FC930974

Overview
NameFC930974
Unique NameFC930974
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length513
Libraries
Library NameType
PostHarvP1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC930974 vs. ExPASy Swiss-Prot
Match: METK_DESDG (S-adenosylmethionine synthetase OS=Desulfovibrio desulfuricans (strain G20) GN=metK PE=3 SV=1)

HSP 1 Score: 181.8 bits (460), Expect = 1.588e-45
Identity = 95/171 (55.56%), Postives = 122/171 (71.35%), Query Frame = 3
Query:    3 TPELMPLSHVLATKLGAKLTEVRKNGTCPWLRPDGKTQVTVEYYNENGAMVPVRVHTVLISTQHDETVTNDEIAADLKQHVIKPVI-PDKYLDDKTI-FHLNPSGRFVIGGPHGDAGLTGRKIIIDTYGGWXAHGGGAFSGKDPTKVDRSGAYIVRQAAKSIVASGLARRC 509
            TP LMP     A +L  KLT VRK+GT  +LRPDGKTQV+ EY +      PVR++ V++STQH E  +  +I   ++ HVI+PV+ P  + ++K     +N +GRFVIGGP GD GLTGRKII DTYGG  +HGGGAFSGKDP+KVDRSGAY+ R  AK++VA+GLA +C
Sbjct:  135 TPTLMPAPIFWAHQLSQKLTAVRKDGTVDFLRPDGKTQVSFEYVDGR----PVRINNVVVSTQHAEQASQTDIIDAIRTHVIRPVLEPSGFFNEKDCEIFINTTGRFVIGGPMGDCGLTGRKIIQDTYGGMGSHGGGAFSGKDPSKVDRSGAYMGRYIAKNVVAAGLAPKC 301          
BLAST of FC930974 vs. ExPASy Swiss-Prot
Match: METK_CORDI (S-adenosylmethionine synthetase OS=Corynebacterium diphtheriae GN=metK PE=3 SV=1)

HSP 1 Score: 181.8 bits (460), Expect = 1.588e-45
Identity = 99/173 (57.23%), Postives = 122/173 (70.52%), Query Frame = 3
Query:    3 TPELMPLSHVLATKLGAKLTEVRKNGTCPWLRPDGKTQVTVEYYNENGAMVPVRVHTVLISTQHDETVTNDEIAADLKQHVIKPVIPDKYLDDKTIFH-----LNPSGRFVIGGPHGDAGLTGRKIIIDTYGGWXAHGGGAFSGKDPTKVDRSGAYIVRQAAKSIVASGLARR 506
            T  LMPL   LA +L  +LT+VRK      LRPDGKTQVT+ Y +E+G   PVR+ TV++STQHD  VT + + A +K+HV+  V+ D  L+           +NPSG FV+GGP GDAGLTGRKII+DTYGG   HGGGAFSGKDP+KVDRSGAY +R  AK+IVA+GLA R
Sbjct:  147 TATLMPLPIDLAHRLARRLTQVRKTSVVSHLRPDGKTQVTLAY-DESGR--PVRLDTVVVSTQHDPDVTQEWLFAQIKEHVVDWVLRDSGLESTLDISGYSLLVNPSGSFVVGGPMGDAGLTGRKIIVDTYGGMARHGGGAFSGKDPSKVDRSGAYAMRWVAKNIVAAGLADR 316          
BLAST of FC930974 vs. ExPASy Swiss-Prot
Match: METK_CHLL2 (S-adenosylmethionine synthetase OS=Chlorobium limicola (strain DSM 245 / NBRC 103803) GN=metK PE=3 SV=1)

HSP 1 Score: 181.8 bits (460), Expect = 1.588e-45
Identity = 98/177 (55.37%), Postives = 121/177 (68.36%), Query Frame = 3
Query:    3 TPELMPLSHVLATKLGAKLTEVRKNGTC-PWLRPDGKTQVTVEYYNENGAMVPVRVHTVLISTQHD-------ETVTNDEIAADLKQHVIKPVIPDKYLDDKTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTYGGWXAHGGGAFSGKDPTKVDRSGAYIVRQAAKSIVASGLARRC 509
            TPELMP +   A +L  KL E+RK G    +LRPD K+QVT+EY ++  A    RV  V++STQHD       E      I  D+ ++V+K VIP + LD+ T FH+NP+GRF IGGPHGD GLTGRKII+DTYGG   HGGGAFSGKDP+KVDRS AY  R  AK+IVA+ LA +C
Sbjct:  138 TPELMPAAIQFAQQLVKKLAEIRKEGKIMTYLRPDAKSQVTLEYIDDKVA----RVDAVVVSTQHDPEPAGMSEADFQAVIRKDIIENVVKVVIPAELLDENTKFHINPTGRFEIGGPHGDTGLTGRKIIVDTYGGAAPHGGGAFSGKDPSKVDRSAAYASRHVAKNIVAADLADKC 310          
BLAST of FC930974 vs. ExPASy Swiss-Prot
Match: METK_BAUCH (S-adenosylmethionine synthetase OS=Baumannia cicadellinicola subsp. Homalodisca coagulata GN=metK PE=3 SV=1)

