FC930974

Overview
NameFC930974
Unique NameFC930974
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length513
Libraries
Library NameType
PostHarvP1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of FC930974 vs. ExPASy Swiss-Prot
Match: METK3_BRAJU (S-adenosylmethionine synthetase 3 OS=Brassica juncea GN=MSAMS3 PE=2 SV=1)

HSP 1 Score: 327.02 bits (837), Expect = 3.057e-89
Identity = 155/170 (91.18%), Postives = 165/170 (97.06%), Query Frame = 3 
Query:    3 TPELMPLSHVLATKLGAKLTEVRKNGTCPWLRPDGKTQVTVEYYNENGAMVPVRVHTVLISTQHDETVTNDEIAADLKQHVIKPVIPDKYLDDKTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTYGGWXAHGGGAFSGKDPTKVDRSGAYIVRQAAKSIVASGLARRCI 512
            TPELMPLSHVLATK+GAKLTEVRKNGTC WLRP+GKTQVT EYYN+NGAMVPVRVHTVLISTQHDETVTNDEIA DLK+HVIKP+IP+KYLDDKTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTYGGW AHGGGAFSGKDPTKVDRSGAYIVRQAAKS+VA+G+ARR +
Sbjct:  134 TPELMPLSHVLATKIGAKLTEVRKNGTCRWLRPNGKTQVTGEYYNDNGAMVPVRVHTVLISTQHDETVTNDEIARDLKEHVIKPIIPEKYLDDKTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTYGGWGAHGGGAFSGKDPTKVDRSGAYIVRQAAKSVVANGMARRAL 303
[Close]
BLAST of FC930974 vs. ExPASy Swiss-Prot
Match: METK2_HORVU (S-adenosylmethionine synthetase 2 OS=Hordeum vulgare GN=SAM2 PE=2 SV=1)

HSP 1 Score: 327.02 bits (837), Expect = 3.057e-89
Identity = 156/170 (91.76%), Postives = 163/170 (95.88%), Query Frame = 3 
Query:    3 TPELMPLSHVLATKLGAKLTEVRKNGTCPWLRPDGKTQVTVEYYNENGAMVPVRVHTVLISTQHDETVTNDEIAADLKQHVIKPVIPDKYLDDKTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTYGGWXAHGGGAFSGKDPTKVDRSGAYIVRQAAKSIVASGLARRCI 512
            TPELMPL+H+LATKLGA+LTEVRKNGTC WLRPDGKTQVT+EY NE GAMVPVRVHTVLISTQHDETVTNDEIAADLK+HVIKPVIP KYLD+ TIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTYGGW AHGGGAFSGKDPTKVDRSGAYI RQAAKSI+ASGLARRCI
Sbjct:  136 TPELMPLTHMLATKLGARLTEVRKNGTCAWLRPDGKTQVTIEYLNEGGAMVPVRVHTVLISTQHDETVTNDEIAADLKEHVIKPVIPGKYLDENTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTYGGWGAHGGGAFSGKDPTKVDRSGAYIARQAAKSIIASGLARRCI 305
[Close]
BLAST of FC930974 vs. ExPASy Swiss-Prot
Match: METK4_POPTR (S-adenosylmethionine synthetase 4 OS=Populus trichocarpa GN=METK4 PE=2 SV=1)

HSP 1 Score: 326.635 bits (836), Expect = 3.992e-89
Identity = 156/170 (91.76%), Postives = 164/170 (96.47%), Query Frame = 3 
Query:    3 TPELMPLSHVLATKLGAKLTEVRKNGTCPWLRPDGKTQVTVEYYNENGAMVPVRVHTVLISTQHDETVTNDEIAADLKQHVIKPVIPDKYLDDKTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTYGGWXAHGGGAFSGKDPTKVDRSGAYIVRQAAKSIVASGLARRCI 512
            TPELMPL+HVLATKLGAKLTEVRKN TCPWLRPDGKTQVTVEY NE GAMVP+RVHT+LISTQHDE VTN++IAADLK+HVIKPVIP +YLDDKTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTYGGW AHGGGAFSGKDPTKVDRSGAYIVRQAAKS+VASGLARRCI
Sbjct:  134 TPELMPLTHVLATKLGAKLTEVRKNKTCPWLRPDGKTQVTVEYKNEGGAMVPIRVHTILISTQHDENVTNEQIAADLKEHVIKPVIPVQYLDDKTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTYGGWGAHGGGAFSGKDPTKVDRSGAYIVRQAAKSVVASGLARRCI 303
[Close]
BLAST of FC930974 vs. ExPASy Swiss-Prot
Match: METK3_PICSI (S-adenosylmethionine synthetase 3 OS=Picea sitchensis GN=METK3 PE=2 SV=1)

