FC930974

Overview
NameFC930974
Unique NameFC930974
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length513
Libraries
Library NameType
PostHarvP1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of FC930974 vs. ExPASy Swiss-Prot
Match: METK2_BETVU (S-adenosylmethionine synthetase 2 OS=Beta vulgaris GN=SAMS2 PE=2 SV=1)

HSP 1 Score: 330.872 bits (847), Expect = 2.117e-90
Identity = 159/170 (93.53%), Postives = 166/170 (97.65%), Query Frame = 3 
Query:    3 TPELMPLSHVLATKLGAKLTEVRKNGTCPWLRPDGKTQVTVEYYNENGAMVPVRVHTVLISTQHDETVTNDEIAADLKQHVIKPVIPDKYLDDKTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTYGGWXAHGGGAFSGKDPTKVDRSGAYIVRQAAKSIVASGLARRCI 512
            TPELMPLSHVLATKLGA+LTEVRKNG C WLRPDGKTQVTVEYYN+NGAMVPVRVHTVLISTQHDETV+NDEIAADLK+HVIKPVIP+KYLD+KTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTYGGW AHGGGAFSGKDPTKVDRSGAYIVRQAAKSIVA+GLARR I
Sbjct:  134 TPELMPLSHVLATKLGARLTEVRKNGACAWLRPDGKTQVTVEYYNDNGAMVPVRVHTVLISTQHDETVSNDEIAADLKEHVIKPVIPEKYLDEKTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTYGGWGAHGGGAFSGKDPTKVDRSGAYIVRQAAKSIVANGLARRAI 303
[Close]
BLAST of FC930974 vs. ExPASy Swiss-Prot
Match: METK2_ARATH (S-adenosylmethionine synthetase 2 OS=Arabidopsis thaliana GN=SAM2 PE=1 SV=1)

HSP 1 Score: 330.487 bits (846), Expect = 2.765e-90
Identity = 156/170 (91.76%), Postives = 166/170 (97.65%), Query Frame = 3 
Query:    3 TPELMPLSHVLATKLGAKLTEVRKNGTCPWLRPDGKTQVTVEYYNENGAMVPVRVHTVLISTQHDETVTNDEIAADLKQHVIKPVIPDKYLDDKTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTYGGWXAHGGGAFSGKDPTKVDRSGAYIVRQAAKSIVASGLARRCI 512
            TPELMPLSHVLATK+GA+LTEVRKNGTC WLRPDGKTQVTVEYYN+NGAMVPVRVHTVLISTQHDETVTNDEIA DLK+HVIKP+IP+KYLDDKTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTYGGW AHGGGAFSGKDPTKVDRSGAYIVRQAAKS+VA+G+ARR +
Sbjct:  134 TPELMPLSHVLATKIGARLTEVRKNGTCRWLRPDGKTQVTVEYYNDNGAMVPVRVHTVLISTQHDETVTNDEIARDLKEHVIKPIIPEKYLDDKTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTYGGWGAHGGGAFSGKDPTKVDRSGAYIVRQAAKSVVANGMARRAL 303
[Close]
BLAST of FC930974 vs. ExPASy Swiss-Prot
Match: METK4_HORVU (S-adenosylmethionine synthetase 4 OS=Hordeum vulgare GN=SAM4 PE=2 SV=1)

HSP 1 Score: 330.102 bits (845), Expect = 3.611e-90
Identity = 156/170 (91.76%), Postives = 165/170 (97.06%), Query Frame = 3 
Query:    3 TPELMPLSHVLATKLGAKLTEVRKNGTCPWLRPDGKTQVTVEYYNENGAMVPVRVHTVLISTQHDETVTNDEIAADLKQHVIKPVIPDKYLDDKTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTYGGWXAHGGGAFSGKDPTKVDRSGAYIVRQAAKSIVASGLARRCI 512
            TPE MPLSHVLATKLGA+LTEVRKN TCPWLRPDGKTQVTVEY+N+NGAMVP+RVHTVLISTQHDETVTNDEIAADLK+HVIKPVIP++YLD+ TIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTYGGW AHGGGAFSGKDPTKVDRSGAYI RQAAKSIVASG+ARRCI
Sbjct:  137 TPEFMPLSHVLATKLGARLTEVRKNATCPWLRPDGKTQVTVEYHNDNGAMVPIRVHTVLISTQHDETVTNDEIAADLKEHVIKPVIPEQYLDENTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTYGGWGAHGGGAFSGKDPTKVDRSGAYIARQAAKSIVASGIARRCI 306
[Close]
BLAST of FC930974 vs. ExPASy Swiss-Prot
Match: METK_WHEAT (S-adenosylmethionine synthetase OS=Triticum aestivum GN=SAMS PE=2 SV=1)

