FC930975

Overview
NameFC930975
Unique NameFC930975
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length671
Libraries
Library NameType
PostHarvP1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC930975 vs. ExPASy Swiss-Prot
Match: Y1919_MYCSJ (Uncharacterized oxidoreductase Mjls_1919 OS=Mycobacterium sp. (strain JLS) GN=Mjls_1919 PE=3 SV=1)

HSP 1 Score: 93.2041 bits (230), Expect = 1.318e-18
Identity = 63/207 (30.43%), Postives = 96/207 (46.38%), Query Frame = 2
Query:   53 ITLNNGFKMPIIGLGVWRMDESNIRDLIINAIKIGYRHIDCAADYRNEAEVGEALAEAFSTGLVKREDLFITTKLWNSDHGH--VLEACKDSXXXXXXXXXXXXXVHFPVATKHTGVGTTDSALDADGVLEIDTTISLETTWHAMEDLVSMGLVRSIGISNYDIFLTRDCLAYSKVKPVVNQFETHPYFQRDSLVKFCQKHGICVTA 667
            + LN+G  +P +GLGVW+    +    +  A+  GYRH+D AA Y NE + G A+A+   +GL  R  +++ TKLWNS+ G+   L A + S             +H+PV  K+  V                       T+ A   L   G +RSIG+SN++    R  +  + + P VNQ E HP   +  L +   + GI   A
Sbjct:    6 VALNDGNSIPQVGLGVWQTPPEDTERAVAAALAAGYRHVDTAAAYGNEEQTGRAIAQ---SGL-DRSQVYLVTKLWNSEQGYDATLAAFEASVDRLGVDYLDLYLIHWPVPEKNLFV----------------------DTFRAFARLREDGRIRSIGVSNFEPEHLRVLIDSTGIVPAVNQIELHPLLPQRELRELHAQLGIATEA 186          
BLAST of FC930975 vs. ExPASy Swiss-Prot
Match: Y1985_MYCSK (Uncharacterized oxidoreductase Mkms_1985 OS=Mycobacterium sp. (strain KMS) GN=Mkms_1985 PE=3 SV=1)

HSP 1 Score: 92.8189 bits (229), Expect = 1.721e-18
Identity = 63/207 (30.43%), Postives = 96/207 (46.38%), Query Frame = 2
Query:   53 ITLNNGFKMPIIGLGVWRMDESNIRDLIINAIKIGYRHIDCAADYRNEAEVGEALAEAFSTGLVKREDLFITTKLWNSDHGH--VLEACKDSXXXXXXXXXXXXXVHFPVATKHTGVGTTDSALDADGVLEIDTTISLETTWHAMEDLVSMGLVRSIGISNYDIFLTRDCLAYSKVKPVVNQFETHPYFQRDSLVKFCQKHGICVTA 667
            + LN+G  +P +GLGVW+    +    +  A+  GYRH+D AA Y NE + G A+A+   +GL  R  +++ TKLWNS+ G+   L A + S             +H+PV  K+  V                       T+ A   L   G +RSIG+SN++    R  +  + + P VNQ E HP   +  L +   + GI   A
Sbjct:    6 VALNDGNSIPQVGLGVWQTPPEDTERAVAAALAAGYRHVDTAAAYGNEEQTGRAIAQ---SGL-DRSQVYLVTKLWNSEQGYDATLAAFEASVDRLGVDYLDLYLIHWPVPEKNLFV----------------------DTFKAFARLREDGRIRSIGVSNFEPEHLRVLIDSTGIVPAVNQIELHPLLPQRELRELHAQLGIATEA 186          
BLAST of FC930975 vs. ExPASy Swiss-Prot
Match: DKGB_ECOLI (2,5-diketo-D-gluconic acid reductase B OS=Escherichia coli (strain K12) GN=dkgB PE=1 SV=2)

