FC930974

Overview
NameFC930974
Unique NameFC930974
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length513
Libraries
Library NameType
PostHarvP1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of FC930974 vs. ExPASy Swiss-Prot
Match: METK_ECO5E (S-adenosylmethionine synthetase OS=Escherichia coli O157:H7 (strain EC4115 / EHEC) GN=metK PE=3 SV=1)

HSP 1 Score: 186.422 bits (472), Expect = 6.448e-47
Identity = 93/169 (55.03%), Postives = 118/169 (69.82%), Query Frame = 3 
Query:    3 TPELMPLSHVLATKLGAKLTEVRKNGTCPWLRPDGKTQVTVEYYNENGAMVPVRVHTVLISTQHDETVTNDEIAADLKQHVIKPVIPDKYLDDKTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTYGGWXAHGGGAFSGKDPTKVDRSGAYIVRQAAKSIVASGLARRC 509
            T  LMP     A +L  +  EVRKNGT PWLRPD K+QVT +Y  ++G +V +    V++STQH E +    +   + + +IKP++P ++L   T F +NP+GRFVIGGP GD GLTGRKII+DTYGG   HGGGAFSGKDP+KVDRS AY  R  AK+IVA+GLA RC
Sbjct:  131 TDVLMPAPITYAHRLVQRQAEVRKNGTLPWLRPDAKSQVTFQY--DDGKIVGI--DAVVLSTQHSEEIDQKSLQEAVMEEIIKPILPAEWLTSATKFFINPTGRFVIGGPMGDCGLTGRKIIVDTYGGMARHGGGAFSGKDPSKVDRSAAYAARYVAKNIVAAGLADRC 295
[Close]
BLAST of FC930974 vs. ExPASy Swiss-Prot
Match: METK_ECO57 (S-adenosylmethionine synthetase OS=Escherichia coli O157:H7 GN=metK PE=3 SV=2)

HSP 1 Score: 186.422 bits (472), Expect = 6.448e-47
Identity = 93/169 (55.03%), Postives = 118/169 (69.82%), Query Frame = 3 
Query:    3 TPELMPLSHVLATKLGAKLTEVRKNGTCPWLRPDGKTQVTVEYYNENGAMVPVRVHTVLISTQHDETVTNDEIAADLKQHVIKPVIPDKYLDDKTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTYGGWXAHGGGAFSGKDPTKVDRSGAYIVRQAAKSIVASGLARRC 509
            T  LMP     A +L  +  EVRKNGT PWLRPD K+QVT +Y  ++G +V +    V++STQH E +    +   + + +IKP++P ++L   T F +NP+GRFVIGGP GD GLTGRKII+DTYGG   HGGGAFSGKDP+KVDRS AY  R  AK+IVA+GLA RC
Sbjct:  131 TDVLMPAPITYAHRLVQRQAEVRKNGTLPWLRPDAKSQVTFQY--DDGKIVGI--DAVVLSTQHSEEIDQKSLQEAVMEEIIKPILPAEWLTSATKFFINPTGRFVIGGPMGDCGLTGRKIIVDTYGGMARHGGGAFSGKDPSKVDRSAAYAARYVAKNIVAAGLADRC 295
[Close]
BLAST of FC930974 vs. ExPASy Swiss-Prot
Match: METK_ECO55 (S-adenosylmethionine synthetase OS=Escherichia coli (strain 55989 / EAEC) GN=metK PE=3 SV=1)

HSP 1 Score: 186.422 bits (472), Expect = 6.448e-47
Identity = 93/169 (55.03%), Postives = 118/169 (69.82%), Query Frame = 3 
Query:    3 TPELMPLSHVLATKLGAKLTEVRKNGTCPWLRPDGKTQVTVEYYNENGAMVPVRVHTVLISTQHDETVTNDEIAADLKQHVIKPVIPDKYLDDKTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTYGGWXAHGGGAFSGKDPTKVDRSGAYIVRQAAKSIVASGLARRC 509
            T  LMP     A +L  +  EVRKNGT PWLRPD K+QVT +Y  ++G +V +    V++STQH E +    +   + + +IKP++P ++L   T F +NP+GRFVIGGP GD GLTGRKII+DTYGG   HGGGAFSGKDP+KVDRS AY  R  AK+IVA+GLA RC
Sbjct:  131 TDVLMPAPITYAHRLVQRQAEVRKNGTLPWLRPDAKSQVTFQY--DDGKIVGI--DAVVLSTQHSEEIDQKSLQEAVMEEIIKPILPAEWLTSATKFFINPTGRFVIGGPMGDCGLTGRKIIVDTYGGMARHGGGAFSGKDPSKVDRSAAYAARYVAKNIVAAGLADRC 295
[Close]
BLAST of FC930974 vs. ExPASy Swiss-Prot
Match: METK_ECO27 (S-adenosylmethionine synthetase OS=Escherichia coli O127:H6 (strain E2348/69 / EPEC) GN=metK PE=3 SV=1)