HSP 1 Score: 326.635 bits (836), Expect = 3.992e-89
Identity = 156/170 (91.76%), Postives = 164/170 (96.47%), Query Frame = 3 
Query:    3 TPELMPLSHVLATKLGAKLTEVRKNGTCPWLRPDGKTQVTVEYYNENGAMVPVRVHTVLISTQHDETVTNDEIAADLKQHVIKPVIPDKYLDDKTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTYGGWXAHGGGAFSGKDPTKVDRSGAYIVRQAAKSIVASGLARRCI 512
            TPELMPL+HVLATKLGAKLTEVRKNGTC WLRPDGKTQVT+EY N+ GAMVP RVHTVLISTQHDETVTND+IAADLKQHVIKPVIP+KYLD+ TIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTYGGW AHGGGAFSGKDPTKVDRSGAYIVRQAAKSIVA+GLARRC+
Sbjct:  134 TPELMPLTHVLATKLGAKLTEVRKNGTCAWLRPDGKTQVTIEYRNDGGAMVPERVHTVLISTQHDETVTNDQIAADLKQHVIKPVIPEKYLDENTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTYGGWGAHGGGAFSGKDPTKVDRSGAYIVRQAAKSIVAAGLARRCL 303
[Close]
BLAST of FC930974 vs. ExPASy Swiss-Prot
Match: METK1_PICSI (S-adenosylmethionine synthetase 1 OS=Picea sitchensis GN=METK1 PE=2 SV=1)

HSP 1 Score: 326.25 bits (835), Expect = 5.214e-89
Identity = 154/170 (90.59%), Postives = 165/170 (97.06%), Query Frame = 3 
Query:    3 TPELMPLSHVLATKLGAKLTEVRKNGTCPWLRPDGKTQVTVEYYNENGAMVPVRVHTVLISTQHDETVTNDEIAADLKQHVIKPVIPDKYLDDKTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTYGGWXAHGGGAFSGKDPTKVDRSGAYIVRQAAKSIVASGLARRCI 512
            TPELMPL+HVLATKLGA+LTEVRK+GTCPWLRPDGKTQVTVEY NE GAMVP+RVHTVLISTQHDETVTNDEIAADLK+HVIKPV+P +YLD+ TIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTYGGW AHGGGAFSGKDPTKVDRSGAYIVRQAAKS+VA+GLARRC+
Sbjct:  134 TPELMPLTHVLATKLGARLTEVRKDGTCPWLRPDGKTQVTVEYKNEGGAMVPLRVHTVLISTQHDETVTNDEIAADLKEHVIKPVVPSQYLDENTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTYGGWGAHGGGAFSGKDPTKVDRSGAYIVRQAAKSVVAAGLARRCL 303
[Close]
BLAST of FC930974 vs. ExPASy Swiss-Prot
Match: METK1_ACTCH (S-adenosylmethionine synthetase 1 OS=Actinidia chinensis GN=SAM1 PE=2 SV=1)

HSP 1 Score: 325.865 bits (834), Expect = 6.810e-89
Identity = 155/170 (91.18%), Postives = 163/170 (95.88%), Query Frame = 3 
Query:    3 TPELMPLSHVLATKLGAKLTEVRKNGTCPWLRPDGKTQVTVEYYNENGAMVPVRVHTVLISTQHDETVTNDEIAADLKQHVIKPVIPDKYLDDKTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTYGGWXAHGGGAFSGKDPTKVDRSGAYIVRQAAKSIVASGLARRCI 512
            TPELMPL+HVLATKLGAKLTEVRKN TCPWLRPDGKTQVTVEY NE GAMVP+RVHTVLISTQHDETVTND+IA DLK+HVIKPV+P +YLDD TIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTYGGW AHGGGAFSGKDPTKVDRSGAYIVRQAAKS+VASGLARRC+
Sbjct:  134 TPELMPLTHVLATKLGAKLTEVRKNSTCPWLRPDGKTQVTVEYRNEGGAMVPIRVHTVLISTQHDETVTNDQIANDLKKHVIKPVVPAQYLDDNTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTYGGWGAHGGGAFSGKDPTKVDRSGAYIVRQAAKSVVASGLARRCL 303
[Close]
BLAST of FC930974 vs. ExPASy Swiss-Prot
Match: METK3_VITVI (S-adenosylmethionine synthetase 3 OS=Vitis vinifera GN=METK3 PE=3 SV=1)

