FC930975

Overview
NameFC930975
Unique NameFC930975
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length671
Libraries
Library NameType
PostHarvP1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC930975 vs. ExPASy Swiss-Prot
Match: Y1918_MYCSJ (Uncharacterized oxidoreductase Mjls_1918 OS=Mycobacterium sp. (strain JLS) GN=Mjls_1918 PE=3 SV=1)

HSP 1 Score: 81.6481 bits (200), Expect = 3.967e-15
Identity = 58/211 (27.49%), Postives = 95/211 (45.02%), Query Frame = 2
Query:   44 IMAITLNNGFKMPIIGLGVWRMDESNIRDLIINAIKIGYRHIDCAADYRNEAEVGEALAEAFSTGLVKREDLFITTKLWNSDHGH--VLEACKDSXXXXXXXXXXXXXVHFPVATKHTGVGTTDSALDADGVLEIDTTISLETTWHAMEDLVSMGLVRSIGISNYDIFLTRDCLAYSKVKPVVNQFETHPYFQRDSLVKFCQKHGICVTAH 670
            I +++LN+G  +P++GLGV  + ES     +  A++ GYR ID AA Y NEA VG A+    +   + RE++++TTKL  +D G     +A + S             +H+P        G     +D               +W  +      G+ RSIG+ N++     + +  S   P +NQ E HP   +  L +    +GI   A+
Sbjct:   11 IPSVSLNDGHSIPVLGLGVGELSESEAERSVAAALEAGYRLIDTAAVYGNEAAVGRAV----NASGIPREEIYVTTKLAVADQGFGTSQDAARASLERLGLDYVDLYLIHWP-------AGDHGKYID---------------SWGGLMKAKQDGVARSIGVCNFNAEHLSNIIDLSFFTPAINQIELHPLLNQAELREVNAGYGIVTEAY 195          
BLAST of FC930975 vs. ExPASy Swiss-Prot
Match: Y1669_MYCLE (Uncharacterized oxidoreductase ML1669 OS=Mycobacterium leprae GN=ML1669 PE=3 SV=1)

HSP 1 Score: 80.8777 bits (198), Expect = 6.767e-15
Identity = 63/211 (29.86%), Postives = 89/211 (42.18%), Query Frame = 2
Query:   44 IMAITLNNGFKMPIIGLGVWRMDESNIRDLIINAIKIGYRHIDCAADYRNEAEVGEALAEAFSTGLVKREDLFITTKLWNSDHGHV--LEACKDSXXXXXXXXXXXXXVHFPVATKHTGVGTTDSALDADGVLEIDTTISLETTWHAMEDLVSMGLVRSIGISNYDIFLTRDCLAYSKVKPVVNQFETHPYFQRDSLVKFCQKHGICVTAH 670
            I +ITLN+   MP++GLGV  + E      ++ A++IG R ID AA Y NEA V  A+A +     + R  LF+TTKL   D G     +AC  S             +H+P       VG    A                  W  M      G  RSIG+ N+        +  + V P VNQ E HP   +D + K   +H +   ++
Sbjct:   10 IPSITLNDENTMPLLGLGVAELSEDETERAVLAALEIGCRLIDTAAAYGNEAAVSRAIAASG----IPRAQLFVTTKLATPDQGFTKSQDACNASLDRLGMDYVDLYLIHWPAPP----VGQYVDA------------------WGGMIQSRGEGHARSIGVCNFTEEHLSAIIDLTFVTPAVNQIELHPLLNQDEMRKSNAQHNVITQSY 194          
BLAST of FC930975 vs. ExPASy Swiss-Prot
Match: Y1669_MYCLB (Uncharacterized oxidoreductase MLBr01669 OS=Mycobacterium leprae (strain Br4923) GN=MLBr01669 PE=3 SV=1)