HSP 1 Score: 186.422 bits (472), Expect = 6.448e-47
Identity = 93/169 (55.03%), Postives = 118/169 (69.82%), Query Frame = 3 
Query:    3 TPELMPLSHVLATKLGAKLTEVRKNGTCPWLRPDGKTQVTVEYYNENGAMVPVRVHTVLISTQHDETVTNDEIAADLKQHVIKPVIPDKYLDDKTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTYGGWXAHGGGAFSGKDPTKVDRSGAYIVRQAAKSIVASGLARRC 509
            T  LMP     A +L  +  EVRKNGT PWLRPD K+QVT +Y  ++G +V +    V++STQH E +    +   + + +IKP++P ++L   T F +NP+GRFVIGGP GD GLTGRKII+DTYGG   HGGGAFSGKDP+KVDRS AY  R  AK+IVA+GLA RC
Sbjct:  131 TDVLMPAPITYAHRLVQRQAEVRKNGTLPWLRPDAKSQVTFQY--DDGKIVGI--DAVVLSTQHSEEIDQKSLQEAVMEEIIKPILPAEWLTSATKFFINPTGRFVIGGPMGDCGLTGRKIIVDTYGGMARHGGGAFSGKDPSKVDRSAAYAARYVAKNIVAAGLADRC 295
[Close]
BLAST of FC930974 vs. ExPASy Swiss-Prot
Match: METK_ECO24 (S-adenosylmethionine synthetase OS=Escherichia coli O139:H28 (strain E24377A / ETEC) GN=metK PE=3 SV=1)

HSP 1 Score: 186.422 bits (472), Expect = 6.448e-47
Identity = 93/169 (55.03%), Postives = 118/169 (69.82%), Query Frame = 3 
Query:    3 TPELMPLSHVLATKLGAKLTEVRKNGTCPWLRPDGKTQVTVEYYNENGAMVPVRVHTVLISTQHDETVTNDEIAADLKQHVIKPVIPDKYLDDKTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTYGGWXAHGGGAFSGKDPTKVDRSGAYIVRQAAKSIVASGLARRC 509
            T  LMP     A +L  +  EVRKNGT PWLRPD K+QVT +Y  ++G +V +    V++STQH E +    +   + + +IKP++P ++L   T F +NP+GRFVIGGP GD GLTGRKII+DTYGG   HGGGAFSGKDP+KVDRS AY  R  AK+IVA+GLA RC
Sbjct:  131 TDVLMPAPITYAHRLVQRQAEVRKNGTLPWLRPDAKSQVTFQY--DDGKIVGI--DAVVLSTQHSEEIDQKSLQEAVMEEIIKPILPAEWLTSATKFFINPTGRFVIGGPMGDCGLTGRKIIVDTYGGMARHGGGAFSGKDPSKVDRSAAYAARYVAKNIVAAGLADRC 295
[Close]
BLAST of FC930974 vs. ExPASy Swiss-Prot
Match: METK_DESPS (S-adenosylmethionine synthetase OS=Desulfotalea psychrophila GN=metK PE=3 SV=1)

HSP 1 Score: 186.422 bits (472), Expect = 6.448e-47
Identity = 89/166 (53.61%), Postives = 120/166 (72.29%), Query Frame = 3 
Query:    3 TPELMPLSHVLATKLGAKLTEVRKNGTCPWLRPDGKTQVTVEYYNENGAMVPVRVHTVLISTQHDETVTNDEIAADLKQHVIKPVIPDKYLDDKTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTYGGWXAHGGGAFSGKDPTKVDRSGAYIVRQAAKSIVASGLA 500
            T  LMP+   LA +L  +  +VRK+   PWLRPD K+QVT+EY N+    +P R+  V++STQHDE+++ +++   + + +IKP +P   +D  T F +NP+GRFVIGGP GD GLTGRKII+DTYGG   HGGGAFSGKDP+KVDRS AY  R  AK++VA+G+A
Sbjct:  144 TDVLMPMPITLAHRLTRRQAQVRKSSILPWLRPDAKSQVTIEYENK----IPKRIDAVVLSTQHDESISYNDLKEAVMEEIIKPTLPADMIDANTKFFINPTGRFVIGGPVGDCGLTGRKIIVDTYGGKALHGGGAFSGKDPSKVDRSSAYYGRYVAKNLVAAGIA 305
[Close]
BLAST of FC930974 vs. ExPASy Swiss-Prot
Match: METK_BRAHW (S-adenosylmethionine synthetase OS=Brachyspira hyodysenteriae (strain ATCC 49526 / WA1) GN=metK PE=3 SV=1)