HSP 1 Score: 329.717 bits (844), Expect = 4.716e-90
Identity = 155/170 (91.18%), Postives = 165/170 (97.06%), Query Frame = 3 
Query:    3 TPELMPLSHVLATKLGAKLTEVRKNGTCPWLRPDGKTQVTVEYYNENGAMVPVRVHTVLISTQHDETVTNDEIAADLKQHVIKPVIPDKYLDDKTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTYGGWXAHGGGAFSGKDPTKVDRSGAYIVRQAAKSIVASGLARRCI 512
            TPE MPLSHVLATKLGA+LTEVRKN TCPWLRPDGKTQVTVEY+N+NGAMVP+RVHTVLISTQHDETVTNDEIAADLK+HVIKPVIP++YLD+ TIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTYGGW AHGGGAFSGKDPTKVDRSGAY+ RQAAKSIVASG+ARRCI
Sbjct:  137 TPEFMPLSHVLATKLGARLTEVRKNATCPWLRPDGKTQVTVEYHNDNGAMVPIRVHTVLISTQHDETVTNDEIAADLKEHVIKPVIPEQYLDENTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTYGGWGAHGGGAFSGKDPTKVDRSGAYVARQAAKSIVASGIARRCI 306
[Close]
BLAST of FC930974 vs. ExPASy Swiss-Prot
Match: METK_SOLBR (S-adenosylmethionine synthetase OS=Solanum brevidens GN=SAMS PE=2 SV=1)

HSP 1 Score: 329.717 bits (844), Expect = 4.716e-90
Identity = 157/170 (92.35%), Postives = 165/170 (97.06%), Query Frame = 3 
Query:    3 TPELMPLSHVLATKLGAKLTEVRKNGTCPWLRPDGKTQVTVEYYNENGAMVPVRVHTVLISTQHDETVTNDEIAADLKQHVIKPVIPDKYLDDKTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTYGGWXAHGGGAFSGKDPTKVDRSGAYIVRQAAKSIVASGLARRCI 512
            TPELMPLSHVLATKLGA+LTEVRKNGTC WL+PDGKTQVTVEY N+NGAM+P+RVHTVLISTQHDETVTNDEIA DLK+H IKPVIP+KYLD+KTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTYGGW AHGGGAFSGKDPTKVDRSGAYIVRQAAKSIVASGLARRCI
Sbjct:  134 TPELMPLSHVLATKLGARLTEVRKNGTCRWLKPDGKTQVTVEYCNDNGAMIPIRVHTVLISTQHDETVTNDEIARDLKEHAIKPVIPEKYLDEKTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTYGGWGAHGGGAFSGKDPTKVDRSGAYIVRQAAKSIVASGLARRCI 303
[Close]
BLAST of FC930974 vs. ExPASy Swiss-Prot
Match: METK_MUSAC (S-adenosylmethionine synthetase OS=Musa acuminata GN=METK PE=2 SV=1)

HSP 1 Score: 329.717 bits (844), Expect = 4.716e-90
Identity = 157/170 (92.35%), Postives = 166/170 (97.65%), Query Frame = 3 
Query:    3 TPELMPLSHVLATKLGAKLTEVRKNGTCPWLRPDGKTQVTVEYYNENGAMVPVRVHTVLISTQHDETVTNDEIAADLKQHVIKPVIPDKYLDDKTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTYGGWXAHGGGAFSGKDPTKVDRSGAYIVRQAAKSIVASGLARRCI 512
            TPELMPLSHVLATKLGA+LTEVRKNGTCPWLRPDGKTQVTVEY N++GAM+PVRVHTVLISTQHDETVTNDEIAADLK+HVIKPVIP++YLD+KTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTYGGW AHGGGAFSGKDPTKVDRSGAY+ RQAAKSIVAS LARRCI
Sbjct:  135 TPELMPLSHVLATKLGARLTEVRKNGTCPWLRPDGKTQVTVEYRNDHGAMIPVRVHTVLISTQHDETVTNDEIAADLKEHVIKPVIPEQYLDEKTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTYGGWGAHGGGAFSGKDPTKVDRSGAYVARQAAKSIVASELARRCI 304
[Close]
BLAST of FC930974 vs. ExPASy Swiss-Prot
Match: METK2_PINCO (S-adenosylmethionine synthetase 2 OS=Pinus contorta GN=SAMS2 PE=2 SV=1)