HSP 1 Score: 80.8777 bits (198), Expect = 6.767e-15
Identity = 63/211 (29.86%), Postives = 89/211 (42.18%), Query Frame = 2
Query:   44 IMAITLNNGFKMPIIGLGVWRMDESNIRDLIINAIKIGYRHIDCAADYRNEAEVGEALAEAFSTGLVKREDLFITTKLWNSDHGHV--LEACKDSXXXXXXXXXXXXXVHFPVATKHTGVGTTDSALDADGVLEIDTTISLETTWHAMEDLVSMGLVRSIGISNYDIFLTRDCLAYSKVKPVVNQFETHPYFQRDSLVKFCQKHGICVTAH 670
            I +ITLN+   MP++GLGV  + E      ++ A++IG R ID AA Y NEA V  A+A +     + R  LF+TTKL   D G     +AC  S             +H+P       VG    A                  W  M      G  RSIG+ N+        +  + V P VNQ E HP   +D + K   +H +   ++
Sbjct:   10 IPSITLNDENTMPLLGLGVAELSEDETERAVLAALEIGCRLIDTAAAYGNEAAVSRAIAASG----IPRAQLFVTTKLATPDQGFTKSQDACNASLDRLGMDYVDLYLIHWPAPP----VGQYVDA------------------WGGMIQSRGEGHARSIGVCNFTEEHLSAIIDLTFVTPAVNQIELHPLLNQDEMRKSNAQHNVITQSY 194          
BLAST of FC930975 vs. ExPASy Swiss-Prot
Match: Y1984_MYCSK (Uncharacterized oxidoreductase Mkms_1984 OS=Mycobacterium sp. (strain KMS) GN=Mkms_1984 PE=3 SV=1)

HSP 1 Score: 80.4925 bits (197), Expect = 8.838e-15
Identity = 57/211 (27.01%), Postives = 95/211 (45.02%), Query Frame = 2
Query:   44 IMAITLNNGFKMPIIGLGVWRMDESNIRDLIINAIKIGYRHIDCAADYRNEAEVGEALAEAFSTGLVKREDLFITTKLWNSDHGH--VLEACKDSXXXXXXXXXXXXXVHFPVATKHTGVGTTDSALDADGVLEIDTTISLETTWHAMEDLVSMGLVRSIGISNYDIFLTRDCLAYSKVKPVVNQFETHPYFQRDSLVKFCQKHGICVTAH 670
            I +++LN+G  +P++GLGV  + E+     +  A++ GYR ID AA Y NEA VG A+    +   + RE++++TTKL  +D G     +A + S             +H+P        G     +D               +W  +      G+ RSIG+ N++     + +  S   P +NQ E HP   +  L +    +GI   A+
Sbjct:   11 IPSVSLNDGHSIPVLGLGVGELSEAEAERSVAAALEAGYRLIDTAAVYGNEAAVGRAV----NASGIPREEIYVTTKLAVADQGFGTSQDAARASLERLGLDYVDLYLIHWP-------AGDHGKYID---------------SWGGLMKAKQDGVARSIGVCNFNAEHLSNIIDLSFFTPAINQIELHPLLNQAELREVNAGYGIVTEAY 195          
BLAST of FC930975 vs. ExPASy Swiss-Prot
Match: Y1938_MYCSS (Uncharacterized oxidoreductase Mmcs_1938 OS=Mycobacterium sp. (strain MCS) GN=Mmcs_1938 PE=3 SV=1)

