FC930975

Overview
NameFC930975
Unique NameFC930975
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length671
Libraries
Library NameType
PostHarvP1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC930975 vs. ExPASy Swiss-Prot
Match: ALDR_RABIT (Aldose reductase OS=Oryctolagus cuniculus GN=AKR1B1 PE=2 SV=3)

HSP 1 Score: 153.295 bits (386), Expect = 1.073e-36
Identity = 89/211 (42.18%), Postives = 117/211 (55.45%), Query Frame = 2
Query:   53 ITLNNGFKMPIIGLGVWRMDESNIRDLIINAIKIGYRHIDCAADYRNEAEVGEALAEAFSTGLVKREDLFITTKLWNSDHGH--VLEACKDSXXXXXXXXXXXXXVHFPVATKHTGVGTTDSALDADG-VLEIDTTISLETTWHAMEDLVSMGLVRSIGISNYDIFLTRDCLAYS--KVKPVVNQFETHPYFQRDSLVKFCQKHGICVTAH 670
            + L NG KMPI+GLG W+     + + +  AI +GYRHIDCA  Y+NE EVG AL E     +VKRE+LFI +KLW + H    V  AC+ +             +H+P   KH   G+    LDA G V+  DT      TW AME LV  GLV+SIG+SN++       L     K KP VNQ E HPY  ++ L+++C   GI VTA+
Sbjct:    5 LVLYNGAKMPILGLGTWKSPPGQVTEAVKTAIDLGYRHIDCAHVYQNENEVGVALQEKLKEQVVKREELFIVSKLWCTSHDKSLVKGACQKTLNDLKLDYLDLYLIHWPTGFKH---GSEYFPLDAAGNVIPSDT--DFLDTWEAMEGLVDEGLVKSIGVSNFNHLQIERILNKPGLKYKPAVNQIECHPYLTQEKLIQYCHSKGIVVTAY 210          
BLAST of FC930975 vs. ExPASy Swiss-Prot
Match: ALDR_HUMAN (Aldose reductase OS=Homo sapiens GN=AKR1B1 PE=1 SV=3)

HSP 1 Score: 153.295 bits (386), Expect = 1.073e-36
Identity = 91/214 (42.52%), Postives = 122/214 (57.01%), Query Frame = 2
Query:   53 ITLNNGFKMPIIGLGVWRMDESNIRDLIINAIKIGYRHIDCAADYRNEAEVGEALAEAFSTGLVKREDLFITTKLWNSDH--GHVLEACKDSXXXXXXXXXXXXXVHFPVATKHTGVGTTDSALDADG-VLEIDTTISLETTWHAMEDLVSMGLVRSIGISNY-----DIFLTRDCLAYSKVKPVVNQFETHPYFQRDSLVKFCQKHGICVTAH 670
            + LNNG KMPI+GLG W+     + + +  AI +GYRHIDCA  Y+NE EVG A+ E     +VKRE+LFI +KLW + H  G V  AC+ +             +H+P   K    G     LD  G V+  DT I    TW AME+LV  GLV++IGISN+     ++ L +  L Y   KP VNQ E HPY  ++ L+++CQ  GI VTA+
Sbjct:    5 LLLNNGAKMPILGLGTWKSPPGQVTEAVKVAIDVGYRHIDCAHVYQNENEVGVAIQEKLREQVVKREELFIVSKLWCTYHEKGLVKGACQKTLSDLKLDYLDLYLIHWPTGFK---PGKEFFPLDESGNVVPSDTNIL--DTWAAMEELVDEGLVKAIGISNFNHLQVEMILNKPGLKY---KPAVNQIECHPYLTQEKLIQYCQSKGIVVTAY 210          
BLAST of FC930975 vs. ExPASy Swiss-Prot
Match: AK1A1_BOVIN (Alcohol dehydrogenase [NADP+] OS=Bos taurus GN=AKR1A1 PE=2 SV=1)