HSP 1 Score: 329.717 bits (844), Expect = 4.716e-90
Identity = 157/170 (92.35%), Postives = 165/170 (97.06%), Query Frame = 3 
Query:    3 TPELMPLSHVLATKLGAKLTEVRKNGTCPWLRPDGKTQVTVEYYNENGAMVPVRVHTVLISTQHDETVTNDEIAADLKQHVIKPVIPDKYLDDKTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTYGGWXAHGGGAFSGKDPTKVDRSGAYIVRQAAKSIVASGLARRCI 512
            TPELMPL+HVLATKLGAKLTEVRKNGTCPWLRPDGKTQVT+EY NE GAMVP RVHTVLISTQHDETVTND+IAADLK+HVIKPVIP+KYLD+ TIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTYGGW AHGGGAFSGKDPTKVDRSGAYIVRQAAKSIVA+GLARRC+
Sbjct:  134 TPELMPLTHVLATKLGAKLTEVRKNGTCPWLRPDGKTQVTIEYRNEGGAMVPERVHTVLISTQHDETVTNDQIAADLKEHVIKPVIPEKYLDENTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTYGGWGAHGGGAFSGKDPTKVDRSGAYIVRQAAKSIVAAGLARRCL 303
[Close]
BLAST of FC930974 vs. ExPASy Swiss-Prot
Match: METK2_PICSI (S-adenosylmethionine synthetase 2 OS=Picea sitchensis GN=METK2 PE=2 SV=1)

HSP 1 Score: 329.717 bits (844), Expect = 4.716e-90
Identity = 157/170 (92.35%), Postives = 165/170 (97.06%), Query Frame = 3 
Query:    3 TPELMPLSHVLATKLGAKLTEVRKNGTCPWLRPDGKTQVTVEYYNENGAMVPVRVHTVLISTQHDETVTNDEIAADLKQHVIKPVIPDKYLDDKTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTYGGWXAHGGGAFSGKDPTKVDRSGAYIVRQAAKSIVASGLARRCI 512
            TPELMPL+HVLATKLGAKLTEVRKNGTCPWLRPDGKTQVT+EY NE GAMVP RVHTVLISTQHDETVTND+IAADLK+HVIKPVIP+KYLD+ TIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTYGGW AHGGGAFSGKDPTKVDRSGAYIVRQAAKSIVA+GLARRC+
Sbjct:  134 TPELMPLTHVLATKLGAKLTEVRKNGTCPWLRPDGKTQVTIEYRNEGGAMVPERVHTVLISTQHDETVTNDQIAADLKEHVIKPVIPEKYLDENTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTYGGWGAHGGGAFSGKDPTKVDRSGAYIVRQAAKSIVAAGLARRCL 303
[Close]
BLAST of FC930974 vs. ExPASy Swiss-Prot
Match: METK2_SUASA (S-adenosylmethionine synthetase 2 OS=Suaeda salsa GN=METK2 PE=2 SV=1)

HSP 1 Score: 329.331 bits (843), Expect = 6.159e-90
Identity = 158/170 (92.94%), Postives = 166/170 (97.65%), Query Frame = 3 
Query:    3 TPELMPLSHVLATKLGAKLTEVRKNGTCPWLRPDGKTQVTVEYYNENGAMVPVRVHTVLISTQHDETVTNDEIAADLKQHVIKPVIPDKYLDDKTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTYGGWXAHGGGAFSGKDPTKVDRSGAYIVRQAAKSIVASGLARRCI 512
            TPELMPLSHVLATKLGA+LTEVRKNGTC WLRPDGKTQVTVEY N+NGAMVP+RVHTVLISTQHDETVTN++IAADLK+HVIKPVIP+KYLDDKTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTYGGW AHGGGAFSGKDPTKVDRSGAYIVRQAAKSIVA+GLARR I
Sbjct:  134 TPELMPLSHVLATKLGARLTEVRKNGTCAWLRPDGKTQVTVEYNNDNGAMVPIRVHTVLISTQHDETVTNEQIAADLKEHVIKPVIPEKYLDDKTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTYGGWGAHGGGAFSGKDPTKVDRSGAYIVRQAAKSIVANGLARRAI 303
[Close]
BLAST of FC930974 vs. ExPASy Swiss-Prot
Match: METK3_ARATH (S-adenosylmethionine synthetase 3 OS=Arabidopsis thaliana GN=METK3 PE=1 SV=1)

