FC930974

Overview
NameFC930974
Unique NameFC930974
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length513
Libraries
Library NameType
PostHarvP1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC930974 vs. ExPASy Swiss-Prot
Match: METK_HELHP (S-adenosylmethionine synthetase OS=Helicobacter hepaticus GN=metK PE=3 SV=1)

HSP 1 Score: 181.415 bits (459), Expect = 2.074e-45
Identity = 91/170 (53.53%), Postives = 120/170 (70.59%), Query Frame = 3
Query:    3 TPELMPLSHVLATKLGAKLTEVRKNGTCPWLRPDGKTQVTVEYYNENGAMVPVRVHTVLISTQHDETVTNDEIAADLKQHVIKPVIPDKYLDDKTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTYGGWXAHGGGAFSGKDPTKVDRSGAYIVRQAAKSIVASGLARRCI 512
            TP LMPL   L+ +L   L + RK+GT P+LRPDGK+QVTV Y  E+G   PV + T++ISTQH        +   + + +++ V+P +YL+D   + +NP+G+FVIGGP GDAGLTGRKII+DTYGG   HGGGAFSGKDP+KVDRS AY  R  AK++VASG+  + I
Sbjct:  131 TPSLMPLPIWLSHRLTEGLAKKRKDGTLPFLRPDGKSQVTVRY--EDGK--PVSIDTIVISTQHSPETQQSHLKDAVIEEIVQKVLPQEYLNDNIRYFVNPTGKFVIGGPQGDAGLTGRKIIVDTYGGSCPHGGGAFSGKDPSKVDRSAAYAARYVAKNLVASGVCDKAI 296          
BLAST of FC930974 vs. ExPASy Swiss-Prot
Match: METK_DESMR (S-adenosylmethionine synthetase OS=Desulfovibrio magneticus (strain ATCC 700980 / DSM 13731 / RS-1) GN=metK PE=3 SV=1)

HSP 1 Score: 181.415 bits (459), Expect = 2.074e-45
Identity = 91/169 (53.85%), Postives = 118/169 (69.82%), Query Frame = 3
Query:    3 TPELMPLSHVLATKLGAKLTEVRKNGTCPWLRPDGKTQVTVEYYNENGAMVPVRVHTVLISTQHDETVTNDEIAADLKQHVIKPVIPDKYLDDKTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTYGGWXAHGGGAFSGKDPTKVDRSGAYIVRQAAKSIVASGLARRC 509
            T  LMP     A KL  +LTEVRK+G   +LRPDGKTQV VEY +      PVR+  V++++QH E +++ ++   +K+ VI   +P+  +D  T  ++N +GRFVIGGP GD GLTGRKII DTYGG   HGGGAFSGKDP+KVDRSGAY+ R  AK++VASG  +RC
Sbjct:  135 TETLMPAPIYWAHKLSRRLTEVRKSGVLDFLRPDGKTQVAVEYVDGK----PVRIDNVVVASQHAENISHADLCDAVKKEVIFHTLPESLVDKNTKIYINTTGRFVIGGPMGDCGLTGRKIIQDTYGGMGNHGGGAFSGKDPSKVDRSGAYMARYVAKNMVASGACKRC 299          
BLAST of FC930974 vs. ExPASy Swiss-Prot
Match: METK_BIFAA (S-adenosylmethionine synthetase OS=Bifidobacterium adolescentis (strain ATCC 15703 / DSM 20083) GN=metK PE=3 SV=1)

HSP 1 Score: 181.415 bits (459), Expect = 2.074e-45
Identity = 97/172 (56.40%), Postives = 120/172 (69.77%), Query Frame = 3
Query:    3 TPELMPLSHVLATKLGAKLTEVRKNGTCPWLRPDGKTQVTVEYYNENGAMVPVRVHTVLISTQHDETVTNDEIAADLKQHVIKPVIPDKYLD----DKTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTYGGWXAHGGGAFSGKDPTKVDRSGAYIVRQAAKSIVASGLARR 506
            T  LMPL   LA +L  +L EVRK+G  P LRPDGKTQVT+EY +++    PVR+ TVL+STQHD  V    +   L +HVI+PV+ D   D    D+    +NP+G F++GGP  DAGLTGRKII+DTYGG   HGGGAFSGKDP+KVDRS AY  R  AK+IVA+GLA +
Sbjct:  144 TDVLMPLPIHLAHRLAYRLAEVRKSGEVPHLRPDGKTQVTIEYDDDDH---PVRLDTVLVSTQHDPEVDQAWLKEQLTEHVIRPVLDDVLADRVAHDEYRVLVNPTGSFILGGPAADAGLTGRKIIVDTYGGAAHHGGGAFSGKDPSKVDRSAAYAARWVAKNIVAAGLAHK 312          
BLAST of FC930974 vs. ExPASy Swiss-Prot
Match: METK_XANOR (S-adenosylmethionine synthetase OS=Xanthomonas oryzae pv. oryzae GN=metK PE=3 SV=1)