HSP 1 Score: 153.295 bits (386), Expect = 1.073e-36
Identity = 85/209 (40.67%), Postives = 122/209 (58.37%), Query Frame = 2
Query:   53 ITLNNGFKMPIIGLGVWRMDESNIRDLIINAIKIGYRHIDCAADYRNEAEVGEALAEAFSTG-LVKREDLFITTKLWNSDH--GHVLEACKDSXXXXXXXXXXXXXVHFPVATKHTGVGTTDSALDADGVLEIDTTISLETTWHAMEDLVSMGLVRSIGISNYDIFLTRDCLAYSKVKPVVNQFETHPYFQRDSLVKFCQKHGICVTAH 670
            I L+ G KMP+IGLG W+ D   ++  I  A+ +GYRHIDCAA Y NE E+GEAL E    G LV RE+LF+T+KLWN+ H    V  A + +             +H+P A +    G +    +ADG +  D+T   + TW A+E LV+ GLVR++G+SN++     D L+ + V+P V Q E HPY  ++ L+  CQ   + VTA+
Sbjct:    6 ILLHTGQKMPLIGLGTWKSDPGQVKAAIKYALSVGYRHIDCAAIYGNETEIGEALKENVGPGKLVPREELFVTSKLWNTKHHPEDVEPALRKTLADLQLEYLDLYLMHWPYAFER---GDSPFPKNADGTIRYDST-HYKETWRALEALVAKGLVRALGLSNFNSRQIDDVLSVASVRPAVLQVECHPYLAQNELIAHCQARNLEVTAY 210          
BLAST of FC930975 vs. ExPASy Swiss-Prot
Match: AK1A1_CHICK (Alcohol dehydrogenase [NADP+] OS=Gallus gallus GN=AKR1A1 PE=2 SV=1)

HSP 1 Score: 152.91 bits (385), Expect = 1.401e-36
Identity = 81/209 (38.76%), Postives = 120/209 (57.42%), Query Frame = 2
Query:   53 ITLNNGFKMPIIGLGVWRMDESNIRDLIINAIKIGYRHIDCAADYRNEAEVGEALAEAFSTG-LVKREDLFITTKLWNSDH--GHVLEACKDSXXXXXXXXXXXXXVHFPVATKHTGVGTTDSALDADGVLEIDTTISLETTWHAMEDLVSMGLVRSIGISNYDIFLTRDCLAYSKVKPVVNQFETHPYFQRDSLVKFCQKHGICVTAH 670
            + L NG K+P+IGLG W+ +   +++ +  A+ +GYRH+DCAA Y NEAE+G+A  E      ++KREDLF+T+KLWN+ H    V  A + +             +H+P A +    G      + DG +  D T   + TW AME LV  GL ++IG+SN++     D L+ + VKP V Q E HPY  ++ L+  CQK G+ VTA+
Sbjct:    8 VALYNGQKIPLIGLGTWKSEPGQVKEAVKYALSVGYRHVDCAAAYSNEAEIGDAFQECVGPNKVIKREDLFVTSKLWNTKHHPEDVEPALRKTLADLKLDYLDLYLMHWPHAFER---GDNLFPKNPDGTMRYDYT-DYKDTWKAMEKLVEKGLAKAIGLSNFNSRQIDDVLSVATVKPAVLQVECHPYLAQNELIAHCQKRGLVVTAY 212          
BLAST of FC930975 vs. ExPASy Swiss-Prot
Match: XYL1_KLULA (NAD(P)H-dependent D-xylose reductase OS=Kluyveromyces lactis GN=XYL1 PE=3 SV=1)

HSP 1 Score: 152.14 bits (383), Expect = 2.390e-36
Identity = 87/215 (40.47%), Postives = 119/215 (55.35%), Query Frame = 2
Query:   53 ITLNNGFKMPIIGLGVWRMDESNIRDLIINAIKIGYRHIDCAADYRNEAEVGEALAEAFSTGLVKREDLFITTKLWNSDH--GHVLEACKDSXXXXXXXXXXXXXVHFPVATKHTGVGT-------TDSALDADGVLEIDTTISLETTWHAMEDLVSMGLVRSIGISNYDIFLTRDCLAYSKVKPVVNQFETHPYFQRDSLVKFCQKHGICVTAH 670
            +TLNNG KMP++GLG W+M      D I  AIKIGYR  D A DY NE EVG+ +  A   GLVKREDL + +KLWNS H   +V  A + +             +HFP+A K             T    +A G +E +  + L  TW A+E LV  G ++S+GISN+   L +D L  +++KPV  Q E HPY  ++ L+K+ +  GI V A+
Sbjct:    8 VTLNNGEKMPLVGLGCWKMPNDVCADQIYEAIKIGYRLFDGAQDYANEKEVGQGVNRAIKEGLVKREDLVVVSKLWNSFHHPDNVPRALERTLSDLQLDYVDIFYIHFPLAFKPVPFDEKYPPGFYTGKEDEAKGHIE-EEQVPLLDTWRALEKLVDQGKIKSLGISNFSGALIQDLLRGARIKPVALQIEHHPYLTQERLIKYVKNAGIQVVAY 221          
BLAST of FC930975 vs. ExPASy Swiss-Prot
Match: XYL2_CANTR (NADPH-dependent D-xylose reductase II,III OS=Candida tropicalis GN=xyrB PE=1 SV=1)