HSP 1 Score: 181.8 bits (460), Expect = 1.588e-45
Identity = 93/169 (55.03%), Postives = 117/169 (69.23%), Query Frame = 3
Query:    3 TPELMPLSHVLATKLGAKLTEVRKNGTCPWLRPDGKTQVTVEYYNENGAMVPVRVHTVLISTQHDETVTNDEIAADLKQHVIKPVIPDKYLDDKTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTYGGWXAHGGGAFSGKDPTKVDRSGAYIVRQAAKSIVASGLARRC 509
            T  LMP     A +L A+ + VRKNGT PWL PD K+QVT  Y  + G +V +   TV+ STQH E +T   +   + + +IKPV+P + L + T F +NP+GRFV+GGP GD GLTGRKII+DTYGG   HGGGAFSGKDP+KVDRS AY  R  AK+IVA+GLA +C
Sbjct:  131 TDVLMPAPITYAHRLVARQSLVRKNGTLPWLCPDAKSQVTFAY--DEGKVVGI--DTVVFSTQHVENITLPNLKEAVMEEIIKPVLPIELLSEHTKFFINPTGRFVVGGPMGDCGLTGRKIIVDTYGGMARHGGGAFSGKDPSKVDRSAAYAARYVAKNIVAAGLAEKC 295          
BLAST of FC930974 vs. ExPASy Swiss-Prot
Match: METK_AKKM8 (S-adenosylmethionine synthetase OS=Akkermansia muciniphila (strain ATCC BAA-835) GN=metK PE=3 SV=1)

HSP 1 Score: 181.8 bits (460), Expect = 1.588e-45
Identity = 95/169 (56.21%), Postives = 121/169 (71.60%), Query Frame = 3
Query:    3 TPELMPLSHVLATKLGAKLTEVRKNGTCPWLRPDGKTQVTVEYYNENGAMVPVRVHTVLISTQHDETVTNDEIAADLKQHVIKPVIPDKYLDDKTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTYGGWXAHGGGAFSGKDPTKVDRSGAYIVRQAAKSIVASGLARRC 509
            TPEL+P   V A KL  +L   RK G   WLRPD K+QV V Y +E+G   P  +  V+ISTQH E V +D I +   + +IK V+P + LD++T + +NP+G+FV+GGPHGD+GLTGRKII+DTYGG   HGGGAFSGKDP+KVDRS AY+ R  AK IVA+GLA +C
Sbjct:  141 TPELLPAPIVFAHKLLIELARRRKRGHVDWLRPDCKSQVAVAY-DEDGR--PAHIENVVISTQHTEDVDHDTIYSYCVK-LIKNVLPAELLDERTEYFINPTGKFVVGGPHGDSGLTGRKIIVDTYGGMGRHGGGAFSGKDPSKVDRSAAYMCRWVAKHIVAAGLADKC 305          
BLAST of FC930974 vs. ExPASy Swiss-Prot
Match: METK_ACTSZ (S-adenosylmethionine synthetase OS=Actinobacillus succinogenes (strain ATCC 55618 / 130Z) GN=metK PE=3 SV=1)

HSP 1 Score: 181.8 bits (460), Expect = 1.588e-45
Identity = 91/169 (53.85%), Postives = 117/169 (69.23%), Query Frame = 3
Query:    3 TPELMPLSHVLATKLGAKLTEVRKNGTCPWLRPDGKTQVTVEYYNENGAMVPVRVHTVLISTQHDETVTNDEIAADLKQHVIKPVIPDKYLDDKTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTYGGWXAHGGGAFSGKDPTKVDRSGAYIVRQAAKSIVASGLARRC 509
            T   MP     A +L  +  +VRK+GT  WLRPD K+Q+T +Y +       V +  V++STQH E+V+  E+   + + +IKPV+P K+LD  T + +NP+GRFVIGGP GD GLTGRKII+DTYGG   HGGGAFSGKDP+KVDRS AY  R  AK+IVA+GLA RC
Sbjct:  131 TEVFMPAPITYAHRLMERQAKVRKDGTLDWLRPDAKSQLTFKYEDNK----IVGIDAVVLSTQHAESVSQKEVHEGVMEEIIKPVLPAKWLDKDTKYFINPTGRFVIGGPMGDCGLTGRKIIVDTYGGAARHGGGAFSGKDPSKVDRSAAYAARYVAKNIVAAGLADRC 295          
BLAST of FC930974 vs. ExPASy Swiss-Prot
Match: METK_SHELP (S-adenosylmethionine synthetase OS=Shewanella loihica (strain ATCC BAA-1088 / PV-4) GN=metK PE=3 SV=1)