HSP 1 Score: 186.422 bits (472), Expect = 6.448e-47
Identity = 94/170 (55.29%), Postives = 121/170 (71.18%), Query Frame = 3 
Query:    3 TPELMPLSHVLATKLGAKLTEVRKNGTCPWLRPDGKTQVTVEYYNENGAMVPVRVHTVLISTQHDETVTNDEIAADLKQHVIKPVIPDKYLDDKTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTYGGWXAHGGGAFSGKDPTKVDRSGAYIVRQAAKSIVASGLARRCI 512
            T   MPL+  LA +L  +LT+VRK+    +LRPDGK+QVTVEY +   A    R+  V+ISTQH   V + +I AD+K++VI  + P   LD  T +++NP+G FV+GGP GD GLTGRKII+D+YGG  AHGGGAFSGKDPTKVDRS  Y+ R  AK+IVASG+A R +
Sbjct:  142 TETFMPLTIHLAHRLAERLTKVRKDKVVDYLRPDGKSQVTVEYKDGKAA----RIEAVVISTQHAAGVDHKQIEADIKKYVINEICPANMLDSNTKYYINPTGSFVVGGPMGDCGLTGRKIIVDSYGGHGAHGGGAFSGKDPTKVDRSACYMARYVAKNIVASGIADRAL 307
[Close]
BLAST of FC930974 vs. ExPASy Swiss-Prot
Match: METK_SYNP6 (S-adenosylmethionine synthetase OS=Synechococcus sp. (strain ATCC 27144 / PCC 6301 / SAUG 1402/1) GN=metK PE=3 SV=1)

HSP 1 Score: 186.037 bits (471), Expect = 8.422e-47
Identity = 100/178 (56.18%), Postives = 122/178 (68.54%), Query Frame = 3 
Query:    6 PELMPLSHVLATKLGAKLTEVRKNGTCPWLRPDGKTQVTVEYYNENGAMVPVRVHTVLISTQH--------DETVTNDEIAADLKQHVIKPVIPDKYL--DDKTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTYGGWXAHGGGAFSGKDPTKVDRSGAYIVRQAAKSIVASGLARRC 509
            PELMPL   L+ +L  +L  VR NG   +LRPDGKTQVT+ Y  E+G   PV + T+LISTQH        D+    + I +DL + V+ PV  D  +  D  T F +NP+G+FVIGGP GDAGLTGRKII+DTYGG+  HGGGAFSGKDPTKVDRS AY  R  AK+IVA+GLA +C
Sbjct:  132 PELMPLPISLSHRLARQLAVVRHNGQLDYLRPDGKTQVTIAY--EDGK--PVAIDTILISTQHKAAIGDISDDNAVQERIKSDLWEQVVLPVFSDLVIQPDSATRFLVNPTGKFVIGGPQGDAGLTGRKIIVDTYGGYSRHGGGAFSGKDPTKVDRSAAYACRYVAKNIVAAGLAEKC 305
[Close]
BLAST of FC930974 vs. ExPASy Swiss-Prot
Match: METK_SYNE7 (S-adenosylmethionine synthetase OS=Synechococcus elongatus (strain PCC 7942) GN=metK PE=3 SV=1)

HSP 1 Score: 186.037 bits (471), Expect = 8.422e-47
Identity = 100/178 (56.18%), Postives = 122/178 (68.54%), Query Frame = 3 
Query:    6 PELMPLSHVLATKLGAKLTEVRKNGTCPWLRPDGKTQVTVEYYNENGAMVPVRVHTVLISTQH--------DETVTNDEIAADLKQHVIKPVIPDKYL--DDKTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTYGGWXAHGGGAFSGKDPTKVDRSGAYIVRQAAKSIVASGLARRC 509
            PELMPL   L+ +L  +L  VR NG   +LRPDGKTQVT+ Y  E+G   PV + T+LISTQH        D+    + I +DL + V+ PV  D  +  D  T F +NP+G+FVIGGP GDAGLTGRKII+DTYGG+  HGGGAFSGKDPTKVDRS AY  R  AK+IVA+GLA +C
Sbjct:  143 PELMPLPISLSHRLARQLAVVRHNGQLDYLRPDGKTQVTIAY--EDGK--PVAIDTILISTQHKAAIGDISDDNAVQERIKSDLWEQVVLPVFSDLVIQPDSATRFLVNPTGKFVIGGPQGDAGLTGRKIIVDTYGGYSRHGGGAFSGKDPTKVDRSAAYACRYVAKNIVAAGLAEKC 316
[Close]
BLAST of FC930974 vs. ExPASy Swiss-Prot
Match: METK_SALAI (S-adenosylmethionine synthetase OS=Salinispora arenicola (strain CNS-205) GN=metK PE=3 SV=1)