HSP 1 Score: 328.946 bits (842), Expect = 8.044e-90
Identity = 157/170 (92.35%), Postives = 164/170 (96.47%), Query Frame = 3 
Query:    3 TPELMPLSHVLATKLGAKLTEVRKNGTCPWLRPDGKTQVTVEYYNENGAMVPVRVHTVLISTQHDETVTNDEIAADLKQHVIKPVIPDKYLDDKTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTYGGWXAHGGGAFSGKDPTKVDRSGAYIVRQAAKSIVASGLARRCI 512
            TPELMPL+HVLATKLGAKLTEVRKN TCPWLRPDGKTQVTVEY N+ GAM+P+RVHTVLISTQHDETVTNDEIAADLK+HVIKPVIP KYLDD TIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTYGGW AHGGGAFSGKDPTKVDRSGAYIVRQAAKS+VA+GLARRCI
Sbjct:  134 TPELMPLTHVLATKLGAKLTEVRKNKTCPWLRPDGKTQVTVEYKNDGGAMIPIRVHTVLISTQHDETVTNDEIAADLKEHVIKPVIPAKYLDDNTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTYGGWGAHGGGAFSGKDPTKVDRSGAYIVRQAAKSVVAAGLARRCI 303
The following BLAST results are available for this feature:
BLAST of FC930974 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
METK2_BETVU2.117e-9093.53S-adenosylmethionine synthetase 2 OS=Beta vulgaris... [more]
METK2_ARATH2.765e-9091.76S-adenosylmethionine synthetase 2 OS=Arabidopsis t... [more]
METK4_HORVU3.611e-9091.76S-adenosylmethionine synthetase 4 OS=Hordeum vulga... [more]
METK_WHEAT4.716e-9091.18S-adenosylmethionine synthetase OS=Triticum aestiv... [more]
METK_SOLBR4.716e-9092.35S-adenosylmethionine synthetase OS=Solanum brevide... [more]
METK_MUSAC4.716e-9092.35S-adenosylmethionine synthetase OS=Musa acuminata ... [more]
METK2_PINCO4.716e-9092.35S-adenosylmethionine synthetase 2 OS=Pinus contort... [more]
METK2_PICSI4.716e-9092.35S-adenosylmethionine synthetase 2 OS=Picea sitchen... [more]
METK2_SUASA6.159e-9092.94S-adenosylmethionine synthetase 2 OS=Suaeda salsa ... [more]
METK3_ARATH8.044e-9092.35S-adenosylmethionine synthetase 3 OS=Arabidopsis t... [more]

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Properties
Property NameValue
Genbank descriptionC34100A09EF PostHarvP1 Citrus clementina cDNA clone C34100A09, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC930974 ID=FC930974; Name=FC930974; organism=Citrus clementina; type=EST; length=513bp
GGACTCCTGAGTTGATGCCTTTGAGTCATGTGCTTGCAACAAAGCTTGGT
GCTAAGCTTACAGAAGTGAGGAAGAATGGGACCTGTCCGTGGCTGAGGCC
AGATGGCAAAACACAAGTCACTGTTGAGTATTACAATGAGAATGGCGCCA
TGGTTCCTGTTCGTGTCCATACTGTGCTCATCTCAACTCAGCACGATGAG
ACTGTAACTAATGATGAGATTGCTGCAGATCTCAAGCAACATGTGATCAA
GCCTGTGATTCCTGACAAGTACTTGGATGACAAAACTATTTTCCATCTTA
ACCCATCTGGCCGTTTTGTGATTGGTGGCCCTCACGGTGATGCTGGGCTC
ACCGGCCGGAAGATTATTATTGATACTTATGGTGGCTGGNGGGCACACGG
TGGTGGGGCTTTCTCAGGGAAAGATCCTACCAAGGTTGATAGAAGCGGTG
CTTACATTGTAAGGCAAGCTGCTAAGAGTATTGTGGCAAGCGGGCTTGCC
AGGAGATGCATTG
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