HSP 1 Score: 325.479 bits (833), Expect = 8.894e-89
Identity = 154/170 (90.59%), Postives = 164/170 (96.47%), Query Frame = 3 
Query:    3 TPELMPLSHVLATKLGAKLTEVRKNGTCPWLRPDGKTQVTVEYYNENGAMVPVRVHTVLISTQHDETVTNDEIAADLKQHVIKPVIPDKYLDDKTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTYGGWXAHGGGAFSGKDPTKVDRSGAYIVRQAAKSIVASGLARRCI 512
            TPELMPL+HVLATKLGAKLTEVRKN TCPWLRPDGKTQVTVEY NE GAMVP+RVHTVLISTQHDETVTND+IA +L++HVIKPVIP K++DDKTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTYGGW AHGGGAFSGKDPTKVDRSGAYIVRQAAKS+VASGLARRC+
Sbjct:  134 TPELMPLTHVLATKLGAKLTEVRKNKTCPWLRPDGKTQVTVEYRNEGGAMVPIRVHTVLISTQHDETVTNDQIAKELREHVIKPVIPSKFMDDKTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTYGGWGAHGGGAFSGKDPTKVDRSGAYIVRQAAKSVVASGLARRCL 303
[Close]
BLAST of FC930974 vs. ExPASy Swiss-Prot
Match: METK1_BRAJU (S-adenosylmethionine synthetase 1 OS=Brassica juncea GN=SAMS1 PE=2 SV=1)

HSP 1 Score: 325.479 bits (833), Expect = 8.894e-89
Identity = 154/170 (90.59%), Postives = 165/170 (97.06%), Query Frame = 3 
Query:    3 TPELMPLSHVLATKLGAKLTEVRKNGTCPWLRPDGKTQVTVEYYNENGAMVPVRVHTVLISTQHDETVTNDEIAADLKQHVIKPVIPDKYLDDKTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTYGGWXAHGGGAFSGKDPTKVDRSGAYIVRQAAKSIVASGLARRCI 512
            TPELMPLSHVLATK+GAKLTEVRKNGTC WLRPDGKTQVTVEYYN+NGAMVPVRVHTVLISTQHDETVTN+EIA DLK+HVIKP+IP+KYLDDKTIFHLNPSGRFVIGGP GDAGLTGRKIIIDTYGGW AHGGGAFSGKDPTKVDRSGAYIVRQ+AKS+VA+G+ARR +
Sbjct:  134 TPELMPLSHVLATKIGAKLTEVRKNGTCRWLRPDGKTQVTVEYYNDNGAMVPVRVHTVLISTQHDETVTNEEIARDLKEHVIKPIIPEKYLDDKTIFHLNPSGRFVIGGPDGDAGLTGRKIIIDTYGGWGAHGGGAFSGKDPTKVDRSGAYIVRQSAKSVVANGMARRAL 303
[Close]
BLAST of FC930974 vs. ExPASy Swiss-Prot
Match: METK3_CATRO (S-adenosylmethionine synthetase 3 OS=Catharanthus roseus GN=SAMS3 PE=1 SV=1)

HSP 1 Score: 325.094 bits (832), Expect = 1.162e-88
Identity = 155/170 (91.18%), Postives = 164/170 (96.47%), Query Frame = 3 
Query:    3 TPELMPLSHVLATKLGAKLTEVRKNGTCPWLRPDGKTQVTVEYYNENGAMVPVRVHTVLISTQHDETVTNDEIAADLKQHVIKPVIPDKYLDDKTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTYGGWXAHGGGAFSGKDPTKVDRSGAYIVRQAAKSIVASGLARRCI 512
            TPELMPL+HVLATKLGAKLTEVRKN TCPWLRPDGKTQVTVEY NE GAMVP+RVHTVLISTQHDETVTN++IA DLK+HVIKPVIP +YLDD+TIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTYGGW AHGGGAFSGKDPTKVDRSGAYIVRQAAKS+VASGLARRC+
Sbjct:  134 TPELMPLTHVLATKLGAKLTEVRKNKTCPWLRPDGKTQVTVEYRNEGGAMVPIRVHTVLISTQHDETVTNEQIAQDLKEHVIKPVIPAQYLDDQTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTYGGWGAHGGGAFSGKDPTKVDRSGAYIVRQAAKSVVASGLARRCL 303
[Close]
BLAST of FC930974 vs. ExPASy Swiss-Prot
Match: METK2_ACTCH (S-adenosylmethionine synthetase 2 OS=Actinidia chinensis GN=SAM2 PE=2 SV=1)