HSP 1 Score: 181.03 bits (458), Expect = 2.709e-45
Identity = 90/171 (52.63%), Postives = 119/171 (69.59%), Query Frame = 3
Query:    3 TPELMPLSHVLATKLGAKLTEVRK--NGTCPWLRPDGKTQVTVEYYNENGAMVPVRVHTVLISTQHDETVTNDEIAADLKQHVIKPVIPDKYLDDKTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTYGGWXAHGGGAFSGKDPTKVDRSGAYIVRQAAKSIVASGLARRC 509
            T   MP +  L+ +L  +  ++RK  N    WLRPD K+QVT+ Y  E+G  V   +  V++STQHD  V   ++   +++ ++KPV+P K+L   T FH+NP+G+FVIGGP GD GLTGRKII+DTYGGW  HGGGAFSGKDP+KVDRS AY  R  AK++VA+GLA RC
Sbjct:  131 TDSFMPAAIHLSHRLVEQQAKIRKKKNSALSWLRPDAKSQVTLRY--EDG--VATAIDAVVLSTQHDPGVKQKDLIEAVREEILKPVLPAKWLHKGTKFHINPTGKFVIGGPVGDCGLTGRKIIVDTYGGWARHGGGAFSGKDPSKVDRSAAYAARYVAKNVVAAGLADRC 297          
BLAST of FC930974 vs. ExPASy Swiss-Prot
Match: METK_XANOP (S-adenosylmethionine synthetase OS=Xanthomonas oryzae pv. oryzae (strain PXO99A) GN=metK PE=3 SV=1)

HSP 1 Score: 181.03 bits (458), Expect = 2.709e-45
Identity = 90/171 (52.63%), Postives = 119/171 (69.59%), Query Frame = 3
Query:    3 TPELMPLSHVLATKLGAKLTEVRK--NGTCPWLRPDGKTQVTVEYYNENGAMVPVRVHTVLISTQHDETVTNDEIAADLKQHVIKPVIPDKYLDDKTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTYGGWXAHGGGAFSGKDPTKVDRSGAYIVRQAAKSIVASGLARRC 509
            T   MP +  L+ +L  +  ++RK  N    WLRPD K+QVT+ Y  E+G  V   +  V++STQHD  V   ++   +++ ++KPV+P K+L   T FH+NP+G+FVIGGP GD GLTGRKII+DTYGGW  HGGGAFSGKDP+KVDRS AY  R  AK++VA+GLA RC
Sbjct:  131 TDSFMPAAIHLSHRLVEQQAKIRKKKNSALSWLRPDAKSQVTLRY--EDG--VATAIDAVVLSTQHDPGVKQKDLIEAVREEILKPVLPAKWLHKGTKFHINPTGKFVIGGPVGDCGLTGRKIIVDTYGGWARHGGGAFSGKDPSKVDRSAAYAARYVAKNVVAAGLADRC 297          
BLAST of FC930974 vs. ExPASy Swiss-Prot
Match: METK_XANOM (S-adenosylmethionine synthetase OS=Xanthomonas oryzae pv. oryzae (strain MAFF 311018) GN=metK PE=3 SV=1)

HSP 1 Score: 181.03 bits (458), Expect = 2.709e-45
Identity = 90/171 (52.63%), Postives = 119/171 (69.59%), Query Frame = 3
Query:    3 TPELMPLSHVLATKLGAKLTEVRK--NGTCPWLRPDGKTQVTVEYYNENGAMVPVRVHTVLISTQHDETVTNDEIAADLKQHVIKPVIPDKYLDDKTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTYGGWXAHGGGAFSGKDPTKVDRSGAYIVRQAAKSIVASGLARRC 509
            T   MP +  L+ +L  +  ++RK  N    WLRPD K+QVT+ Y  E+G  V   +  V++STQHD  V   ++   +++ ++KPV+P K+L   T FH+NP+G+FVIGGP GD GLTGRKII+DTYGGW  HGGGAFSGKDP+KVDRS AY  R  AK++VA+GLA RC
Sbjct:  131 TDSFMPAAIHLSHRLVEQQAKIRKKKNSALSWLRPDAKSQVTLRY--EDG--VATAIDAVVLSTQHDPGVKQKDLIEAVREEILKPVLPAKWLHKGTKFHINPTGKFVIGGPVGDCGLTGRKIIVDTYGGWARHGGGAFSGKDPSKVDRSAAYAARYVAKNVVAAGLADRC 297          
BLAST of FC930974 vs. ExPASy Swiss-Prot
Match: METK_XANC5 (S-adenosylmethionine synthetase OS=Xanthomonas campestris pv. vesicatoria (strain 85-10) GN=metK PE=3 SV=1)