HSP 1 Score: 91.2781 bits (225), Expect = 5.007e-18
Identity = 60/201 (29.85%), Postives = 97/201 (48.26%), Query Frame = 2
Query:   77 MPIIGLGVWRMDESNIRDLIINAIKIGYRHIDCAADYRNEAEVGEALAEAFSTGLVKREDLFITTKLW--NSDHGHVLEACKDSXXXXXXXXXXXXXVHFPVATKHTGVGTTDSALDADGVLEIDTTISLETTWHAMEDLVSMGLVRSIGISNYDIFLTRDCLAYSKVKPV-VNQFETHPYFQRDSLVKFCQKHGICVTAH 670
            +P  GLG +R+ +  +   +I A+++GYR ID A  Y NEA VG+A+AE+     V R +L+ITTK+W  N     ++ + K+S             +H+P                       +  +S+E    A+ +    GL R IGISN+ I L    +A    + +  NQ E  PY Q   +V + ++HGI +T++
Sbjct:    3 IPAFGLGTFRLKDDVVISSVITALELGYRAIDTAQIYDNEAAVGQAIAESG----VPRHELYITTKIWIENLSKDKLIPSLKESLQKLRTDYVDLTLIHWP---------------------SPNDEVSVEEFMQALLEAKKQGLTREIGISNFTIPLMEKAIAAVGAENIATNQIELSPYLQNRKVVAWAKQHGIHITSY 178          
BLAST of FC930975 vs. ExPASy Swiss-Prot
Match: Y1987_MYCUA (Uncharacterized oxidoreductase MUL_1987 OS=Mycobacterium ulcerans (strain Agy99) GN=MUL_1987 PE=3 SV=1)

HSP 1 Score: 88.9669 bits (219), Expect = 2.485e-17
Identity = 63/209 (30.14%), Postives = 92/209 (44.02%), Query Frame = 2
Query:   50 AITLNNGFKMPIIGLGVWRMDESNIRDLIINAIKIGYRHIDCAADYRNEAEVGEALAEAFSTGLVKREDLFITTKLWNSDHGHVL--EACKDSXXXXXXXXXXXXXVHFPVATKHTGVGTTDSALDADGVLEIDTTISLETTWHAMEDLVSMGLVRSIGISNYDIFLTRDCLAYSKVKPVVNQFETHPYFQRDSLVKFCQKHGICVTAH 670
            +I LN+   MP++G+GV  + +      +  A++IG R ID AA Y NEA VG ALA +     + R +LF+TTK+  +DHG     EACK S             +H+P       V      + A G                       G  RSIG+SN+      + +  + V P VNQ E HP   +D L K   +H +   ++
Sbjct:   12 SIALNDENTMPVLGMGVAGLSDDETERAVSAALEIGCRLIDTAAAYGNEAAVGRALAASG----IPRAELFVTTKVATADHGFTASREACKASLDRLGLDYVDLYLIHWPAPAVGKYVDAFGGLIQARG----------------------EGFTRSIGVSNFTEEHVSNVIDLTFVTPAVNQVELHPLLNQDELRKANAQHNVVTQSY 194          
BLAST of FC930975 vs. ExPASy Swiss-Prot
Match: Y1744_MYCMM (Uncharacterized oxidoreductase MMAR_1744 OS=Mycobacterium marinum (strain ATCC BAA-535 / M) GN=MMAR_1744 PE=3 SV=1)

HSP 1 Score: 88.5817 bits (218), Expect = 3.245e-17
Identity = 62/209 (29.67%), Postives = 92/209 (44.02%), Query Frame = 2
Query:   50 AITLNNGFKMPIIGLGVWRMDESNIRDLIINAIKIGYRHIDCAADYRNEAEVGEALAEAFSTGLVKREDLFITTKLWNSDHGHVL--EACKDSXXXXXXXXXXXXXVHFPVATKHTGVGTTDSALDADGVLEIDTTISLETTWHAMEDLVSMGLVRSIGISNYDIFLTRDCLAYSKVKPVVNQFETHPYFQRDSLVKFCQKHGICVTAH 670
            +I LN+   MP++G+GV  + +      +  A++IG R ID AA Y NEA VG A+A +     + R +LF+TTK+  +DHG     EACK S             +H+P       V      + A G                       G  RSIG+SN+      + +  + V P VNQ E HP   +D L K   +H +   ++
Sbjct:   11 SIALNDENTMPVLGMGVAGLSDDETERAVSAALEIGCRLIDTAAAYGNEAAVGRAIAASG----IPRAELFVTTKVATADHGFTASREACKASLDRLGLDYVDLYLIHWPAPAAGKYVDAFGGLIQARG----------------------EGFTRSIGVSNFTEEHVSNVIDLTFVTPAVNQVELHPLLNQDELRKANAQHNVVTQSY 193          
BLAST of FC930975 vs. ExPASy Swiss-Prot
Match: DKGB_YERPE (2,5-diketo-D-gluconic acid reductase B OS=Yersinia pestis GN=dkgB PE=3 SV=1)