HSP 1 Score: 181.415 bits (459), Expect = 2.074e-45
Identity = 91/169 (53.85%), Postives = 118/169 (69.82%), Query Frame = 3
Query:    3 TPELMPLSHVLATKLGAKLTEVRKNGTCPWLRPDGKTQVTVEYYNENGAMVPVRVHTVLISTQHDETVTNDEIAADLKQHVIKPVIPDKYLDDKTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTYGGWXAHGGGAFSGKDPTKVDRSGAYIVRQAAKSIVASGLARRC 509
            T  LMP     A  L  + +EVRK+ T PWLRPD K+QVT  Y +       V +  V++STQH ++V+  ++   + + +IKPV+P ++L+ +T F +NP+GRFVIGGP GD GLTGRKII+DTYGG   HGGGAFSGKDP+KVDRS AY  R  AK+IVA+GLA RC
Sbjct:  131 TDVLMPAPITYAHALVKRQSEVRKDNTLPWLRPDAKSQVTFAYEDNK----IVGIDAVVLSTQHCDSVSQSDLIEGVMETIIKPVLPAQWLNKETKFFINPTGRFVIGGPMGDCGLTGRKIIVDTYGGMARHGGGAFSGKDPSKVDRSAAYAARYVAKNIVAAGLADRC 295          
BLAST of FC930974 vs. ExPASy Swiss-Prot
Match: METK_RHOCS (S-adenosylmethionine synthetase OS=Rhodospirillum centenum (strain ATCC 51521 / SW) GN=metK PE=3 SV=1)

HSP 1 Score: 181.415 bits (459), Expect = 2.074e-45
Identity = 90/169 (53.25%), Postives = 120/169 (71.01%), Query Frame = 3
Query:    3 TPELMPLSHVLATKLGAKLTEVRKNGTCPWLRPDGKTQVTVEYYNENGAMVPVRVHTVLISTQHDETVTNDEIAADLKQHVIKPVIPDKYLDDKTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTYGGWXAHGGGAFSGKDPTKVDRSGAYIVRQAAKSIVASGLARRC 509
            TP LMP     +  +   L+E R +G   WL PD K+QV+++Y +      PVR  +V++STQH E+V  +EI   +++HV+  V+PD ++  +  F++NP+GRFVIGGP GDAGLTGRKII+DTYGG   HGGGAFSGKDPTKVDRS AY  R  AK++VA+GLAR+C
Sbjct:  133 TPALMPAPLFYSHSILKSLSEARHSGALSWLGPDAKSQVSLQYVDGR----PVRATSVVVSTQHSESVPQEEIREAVRRHVLD-VLPDGWMCPEDTFYVNPTGRFVIGGPDGDAGLTGRKIIVDTYGGAAPHGGGAFSGKDPTKVDRSAAYAARYLAKNVVAAGLARKC 296          
BLAST of FC930974 vs. ExPASy Swiss-Prot
Match: METK_JANMA (S-adenosylmethionine synthetase OS=Janthinobacterium sp. (strain Marseille) GN=metK PE=3 SV=1)

HSP 1 Score: 181.415 bits (459), Expect = 2.074e-45
Identity = 92/168 (54.76%), Postives = 121/168 (72.02%), Query Frame = 3
Query:    3 TPELMPLSHVLATKLGAKLTEVRKNGTCPWLRPDGKTQVTVEYYNENGAMVPVRVHTVLISTQHDETVTNDEIAADLKQHVIKPVIPDKYLDDKTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTYGGWXAHGGGAFSGKDPTKVDRSGAYIVRQAAKSIVASGLARR 506
            TPELMP +   A ++  + +E+RK+G  PWLRPD K+QVT+ Y +      PV + T+++STQH   + + +I   + + +IKPV+P ++L D T F +NP+GRFVIGGP GD GLTGRKII+DTYGG   HGGGAFSGKDP+KVDRS AY  R  AK+IVA+GLA R
Sbjct:  134 TPELMPAAIHYAHRIVERQSELRKDGRLPWLRPDAKSQVTLRYVDGR----PVSIDTIVLSTQHAPEMQHKDIEEAVIESIIKPVVPAEWLKD-TRFLVNPTGRFVIGGPQGDCGLTGRKIIVDTYGGAAPHGGGAFSGKDPSKVDRSAAYAGRYVAKNIVAAGLAER 296          
BLAST of FC930974 vs. ExPASy Swiss-Prot
Match: METK_HERAR (S-adenosylmethionine synthetase OS=Herminiimonas arsenicoxydans GN=metK PE=3 SV=1)

