPDAKSQVTFQY--DDGKIVGI--DAVVLSTQHSEEIDQKSLQEAVMEEIIKPILPAEWLTSATKFFINPTGRFVIGGPMGDCGLTGRKIIVDTYGGMARHGGGAFSGKDPSKVDRSAAYAARYVAKNIVAAGLADRC 295
[Close]
BLAST of FC930974 vs. ExPASy Swiss-Prot
Match: METK_ECODH (S-adenosylmethionine synthetase OS=Escherichia coli (strain K12 / DH10B) GN=metK PE=3 SV=1)

HSP 1 Score: 186.422 bits (472), Expect = 6.448e-47
Identity = 93/169 (55.03%), Postives = 118/169 (69.82%), Query Frame = 3 
Query:    3 TPELMPLSHVLATKLGAKLTEVRKNGTCPWLRPDGKTQVTVEYYNENGAMVPVRVHTVLISTQHDETVTNDEIAADLKQHVIKPVIPDKYLDDKTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTYGGWXAHGGGAFSGKDPTKVDRSGAYIVRQAAKSIVASGLARRC 509
            T  LMP     A +L  +  EVRKNGT PWLRPD K+QVT +Y  ++G +V +    V++STQH E +    +   + + +IKP++P ++L   T F +NP+GRFVIGGP GD GLTGRKII+DTYGG   HGGGAFSGKDP+KVDRS AY  R  AK+IVA+GLA RC
Sbjct:  131 TDVLMPAPITYAHRLVQRQAEVRKNGTLPWLRPDAKSQVTFQY--DDGKIVGI--DAVVLSTQHSEEIDQKSLQEAVMEEIIKPILPAEWLTSATKFFINPTGRFVIGGPMGDCGLTGRKIIVDTYGGMARHGGGAFSGKDPSKVDRSAAYAARYVAKNIVAAGLADRC 295
[Close]
BLAST of FC930974 vs. ExPASy Swiss-Prot
Match: METK_ECOBW (S-adenosylmethionine synthetase OS=Escherichia coli (strain K12 / BW2952) GN=metK PE=3 SV=1)

HSP 1 Score: 186.422 bits (472), Expect = 6.448e-47
Identity = 93/169 (55.03%), Postives = 118/169 (69.82%), Query Frame = 3 
Query:    3 TPELMPLSHVLATKLGAKLTEVRKNGTCPWLRPDGKTQVTVEYYNENGAMVPVRVHTVLISTQHDETVTNDEIAADLKQHVIKPVIPDKYLDDKTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTYGGWXAHGGGAFSGKDPTKVDRSGAYIVRQAAKSIVASGLARRC 509
            T  LMP     A +L  +  EVRKNGT PWLRPD K+QVT +Y  ++G +V +    V++STQH E +    +   + + +IKP++P ++L   T F +NP+GRFVIGGP GD GLTGRKII+DTYGG   HGGGAFSGKDP+KVDRS AY  R  AK+IVA+GLA RC
Sbjct:  131 TDVLMPAPITYAHRLVQRQAEVRKNGTLPWLRPDAKSQVTFQY--DDGKIVGI--DAVVLSTQHSEEIDQKSLQEAVMEEIIKPILPAEWLTSATKFFINPTGRFVIGGPMGDCGLTGRKIIVDTYGGMARHGGGAFSGKDPSKVDRSAAYAARYVAKNIVAAGLADRC 295
[Close]
BLAST of FC930974 vs. ExPASy Swiss-Prot
Match: METK_ECO8A (S-adenosylmethionine synthetase OS=Escherichia coli O8 (strain IAI1) GN=metK PE=3 SV=1)

HSP 1 Score: 186.422 bits (472), Expect = 6.448e-47
Identity = 93/169 (55.03%), Postives = 118/169 (69.82%), Query Frame = 3 
Query:    3 TPELMPLSHVLATKLGAKLTEVRKNGTCPWLRPDGKTQVTVEYYNENGAMVPVRVHTVLISTQHDETVTNDEIAADLKQHVIKPVIPDKYLDDKTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTYGGWXAHGGGAFSGKDPTKVDRSGAYIVRQAAKSIVASGLARRC 509
            T  LMP     A +L  +  EVRKNGT PWLRPD K+QVT +Y  ++G +V +    V++STQH E +    +   + + +IKP++P ++L   T F +NP+GRFVIGGP GD GLTGRKII+DTYGG   HGGGAFSGKDP+KVDRS AY  R  AK+IVA+GLA RC
Sbjct:  131 TDVLMPAPITYAHRLVQRQAEVRKNGTLPWLRPDAKSQVTFQY--DDGKIVGI--DAVVLSTQHSEEIDQKSLQEAVMEEIIKPILPAEWLTSATKFFINPTGRFVIGGPMGDCGLTGRKIIVDTYGGMARHGGGAFSGKDPSKVDRSAAYAARYVAKNIVAAGLADRC 295
[Close]
BLAST of FC930974 vs. ExPASy Swiss-Prot
Match: METK_ECO7I (S-adenosylmethionine synthetase OS=Escherichia coli O7:K1 (strain IAI39 / ExPEC) GN=metK PE=3 SV=1)