HSP 1 Score: 88.5817 bits (218), Expect = 3.245e-17
Identity = 59/202 (29.21%), Postives = 95/202 (47.03%), Query Frame = 2
Query:   77 MPIIGLGVWRMDESNIRDLIINAIKIGYRHIDCAADYRNEAEVGEALAEAFSTGLVKREDLFITTKLW--NSDHGHVLEACKDSXXXXXXXXXXXXXVHFPVATKHTGVGT-TDSALDADGVLEIDTTISLETTWHAMEDLVSMGLVRSIGISNYDIFLTRDCLAYSKVKPV-VNQFETHPYFQRDSLVKFCQKHGICVTAH 670
            +P+ GLG +R+ +  + D +  A+ +GYR ID A  Y NEA VG+A+ E+     + R++LFITTK+W  N     ++ + ++S             +H+P       V       L A G                      +GL R IGISN+ I L +  +A    + +  NQ E  P  Q  ++V F +++GI VT++
Sbjct:    3 IPVFGLGTFRLQDQIVIDSVSQALTLGYRAIDTAQIYENEAPVGQAIQESG----INRDELFITTKIWIANLSKDKLIPSLRESIQKLKTDYVDLTLIHWPSPNDEVSVAEFMSELLKAKG----------------------LGLTRQIGISNFTIDLMKQAIAAVGAEEIATNQIELSPLLQNRNVVDFAKQNGIAVTSY 178          
BLAST of FC930975 vs. ExPASy Swiss-Prot
Match: Y2999_MYCTA (Uncharacterized oxidoreductase MRA_2999 OS=Mycobacterium tuberculosis (strain ATCC 25177 / H37Ra) GN=MRA_2999 PE=3 SV=1)

HSP 1 Score: 88.1965 bits (217), Expect = 4.239e-17
Identity = 66/209 (31.58%), Postives = 92/209 (44.02%), Query Frame = 2
Query:   50 AITLNNGFKMPIIGLGVWRMDESNIRDLIINAIKIGYRHIDCAADYRNEAEVGEALAEAFSTGLVKREDLFITTKLWNSDHGHV--LEACKDSXXXXXXXXXXXXXVHFPVATKHTGVGTTDSALDADGVLEIDTTISLETTWHAMEDLVSMGLVRSIGISNYDIFLTRDCLAYSKVKPVVNQFETHPYFQRDSLVKFCQKHGICVTAH 670
            +ITLN+   MP++GLGV  + +      +  A++IG R ID A  Y NEA VG A+A +     V RE+LF+TTKL   D G     EAC+ S             +H+P       VG    A                  W  M      G  RSIG+SN+      + +  + V P VNQ E HP   +D L K   +H +   ++
Sbjct:   12 SITLNDEHTMPVLGLGVAELSDDETERAVSAALEIGCRLIDTAYAYGNEAAVGRAIAASG----VAREELFVTTKLATPDQGFTRSQEACRASLDRLGLDYVDLYLIHWPAPP----VGKYVDA------------------WGGMIQSRGEGHARSIGVSNFTAENIENLIDLTFVTPAVNQIELHPLLNQDELRKANAQHTVVTQSY 194          
BLAST of FC930975 vs. ExPASy Swiss-Prot
Match: Y2996_MYCBO (Uncharacterized oxidoreductase Mb2996 OS=Mycobacterium bovis GN=Mb2996 PE=1 SV=1)