HSP 1 Score: 181.415 bits (459), Expect = 2.074e-45
Identity = 92/168 (54.76%), Postives = 121/168 (72.02%), Query Frame = 3
Query:    3 TPELMPLSHVLATKLGAKLTEVRKNGTCPWLRPDGKTQVTVEYYNENGAMVPVRVHTVLISTQHDETVTNDEIAADLKQHVIKPVIPDKYLDDKTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTYGGWXAHGGGAFSGKDPTKVDRSGAYIVRQAAKSIVASGLARR 506
            TPELMP +   A ++  + +E+RK+G  PWLRPD K+QVT+ Y +      PV + T+++STQH   + + +I   + + +IKPV+P ++L D T F +NP+GRFVIGGP GD GLTGRKII+DTYGG   HGGGAFSGKDP+KVDRS AY  R  AK+IVA+GLA R
Sbjct:  134 TPELMPAAIHYAHRIVERQSELRKDGRLPWLRPDAKSQVTLRYVDGR----PVSIDTIVLSTQHAPEMQHKDIEEAVIESIIKPVVPAEWLKD-TRFLVNPTGRFVIGGPQGDCGLTGRKIIVDTYGGAAPHGGGAFSGKDPSKVDRSAAYAGRYVAKNIVAAGLAER 296          
The following BLAST results are available for this feature:
BLAST of FC930974 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
METK_DESDG1.588e-4555.56S-adenosylmethionine synthetase OS=Desulfovibrio d... [more]
METK_CORDI1.588e-4557.23S-adenosylmethionine synthetase OS=Corynebacterium... [more]
METK_CHLL21.588e-4555.37S-adenosylmethionine synthetase OS=Chlorobium limi... [more]
METK_BAUCH1.588e-4555.03S-adenosylmethionine synthetase OS=Baumannia cicad... [more]
METK_AKKM81.588e-4556.21S-adenosylmethionine synthetase OS=Akkermansia muc... [more]
METK_ACTSZ1.588e-4553.85S-adenosylmethionine synthetase OS=Actinobacillus ... [more]
METK_SHELP2.074e-4553.85S-adenosylmethionine synthetase OS=Shewanella loih... [more]
METK_RHOCS2.074e-4553.25S-adenosylmethionine synthetase OS=Rhodospirillum ... [more]
METK_JANMA2.074e-4554.76S-adenosylmethionine synthetase OS=Janthinobacteri... [more]
METK_HERAR2.074e-4554.76S-adenosylmethionine synthetase OS=Herminiimonas a... [more]

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Properties
Property NameValue
Genbank descriptionC34100A09EF PostHarvP1 Citrus clementina cDNA clone C34100A09, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC930974 ID=FC930974; Name=FC930974; organism=Citrus clementina; type=EST; length=513bp
GGACTCCTGAGTTGATGCCTTTGAGTCATGTGCTTGCAACAAAGCTTGGT
GCTAAGCTTACAGAAGTGAGGAAGAATGGGACCTGTCCGTGGCTGAGGCC
AGATGGCAAAACACAAGTCACTGTTGAGTATTACAATGAGAATGGCGCCA
TGGTTCCTGTTCGTGTCCATACTGTGCTCATCTCAACTCAGCACGATGAG
ACTGTAACTAATGATGAGATTGCTGCAGATCTCAAGCAACATGTGATCAA
GCCTGTGATTCCTGACAAGTACTTGGATGACAAAACTATTTTCCATCTTA
ACCCATCTGGCCGTTTTGTGATTGGTGGCCCTCACGGTGATGCTGGGCTC
ACCGGCCGGAAGATTATTATTGATACTTATGGTGGCTGGNGGGCACACGG
TGGTGGGGCTTTCTCAGGGAAAGATCCTACCAAGGTTGATAGAAGCGGTG
CTTACATTGTAAGGCAAGCTGCTAAGAGTATTGTGGCAAGCGGGCTTGCC
AGGAGATGCATTG
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