HSP 1 Score: 151.754 bits (382), Expect = 3.122e-36
Identity = 85/213 (39.91%), Postives = 116/213 (54.46%), Query Frame = 2
Query:   44 IMAITLNNGFKMPIIGLGVWRMDESNIRDLIINAIKIGYRHIDCAADYRNEAEVGEALAEAFSTGLVKREDLFITTKLWNSDHG--HVLEACKDSXXXXXXXXXXXXXVHFPVATKHTGVGT--TDSALDADGVLEIDTTISLETTWHAMEDLVSMGLVRSIGISNYDIFLTRDCLAYSKVKPVVNQFETHPYFQRDSLVKFCQKHGICVTAH 670
            I  I LN+G++MP++G G W+++     D I NAIK GYR  D A DY NE EVGE +  A   GLVKRE+LFIT+KLWN+ H   +V  A   +             +HFP+A K   +           DG       + L  TW A+E LV  G ++SIGISN+   L  D +  + +KP V Q E HPY Q+  L+++ QK GI +T +
Sbjct:    7 IPTIKLNSGYEMPLVGFGCWKVNNETAADQIYNAIKTGYRLFDGAEDYGNEKEVGEGINRAIKEGLVKREELFITSKLWNNFHDPKNVETALNKTLSDLNLDYVDLFLIHFPIAFKFVPIEEKYPPGFYCGDGDNFHYEDVPLLDTWKALEKLVEAGKIKSIGISNFTGALIYDLIRGATIKPAVLQIEHHPYLQQPKLIEYVQKAGIAITGY 219          
BLAST of FC930975 vs. ExPASy Swiss-Prot
Match: ALRB_DICDI (Aldose reductase B OS=Dictyostelium discoideum GN=alrB PE=3 SV=2)

HSP 1 Score: 151.754 bits (382), Expect = 3.122e-36
Identity = 83/203 (40.89%), Postives = 121/203 (59.61%), Query Frame = 2
Query:   77 MPIIGLGVWRMDE-SNIRDLIINAIKIGYRHIDCAADYRNEAEVGEALAEAFSTGLVKREDLFITTKLWNSDH--GHVLEACKDSXXXXXXXXXXXXXVHFPVATKHTGV-GTTDSAL-DADGVLEIDTTISLETTWHAMEDLVSMGLVRSIGISNYDIFLTRDCLAYSKVKPVVNQFETHPYFQRDSLVKFCQKHGICVTAH 670
            +P+IGLG +   +   + D +  A+K GYRHID AA Y NE E+G AL E F+ G +KRED+F  +KLWNS H    V + C+ +             +H+P+A ++    GTT   L D+DG   +   +S+  TW  ME LV  GLV+SIG+SN+++    D L Y+K+KP +NQ E HPY  + +L  FC ++GI +TA+
Sbjct:   17 IPMIGLGTYNGAKVGEVGDAVKVALKSGYRHIDGAAIYMNEKEIGHALKEVFAEGEIKREDIFYVSKLWNSCHHASLVRKHCEKTLEDLGLEYLDLYLIHWPIAFENADPSGTTTQPLRDSDGE-PVLAAVSIRETWQEMEKLVEYGLVKSIGVSNFNVQNLVDLLTYAKIKPAINQVEVHPYLSQPNLKYFCDRYGIVLTAY 218          
BLAST of FC930975 vs. ExPASy Swiss-Prot
Match: XYL1_CANTR (NAD(P)H-dependent D-xylose reductase I,II OS=Candida tropicalis GN=xyrA PE=3 SV=1)