HSP 1 Score: 88.1965 bits (217), Expect = 4.239e-17
Identity = 66/209 (31.58%), Postives = 92/209 (44.02%), Query Frame = 2
Query:   50 AITLNNGFKMPIIGLGVWRMDESNIRDLIINAIKIGYRHIDCAADYRNEAEVGEALAEAFSTGLVKREDLFITTKLWNSDHGHV--LEACKDSXXXXXXXXXXXXXVHFPVATKHTGVGTTDSALDADGVLEIDTTISLETTWHAMEDLVSMGLVRSIGISNYDIFLTRDCLAYSKVKPVVNQFETHPYFQRDSLVKFCQKHGICVTAH 670
            +ITLN+   MP++GLGV  + +      +  A++IG R ID A  Y NEA VG A+A +     V RE+LF+TTKL   D G     EAC+ S             +H+P       VG    A                  W  M      G  RSIG+SN+      + +  + V P VNQ E HP   +D L K   +H +   ++
Sbjct:   12 SITLNDEHTMPVLGLGVAELSDDETERAVSAALEIGCRLIDTAYAYGNEAAVGRAIAASG----VAREELFVTTKLATPDQGFTRSQEACRASLDRLGLDYVDLYLIHWPAPP----VGKYVDA------------------WGGMIQSRGEGHARSIGVSNFTAEHIENLIDLTFVTPAVNQIELHPLLNQDELRKANAQHTVVTQSY 194          
BLAST of FC930975 vs. ExPASy Swiss-Prot
Match: Y2993_MYCBP (Uncharacterized oxidoreductase BCG_2993 OS=Mycobacterium bovis (strain BCG / Pasteur 1173P2) GN=BCG_2993 PE=3 SV=1)

HSP 1 Score: 88.1965 bits (217), Expect = 4.239e-17
Identity = 66/209 (31.58%), Postives = 92/209 (44.02%), Query Frame = 2
Query:   50 AITLNNGFKMPIIGLGVWRMDESNIRDLIINAIKIGYRHIDCAADYRNEAEVGEALAEAFSTGLVKREDLFITTKLWNSDHGHV--LEACKDSXXXXXXXXXXXXXVHFPVATKHTGVGTTDSALDADGVLEIDTTISLETTWHAMEDLVSMGLVRSIGISNYDIFLTRDCLAYSKVKPVVNQFETHPYFQRDSLVKFCQKHGICVTAH 670
            +ITLN+   MP++GLGV  + +      +  A++IG R ID A  Y NEA VG A+A +     V RE+LF+TTKL   D G     EAC+ S             +H+P       VG    A                  W  M      G  RSIG+SN+      + +  + V P VNQ E HP   +D L K   +H +   ++
Sbjct:   12 SITLNDEHTMPVLGLGVAELSDDETERAVSAALEIGCRLIDTAYAYGNEAAVGRAIAASG----VAREELFVTTKLATPDQGFTRSQEACRASLDRLGLDYVDLYLIHWPAPP----VGKYVDA------------------WGGMIQSRGEGHARSIGVSNFTAEHIENLIDLTFVTPAVNQIELHPLLNQDELRKANAQHTVVTQSY 194          
BLAST of FC930975 vs. ExPASy Swiss-Prot
Match: Y2971_MYCTU (Uncharacterized oxidoreductase Rv2971/MT3049 OS=Mycobacterium tuberculosis GN=Rv2971 PE=3 SV=2)