HSP 1 Score: 181.03 bits (458), Expect = 2.709e-45
Identity = 90/171 (52.63%), Postives = 119/171 (69.59%), Query Frame = 3
Query:    3 TPELMPLSHVLATKLGAKLTEVRK--NGTCPWLRPDGKTQVTVEYYNENGAMVPVRVHTVLISTQHDETVTNDEIAADLKQHVIKPVIPDKYLDDKTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTYGGWXAHGGGAFSGKDPTKVDRSGAYIVRQAAKSIVASGLARRC 509
            T   MP +  L+ +L  +  ++RK  N    WLRPD K+QVT+ Y  E+G  V   +  V++STQHD  V   ++   +++ ++KPV+P K+L   T FH+NP+G+FVIGGP GD GLTGRKII+DTYGGW  HGGGAFSGKDP+KVDRS AY  R  AK++VA+GLA RC
Sbjct:  131 TDSFMPAAIHLSHRLVEQQAKIRKKKNSALSWLRPDAKSQVTLRY--EDG--VATAIDAVVLSTQHDPGVKQKDLIEAVREEILKPVLPAKWLHKGTKFHINPTGKFVIGGPVGDCGLTGRKIIVDTYGGWARHGGGAFSGKDPSKVDRSAAYAARYVAKNVVAAGLADRC 297          
BLAST of FC930974 vs. ExPASy Swiss-Prot
Match: METK_XANAC (S-adenosylmethionine synthetase OS=Xanthomonas axonopodis pv. citri GN=metK PE=3 SV=1)

HSP 1 Score: 181.03 bits (458), Expect = 2.709e-45
Identity = 90/171 (52.63%), Postives = 119/171 (69.59%), Query Frame = 3
Query:    3 TPELMPLSHVLATKLGAKLTEVRK--NGTCPWLRPDGKTQVTVEYYNENGAMVPVRVHTVLISTQHDETVTNDEIAADLKQHVIKPVIPDKYLDDKTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTYGGWXAHGGGAFSGKDPTKVDRSGAYIVRQAAKSIVASGLARRC 509
            T   MP +  L+ +L  +  ++RK  N    WLRPD K+QVT+ Y  E+G  V   +  V++STQHD  V   ++   +++ ++KPV+P K+L   T FH+NP+G+FVIGGP GD GLTGRKII+DTYGGW  HGGGAFSGKDP+KVDRS AY  R  AK++VA+GLA RC
Sbjct:  131 TDSFMPAAIHLSHRLVEQQAKIRKKKNSALSWLRPDAKSQVTLRY--EDG--VATAIDAVVLSTQHDPGVKQKDLIEAVREEILKPVLPAKWLHKGTKFHINPTGKFVIGGPVGDCGLTGRKIIVDTYGGWARHGGGAFSGKDPSKVDRSAAYAARYVAKNVVAAGLADRC 297          
BLAST of FC930974 vs. ExPASy Swiss-Prot
Match: METK_PSYCK (S-adenosylmethionine synthetase OS=Psychrobacter cryohalolentis (strain K5) GN=metK PE=3 SV=1)

HSP 1 Score: 181.03 bits (458), Expect = 2.709e-45
Identity = 89/169 (52.66%), Postives = 118/169 (69.82%), Query Frame = 3
Query:    3 TPELMPLSHVLATKLGAKLTEVRKNGTCPWLRPDGKTQVTVEYYNENGAMVPVRVHTVLISTQHDETVTNDEIAADLKQHVIKPVIPDKYLDDKTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTYGGWXAHGGGAFSGKDPTKVDRSGAYIVRQAAKSIVASGLARRC 509
            T  LMP     A +L  + +E+R+ G  PWLRPD K QVT++Y        PV +  V++STQHD +++  ++   + + +IK V+P + L   T +H+NP+G+FVIGGP GDAGLTGRKII+DTYGG   HGGGAFSGKDP+KVDRS AY VR  AK+IVA+G+A RC
Sbjct:  132 TEVLMPAPIEYAHRLMERQSELRRAGELPWLRPDAKAQVTLKYDGNK----PVAIDAVVLSTQHDPSISQADLQEAIMESIIKQVLPAELLHAGTRYHINPTGKFVIGGPVGDAGLTGRKIIVDTYGGMARHGGGAFSGKDPSKVDRSAAYAVRYVAKNIVAAGIADRC 296          
BLAST of FC930974 vs. ExPASy Swiss-Prot
Match: METK_MAGSM (S-adenosylmethionine synthetase OS=Magnetococcus sp. (strain MC-1) GN=metK PE=3 SV=1)