HSP 1 Score: 186.037 bits (471), Expect = 8.422e-47
Identity = 98/173 (56.65%), Postives = 124/173 (71.68%), Query Frame = 3 
Query:    3 TPELMPLSHVLATKLGAKLTEVRKNGTCPWLRPDGKTQVTVEYYNENGAMVPVRVHTVLISTQHDETVTNDEIAA-DLKQHVIKPVIPDKYLD-DKTIFHL--NPSGRFVIGGPHGDAGLTGRKIIIDTYGGWXAHGGGAFSGKDPTKVDRSGAYIVRQAAKSIVASGLARRC 509
            TPELMP+   LA +L  +L +VR+ G  P+LRPDGKTQVTVEY      + PVR++TVL+S+QH   V+ D +   D++ HVI P +    L  D   + L  NP+GRF +GGP GDAGLTGRKII+DTYGG+  HGGGAFSGKDP+KVDRS AY +R  AK++VA+GLA RC
Sbjct:  141 TPELMPMPIALAHRLSRRLAQVRREGVVPYLRPDGKTQVTVEYEG----LRPVRLNTVLVSSQHAADVSLDSLLTPDIRDHVIAPEVEGLGLGLDVEDYRLLVNPTGRFEVGGPMGDAGLTGRKIIVDTYGGYARHGGGAFSGKDPSKVDRSAAYAMRWVAKNVVAAGLAERC 309
The following BLAST results are available for this feature:
BLAST of FC930974 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
METK_ECO5E6.448e-4755.03S-adenosylmethionine synthetase OS=Escherichia col... [more]
METK_ECO576.448e-4755.03S-adenosylmethionine synthetase OS=Escherichia col... [more]
METK_ECO556.448e-4755.03S-adenosylmethionine synthetase OS=Escherichia col... [more]
METK_ECO276.448e-4755.03S-adenosylmethionine synthetase OS=Escherichia col... [more]
METK_ECO246.448e-4755.03S-adenosylmethionine synthetase OS=Escherichia col... [more]
METK_DESPS6.448e-4753.61S-adenosylmethionine synthetase OS=Desulfotalea ps... [more]
METK_BRAHW6.448e-4755.29S-adenosylmethionine synthetase OS=Brachyspira hyo... [more]
METK_SYNP68.422e-4756.18S-adenosylmethionine synthetase OS=Synechococcus s... [more]
METK_SYNE78.422e-4756.18S-adenosylmethionine synthetase OS=Synechococcus e... [more]
METK_SALAI8.422e-4756.65S-adenosylmethionine synthetase OS=Salinispora are... [more]

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Properties
Property NameValue
Genbank descriptionC34100A09EF PostHarvP1 Citrus clementina cDNA clone C34100A09, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC930974 ID=FC930974; Name=FC930974; organism=Citrus clementina; type=EST; length=513bp
GGACTCCTGAGTTGATGCCTTTGAGTCATGTGCTTGCAACAAAGCTTGGT
GCTAAGCTTACAGAAGTGAGGAAGAATGGGACCTGTCCGTGGCTGAGGCC
AGATGGCAAAACACAAGTCACTGTTGAGTATTACAATGAGAATGGCGCCA
TGGTTCCTGTTCGTGTCCATACTGTGCTCATCTCAACTCAGCACGATGAG
ACTGTAACTAATGATGAGATTGCTGCAGATCTCAAGCAACATGTGATCAA
GCCTGTGATTCCTGACAAGTACTTGGATGACAAAACTATTTTCCATCTTA
ACCCATCTGGCCGTTTTGTGATTGGTGGCCCTCACGGTGATGCTGGGCTC
ACCGGCCGGAAGATTATTATTGATACTTATGGTGGCTGGNGGGCACACGG
TGGTGGGGCTTTCTCAGGGAAAGATCCTACCAAGGTTGATAGAAGCGGTG
CTTACATTGTAAGGCAAGCTGCTAAGAGTATTGTGGCAAGCGGGCTTGCC
AGGAGATGCATTG
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