HSP 1 Score: 151.369 bits (381), Expect = 4.077e-36
Identity = 85/213 (39.91%), Postives = 116/213 (54.46%), Query Frame = 2
Query:   44 IMAITLNNGFKMPIIGLGVWRMDESNIRDLIINAIKIGYRHIDCAADYRNEAEVGEALAEAFSTGLVKREDLFITTKLWNSDHG--HVLEACKDSXXXXXXXXXXXXXVHFPVATKHTGVGT--TDSALDADGVLEIDTTISLETTWHAMEDLVSMGLVRSIGISNYDIFLTRDCLAYSKVKPVVNQFETHPYFQRDSLVKFCQKHGICVTAH 670
            I  I LN+G++MP++G G W++  +   D I NAIK GYR  D A DY NE EVGE +  A   GLVKRE+LFIT+KLWN+ H   +V  A   +             +HFP+A K   +           DG       + L  TW A+E LV  G ++SIGISN+   L  D +  + +KP V Q E HPY Q+  L+++ QK GI +T +
Sbjct:    7 IPTIKLNSGYEMPLVGFGCWKVTNATAADQIYNAIKTGYRLFDGAEDYGNEKEVGEGINRAIKEGLVKREELFITSKLWNNFHDPKNVETALNKTLSDLNLDYVDLFLIHFPIAFKFVPIEEKYPPGFYCGDGDNFHYEDVPLLDTWKALEKLVEAGKIKSIGISNFTGALIYDLIRGATIKPAVLQIEHHPYLQQPKLIEYVQKAGIAITGY 219          
BLAST of FC930975 vs. ExPASy Swiss-Prot
Match: ALDR_PIG (Aldose reductase OS=Sus scrofa GN=AKR1B1 PE=1 SV=2)

HSP 1 Score: 151.369 bits (381), Expect = 4.077e-36
Identity = 86/210 (40.95%), Postives = 117/210 (55.71%), Query Frame = 2
Query:   53 ITLNNGFKMPIIGLGVWRMDESNIRDLIINAIKIGYRHIDCAADYRNEAEVGEALAEAFSTGLVKREDLFITTKLWNSDH--GHVLEACKDSXXXXXXXXXXXXXVHFPVATKHTGVGTTDSALDADGVLEIDTTISLETTWHAMEDLVSMGLVRSIGISNYDIFLTRDCLAYS--KVKPVVNQFETHPYFQRDSLVKFCQKHGICVTAH 670
            + L  G KMPI+GLG W+     + + +  AI +GYRHIDCA  Y+NE EVG  L E     +VKREDLFI +KLW +DH    V  AC+ +             +H+P   K    G     LD DG +  D +  +E TW AME+LV  GLV++IG+SN++       L     K KP VNQ E HPY  ++ L+++C+  GI VTA+
Sbjct:    5 LVLYTGAKMPILGLGTWKSPPGKVTEAVKVAIDLGYRHIDCAHVYQNENEVGLGLQEKLQGQVVKREDLFIVSKLWCTDHEKNLVKGACQTTLRDLKLDYLDLYLIHWPTGFK---PGKDPFPLDGDGNVVPDESDFVE-TWEAMEELVDEGLVKAIGVSNFNHLQVEKILNKPGLKYKPAVNQIEVHPYLTQEKLIEYCKSKGIVVTAY 210          
BLAST of FC930975 vs. ExPASy Swiss-Prot
Match: AK1A1_PIG (Alcohol dehydrogenase [NADP+] OS=Sus scrofa GN=AKR1A1 PE=1 SV=2)