HSP 1 Score: 181.03 bits (458), Expect = 2.709e-45
Identity = 92/169 (54.44%), Postives = 119/169 (70.41%), Query Frame = 3
Query:    3 TPELMPLSHVLATKLGAKLTEVRKNGTCPWLRPDGKTQVTVEYYNENGAMVPVRVHTVLISTQHDETVTNDEIAADLKQHVIKPVIPDKYLDDKTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTYGGWXAHGGGAFSGKDPTKVDRSGAYIVRQAAKSIVASGLARRC 509
            T  LMP+    A +L  K  E+RK+G   W RPD K+QVTV Y ++     PV V  V+IS+QH   V +D I  ++ + VI+ VIP + L + T + +NP+GRFVIGGP GDAG+TGRKII+DTYGG  +HGGGAFSGKDP+KVDRS AY+ R  AK+IVA+GLA +C
Sbjct:  135 TDVLMPMPIYYAHRLMEKHAELRKSGELAWARPDAKSQVTVRYVDDK----PVSVEAVVISSQHSPDVDHDTIEKEIIEKVIRAVIPAELLHEGTQYFINPTGRFVIGGPVGDAGVTGRKIIVDTYGGMGSHGGGAFSGKDPSKVDRSSAYMGRYVAKNIVAAGLAEKC 299          
The following BLAST results are available for this feature:
BLAST of FC930974 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
METK_HELHP2.074e-4553.53S-adenosylmethionine synthetase OS=Helicobacter he... [more]
METK_DESMR2.074e-4553.85S-adenosylmethionine synthetase OS=Desulfovibrio m... [more]
METK_BIFAA2.074e-4556.40S-adenosylmethionine synthetase OS=Bifidobacterium... [more]
METK_XANOR2.709e-4552.63S-adenosylmethionine synthetase OS=Xanthomonas ory... [more]
METK_XANOP2.709e-4552.63S-adenosylmethionine synthetase OS=Xanthomonas ory... [more]
METK_XANOM2.709e-4552.63S-adenosylmethionine synthetase OS=Xanthomonas ory... [more]
METK_XANC52.709e-4552.63S-adenosylmethionine synthetase OS=Xanthomonas cam... [more]
METK_XANAC2.709e-4552.63S-adenosylmethionine synthetase OS=Xanthomonas axo... [more]
METK_PSYCK2.709e-4552.66S-adenosylmethionine synthetase OS=Psychrobacter c... [more]
METK_MAGSM2.709e-4554.44S-adenosylmethionine synthetase OS=Magnetococcus s... [more]

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Properties
Property NameValue
Genbank descriptionC34100A09EF PostHarvP1 Citrus clementina cDNA clone C34100A09, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC930974 ID=FC930974; Name=FC930974; organism=Citrus clementina; type=EST; length=513bp
GGACTCCTGAGTTGATGCCTTTGAGTCATGTGCTTGCAACAAAGCTTGGT
GCTAAGCTTACAGAAGTGAGGAAGAATGGGACCTGTCCGTGGCTGAGGCC
AGATGGCAAAACACAAGTCACTGTTGAGTATTACAATGAGAATGGCGCCA
TGGTTCCTGTTCGTGTCCATACTGTGCTCATCTCAACTCAGCACGATGAG
ACTGTAACTAATGATGAGATTGCTGCAGATCTCAAGCAACATGTGATCAA
GCCTGTGATTCCTGACAAGTACTTGGATGACAAAACTATTTTCCATCTTA
ACCCATCTGGCCGTTTTGTGATTGGTGGCCCTCACGGTGATGCTGGGCTC
ACCGGCCGGAAGATTATTATTGATACTTATGGTGGCTGGNGGGCACACGG
TGGTGGGGCTTTCTCAGGGAAAGATCCTACCAAGGTTGATAGAAGCGGTG
CTTACATTGTAAGGCAAGCTGCTAAGAGTATTGTGGCAAGCGGGCTTGCC
AGGAGATGCATTG
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