HSP 1 Score: 325.094 bits (832), Expect = 1.162e-88
Identity = 155/170 (91.18%), Postives = 163/170 (95.88%), Query Frame = 3 
Query:    3 TPELMPLSHVLATKLGAKLTEVRKNGTCPWLRPDGKTQVTVEYYNENGAMVPVRVHTVLISTQHDETVTNDEIAADLKQHVIKPVIPDKYLDDKTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTYGGWXAHGGGAFSGKDPTKVDRSGAYIVRQAAKSIVASGLARRCI 512
            TPELMPL+HVLATKLGAKLTEVRKN TCPWLRPDGKTQVTVEY NE GAMVPVRVHTVLISTQHDETVTN++IA DLK+HVIKPVIP +Y+DD TIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTYGGW AHGGGAFSGKDPTKVDRSGAY+VRQAAKS+VASGLARRCI
Sbjct:  134 TPELMPLTHVLATKLGAKLTEVRKNNTCPWLRPDGKTQVTVEYRNEGGAMVPVRVHTVLISTQHDETVTNEQIAKDLKEHVIKPVIPAQYMDDDTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTYGGWGAHGGGAFSGKDPTKVDRSGAYVVRQAAKSVVASGLARRCI 303
The following BLAST results are available for this feature:
BLAST of FC930974 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
METK3_BRAJU3.057e-8991.18S-adenosylmethionine synthetase 3 OS=Brassica junc... [more]
METK2_HORVU3.057e-8991.76S-adenosylmethionine synthetase 2 OS=Hordeum vulga... [more]
METK4_POPTR3.992e-8991.76S-adenosylmethionine synthetase 4 OS=Populus trich... [more]
METK3_PICSI3.992e-8991.76S-adenosylmethionine synthetase 3 OS=Picea sitchen... [more]
METK1_PICSI5.214e-8990.59S-adenosylmethionine synthetase 1 OS=Picea sitchen... [more]
METK1_ACTCH6.810e-8991.18S-adenosylmethionine synthetase 1 OS=Actinidia chi... [more]
METK3_VITVI8.894e-8990.59S-adenosylmethionine synthetase 3 OS=Vitis vinifer... [more]
METK1_BRAJU8.894e-8990.59S-adenosylmethionine synthetase 1 OS=Brassica junc... [more]
METK3_CATRO1.162e-8891.18S-adenosylmethionine synthetase 3 OS=Catharanthus ... [more]
METK2_ACTCH1.162e-8891.18S-adenosylmethionine synthetase 2 OS=Actinidia chi... [more]

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Properties
Property NameValue
Genbank descriptionC34100A09EF PostHarvP1 Citrus clementina cDNA clone C34100A09, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC930974 ID=FC930974; Name=FC930974; organism=Citrus clementina; type=EST; length=513bp
GGACTCCTGAGTTGATGCCTTTGAGTCATGTGCTTGCAACAAAGCTTGGT
GCTAAGCTTACAGAAGTGAGGAAGAATGGGACCTGTCCGTGGCTGAGGCC
AGATGGCAAAACACAAGTCACTGTTGAGTATTACAATGAGAATGGCGCCA
TGGTTCCTGTTCGTGTCCATACTGTGCTCATCTCAACTCAGCACGATGAG
ACTGTAACTAATGATGAGATTGCTGCAGATCTCAAGCAACATGTGATCAA
GCCTGTGATTCCTGACAAGTACTTGGATGACAAAACTATTTTCCATCTTA
ACCCATCTGGCCGTTTTGTGATTGGTGGCCCTCACGGTGATGCTGGGCTC
ACCGGCCGGAAGATTATTATTGATACTTATGGTGGCTGGNGGGCACACGG
TGGTGGGGCTTTCTCAGGGAAAGATCCTACCAAGGTTGATAGAAGCGGTG
CTTACATTGTAAGGCAAGCTGCTAAGAGTATTGTGGCAAGCGGGCTTGCC
AGGAGATGCATTG
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