HSP 1 Score: 150.599 bits (379), Expect = 6.954e-36
Identity = 83/209 (39.71%), Postives = 119/209 (56.94%), Query Frame = 2
Query:   53 ITLNNGFKMPIIGLGVWRMDESNIRDLIINAIKIGYRHIDCAADYRNEAEVGEALAEAFSTG-LVKREDLFITTKLWNSDH--GHVLEACKDSXXXXXXXXXXXXXVHFPVATKHTGVGTTDSALDADGVLEIDTTISLETTWHAMEDLVSMGLVRSIGISNYDIFLTRDCLAYSKVKPVVNQFETHPYFQRDSLVKFCQKHGICVTAH 670
            + L+ G KMP+IGLG W+ +   ++  I  A+ +GYRHIDCAA Y NE E+GEAL E    G  V RE+LF+T+KLWN+ H    V  A + +             +H+P A +    G      +ADG +  D T   + TW A+E LV+ GLVR++G+SN+      D L+ + V+P V Q E HPY  ++ L+  CQ  G+ VTA+
Sbjct:    6 VLLHTGQKMPLIGLGTWKSEPGQVKAAIKYALTVGYRHIDCAAIYGNELEIGEALTETVGPGKAVPREELFVTSKLWNTKHHPEDVEPALRKTLADLQLEYLDLYLMHWPYAFER---GDNPFPKNADGTIRYDAT-HYKDTWKALEALVAKGLVRALGLSNFSSRQIDDVLSVASVRPAVLQVECHPYLAQNELIAHCQARGLEVTAY 210          
The following BLAST results are available for this feature:
BLAST of FC930975 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 127
Match NameE-valueIdentityDescription
ALDR_RABIT1.073e-3642.18Aldose reductase OS=Oryctolagus cuniculus GN=AKR1B... [more]
ALDR_HUMAN1.073e-3642.52Aldose reductase OS=Homo sapiens GN=AKR1B1 PE=1 SV... [more]
AK1A1_BOVIN1.073e-3640.67Alcohol dehydrogenase [NADP+] OS=Bos taurus GN=AKR... [more]
AK1A1_CHICK1.401e-3638.76Alcohol dehydrogenase [NADP+] OS=Gallus gallus GN=... [more]
XYL1_KLULA2.390e-3640.47NAD(P)H-dependent D-xylose reductase OS=Kluyveromy... [more]
XYL2_CANTR3.122e-3639.91NADPH-dependent D-xylose reductase II,III OS=Candi... [more]
ALRB_DICDI3.122e-3640.89Aldose reductase B OS=Dictyostelium discoideum GN=... [more]
XYL1_CANTR4.077e-3639.91NAD(P)H-dependent D-xylose reductase I,II OS=Candi... [more]
ALDR_PIG4.077e-3640.95Aldose reductase OS=Sus scrofa GN=AKR1B1 PE=1 SV=2[more]
AK1A1_PIG6.954e-3639.71Alcohol dehydrogenase [NADP+] OS=Sus scrofa GN=AKR... [more]

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Properties
Property NameValue
Genbank descriptionC34100A10EF PostHarvP1 Citrus clementina cDNA clone C34100A10, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC930975 ID=FC930975; Name=FC930975; organism=Citrus clementina; type=EST; length=671bp
CAGAGCAAAAGCAGAGAAAGAAAGGGTGAGTGAGTAAAGAGAAATAATGG
CAATAACACTCAACAATGGATTCAAGATGCCAATAATTGGACTGGGTGTT
TGGCGCATGGATGAATCAAACATTAGAGACCTCATCATCAATGCCATCAA
GATTGGCTATCGCCATATTGACTGTGCTGCTGATTATAGGAATGAAGCGG
AAGTTGGGGAGGCACTTGCAGAAGCATTTAGCACTGGGCTTGTCAAGAGG
GAGGATCTTTTCATTACCACCAAGCTTTGGAATTCAGATCATGGACATGT
TCTGGAGGCCTGTAAGGACAGTTTAAAGAAGCTCCAACTGGATTATCTAG
ATCTCTACCTCGTCCATTTTCCTGTAGCCACAAAACACACTGGCGTTGGT
ACAACTGATAGTGCATTAGATGCGGATGGTGTGCTGGAGATAGACACAAC
TATATCATTGGAAACAACCTGGCATGCAATGGAGGATTTGGTTTCAATGG
GTTTAGTTCGAAGCATTGGGATCAGCAACTATGACATCTTTTTAACAAGA
GACTGCTTAGCTTACTCCAAAGTGAAGCCGGTGGTGAATCAGTTTGAAAC
TCACCCATACTTCCAACGTGATTCTCTTGTCAAGTTCTGTCAGAAGCATG
GGATATGTGTCACAGCTCATA
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