HSP 1 Score: 88.1965 bits (217), Expect = 4.239e-17
Identity = 66/209 (31.58%), Postives = 92/209 (44.02%), Query Frame = 2
Query:   50 AITLNNGFKMPIIGLGVWRMDESNIRDLIINAIKIGYRHIDCAADYRNEAEVGEALAEAFSTGLVKREDLFITTKLWNSDHGHV--LEACKDSXXXXXXXXXXXXXVHFPVATKHTGVGTTDSALDADGVLEIDTTISLETTWHAMEDLVSMGLVRSIGISNYDIFLTRDCLAYSKVKPVVNQFETHPYFQRDSLVKFCQKHGICVTAH 670
            +ITLN+   MP++GLGV  + +      +  A++IG R ID A  Y NEA VG A+A +     V RE+LF+TTKL   D G     EAC+ S             +H+P       VG    A                  W  M      G  RSIG+SN+      + +  + V P VNQ E HP   +D L K   +H +   ++
Sbjct:   12 SITLNDEHTMPVLGLGVAELSDDETERAVSAALEIGCRLIDTAYAYGNEAAVGRAIAASG----VAREELFVTTKLATPDQGFTRSQEACRASLDRLGLDYVDLYLIHWPAPP----VGKYVDA------------------WGGMIQSRGEGHARSIGVSNFTAENIENLIDLTFVTPAVNQIELHPLLNQDELRKANAQHTVVTQSY 194          
The following BLAST results are available for this feature:
BLAST of FC930975 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 127
Match NameE-valueIdentityDescription
Y1919_MYCSJ1.318e-1830.43Uncharacterized oxidoreductase Mjls_1919 OS=Mycoba... [more]
Y1985_MYCSK1.721e-1830.43Uncharacterized oxidoreductase Mkms_1985 OS=Mycoba... [more]
DKGB_ECOLI5.007e-1829.852,5-diketo-D-gluconic acid reductase B OS=Escheric... [more]
Y1987_MYCUA2.485e-1730.14Uncharacterized oxidoreductase MUL_1987 OS=Mycobac... [more]
Y1744_MYCMM3.245e-1729.67Uncharacterized oxidoreductase MMAR_1744 OS=Mycoba... [more]
DKGB_YERPE3.245e-1729.212,5-diketo-D-gluconic acid reductase B OS=Yersinia... [more]
Y2999_MYCTA4.239e-1731.58Uncharacterized oxidoreductase MRA_2999 OS=Mycobac... [more]
Y2996_MYCBO4.239e-1731.58Uncharacterized oxidoreductase Mb2996 OS=Mycobacte... [more]
Y2993_MYCBP4.239e-1731.58Uncharacterized oxidoreductase BCG_2993 OS=Mycobac... [more]
Y2971_MYCTU4.239e-1731.58Uncharacterized oxidoreductase Rv2971/MT3049 OS=My... [more]

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Properties
Property NameValue
Genbank descriptionC34100A10EF PostHarvP1 Citrus clementina cDNA clone C34100A10, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC930975 ID=FC930975; Name=FC930975; organism=Citrus clementina; type=EST; length=671bp
CAGAGCAAAAGCAGAGAAAGAAAGGGTGAGTGAGTAAAGAGAAATAATGG
CAATAACACTCAACAATGGATTCAAGATGCCAATAATTGGACTGGGTGTT
TGGCGCATGGATGAATCAAACATTAGAGACCTCATCATCAATGCCATCAA
GATTGGCTATCGCCATATTGACTGTGCTGCTGATTATAGGAATGAAGCGG
AAGTTGGGGAGGCACTTGCAGAAGCATTTAGCACTGGGCTTGTCAAGAGG
GAGGATCTTTTCATTACCACCAAGCTTTGGAATTCAGATCATGGACATGT
TCTGGAGGCCTGTAAGGACAGTTTAAAGAAGCTCCAACTGGATTATCTAG
ATCTCTACCTCGTCCATTTTCCTGTAGCCACAAAACACACTGGCGTTGGT
ACAACTGATAGTGCATTAGATGCGGATGGTGTGCTGGAGATAGACACAAC
TATATCATTGGAAACAACCTGGCATGCAATGGAGGATTTGGTTTCAATGG
GTTTAGTTCGAAGCATTGGGATCAGCAACTATGACATCTTTTTAACAAGA
GACTGCTTAGCTTACTCCAAAGTGAAGCCGGTGGTGAATCAGTTTGAAAC
TCACCCATACTTCCAACGTGATTCTCTTGTCAAGTTCTGTCAGAAGCATG
GGATATGTGTCACAGCTCATA
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