HSP 1 Score: 186.422 bits (472), Expect = 6.448e-47
Identity = 93/169 (55.03%), Postives = 118/169 (69.82%), Query Frame = 3 
Query:    3 TPELMPLSHVLATKLGAKLTEVRKNGTCPWLRPDGKTQVTVEYYNENGAMVPVRVHTVLISTQHDETVTNDEIAADLKQHVIKPVIPDKYLDDKTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTYGGWXAHGGGAFSGKDPTKVDRSGAYIVRQAAKSIVASGLARRC 509
            T  LMP     A +L  +  EVRKNGT PWLRPD K+QVT +Y  ++G +V +    V++STQH E +    +   + + +IKP++P ++L   T F +NP+GRFVIGGP GD GLTGRKII+DTYGG   HGGGAFSGKDP+KVDRS AY  R  AK+IVA+GLA RC
Sbjct:  131 TDVLMPAPITYAHRLVQRQAEVRKNGTLPWLRPDAKSQVTFQY--DDGKIVGI--DAVVLSTQHSEEIDQKSLQEAVMEEIIKPILPAEWLTSATKFFINPTGRFVIGGPMGDCGLTGRKIIVDTYGGMARHGGGAFSGKDPSKVDRSAAYAARYVAKNIVAAGLADRC 295
The following BLAST results are available for this feature:
BLAST of FC930974 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
METK_ECOLU6.448e-4755.03S-adenosylmethionine synthetase OS=Escherichia col... [more]
METK_ECOLI6.448e-4755.03S-adenosylmethionine synthetase OS=Escherichia col... [more]
METK_ECOLC6.448e-4755.03S-adenosylmethionine synthetase OS=Escherichia col... [more]
METK_ECOL66.448e-4755.03S-adenosylmethionine synthetase OS=Escherichia col... [more]
METK_ECOL56.448e-4755.03S-adenosylmethionine synthetase OS=Escherichia col... [more]
METK_ECOHS6.448e-4755.03S-adenosylmethionine synthetase OS=Escherichia col... [more]
METK_ECODH6.448e-4755.03S-adenosylmethionine synthetase OS=Escherichia col... [more]
METK_ECOBW6.448e-4755.03S-adenosylmethionine synthetase OS=Escherichia col... [more]
METK_ECO8A6.448e-4755.03S-adenosylmethionine synthetase OS=Escherichia col... [more]
METK_ECO7I6.448e-4755.03S-adenosylmethionine synthetase OS=Escherichia col... [more]

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Properties
Property NameValue
Genbank descriptionC34100A09EF PostHarvP1 Citrus clementina cDNA clone C34100A09, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC930974 ID=FC930974; Name=FC930974; organism=Citrus clementina; type=EST; length=513bp
GGACTCCTGAGTTGATGCCTTTGAGTCATGTGCTTGCAACAAAGCTTGGT
GCTAAGCTTACAGAAGTGAGGAAGAATGGGACCTGTCCGTGGCTGAGGCC
AGATGGCAAAACACAAGTCACTGTTGAGTATTACAATGAGAATGGCGCCA
TGGTTCCTGTTCGTGTCCATACTGTGCTCATCTCAACTCAGCACGATGAG
ACTGTAACTAATGATGAGATTGCTGCAGATCTCAAGCAACATGTGATCAA
GCCTGTGATTCCTGACAAGTACTTGGATGACAAAACTATTTTCCATCTTA
ACCCATCTGGCCGTTTTGTGATTGGTGGCCCTCACGGTGATGCTGGGCTC
ACCGGCCGGAAGATTATTATTGATACTTATGGTGGCTGGNGGGCACACGG
TGGTGGGGCTTTCTCAGGGAAAGATCCTACCAAGGTTGATAGAAGCGGTG
CTTACATTGTAAGGCAAGCTGCTAAGAGTATTGTGGCAAGCGGGCTTGCC
AGGAGATGCATTG
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