HSP 1 Score: 80.4925 bits (197), Expect = 8.838e-15
Identity = 57/211 (27.01%), Postives = 95/211 (45.02%), Query Frame = 2
Query:   44 IMAITLNNGFKMPIIGLGVWRMDESNIRDLIINAIKIGYRHIDCAADYRNEAEVGEALAEAFSTGLVKREDLFITTKLWNSDHGH--VLEACKDSXXXXXXXXXXXXXVHFPVATKHTGVGTTDSALDADGVLEIDTTISLETTWHAMEDLVSMGLVRSIGISNYDIFLTRDCLAYSKVKPVVNQFETHPYFQRDSLVKFCQKHGICVTAH 670
            I +++LN+G  +P++GLGV  + E+     +  A++ GYR ID AA Y NEA VG A+    +   + RE++++TTKL  +D G     +A + S             +H+P        G     +D               +W  +      G+ RSIG+ N++     + +  S   P +NQ E HP   +  L +    +GI   A+
Sbjct:   11 IPSVSLNDGHSIPVLGLGVGELSEAEAERSVAAALEAGYRLIDTAAVYGNEAAVGRAV----NASGIPREEIYVTTKLAVADQGFGTSQDAARASLERLGLDYVDLYLIHWP-------AGDHGKYID---------------SWGGLMKAKQDGVARSIGVCNFNAEHLSNIIDLSFFTPAINQIELHPLLNQAELREVNAGYGIVTEAY 195          
BLAST of FC930975 vs. ExPASy Swiss-Prot
Match: Y2407_MYCS2 (Uncharacterized oxidoreductase MSMEG_2407 OS=Mycobacterium smegmatis GN=MSMEG_2407 PE=3 SV=1)

HSP 1 Score: 78.5666 bits (192), Expect = 3.358e-14
Identity = 56/211 (26.54%), Postives = 93/211 (44.08%), Query Frame = 2
Query:   44 IMAITLNNGFKMPIIGLGVWRMDESNIRDLIINAIKIGYRHIDCAADYRNEAEVGEALAEAFSTGLVKREDLFITTKLWNSDHGHVLE--ACKDSXXXXXXXXXXXXXVHFPVATKHTGVGTTDSALDADGVLEIDTTISLETTWHAMEDLVSMGLVRSIGISNYDIFLTRDCLAYSKVKPVVNQFETHPYFQRDSLVKFCQKHGICVTAH 670
            I  +TLN+   +P++G+GV  + +S     +  A++ GYR ID AA Y NEA VG A+A +     + R+++++TTKL   D G      A + S             +H+P        G T   +D               +W  +  +   G+ RSIG+ N+        ++ +   P VNQ E HP   + +L +    + I   A+
Sbjct:   11 IPTVTLNDDNTLPVVGIGVGELSDSEAERSVSAALEAGYRLIDTAAAYGNEAAVGRAIAASG----IPRDEIYVTTKLATPDQGFTSSQAAARASLERLGLDYVDLYLIHWP-------GGDTSKYVD---------------SWGGLMKVKEDGIARSIGVCNFGAEDLETIVSLTYFTPAVNQIELHPLLNQAALREVNAGYNIVTEAY 195          
BLAST of FC930975 vs. ExPASy Swiss-Prot
Match: AKCL1_HUMAN (Aldo-keto reductase family 1 member C-like protein 1 OS=Homo sapiens GN=AKR1CL1 PE=2 SV=2)

HSP 1 Score: 69.3218 bits (168), Expect = 2.038e-11
Identity = 35/80 (43.75%), Postives = 51/80 (63.75%), Query Frame = 2
Query:   50 AITLNNGFKMPIIGLGVWRMD---ESNIRDLIINAIKIGYRHIDCAADYRNEAEVGEALAEAFSTGLVKREDLFITTKLW 280
            ++ LN+G  MP++G G +  D   +S   +    AI +G+RHID A  Y+NE EVG+A+ E  + G VKRE++F T KLW
Sbjct:   10 SVRLNDGPFMPVLGFGTYAPDHTPKSQAAEATKVAIDVGFRHIDSAYLYQNEEEVGQAIWEKIADGTVKREEIFYTIKLW 89          
The following BLAST results are available for this feature:
BLAST of FC930975 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 127
Match NameE-valueIdentityDescription
Y1918_MYCSJ3.967e-1527.49Uncharacterized oxidoreductase Mjls_1918 OS=Mycoba... [more]
Y1669_MYCLE6.767e-1529.86Uncharacterized oxidoreductase ML1669 OS=Mycobacte... [more]
Y1669_MYCLB6.767e-1529.86Uncharacterized oxidoreductase MLBr01669 OS=Mycoba... [more]
Y1984_MYCSK8.838e-1527.01Uncharacterized oxidoreductase Mkms_1984 OS=Mycoba... [more]
Y1938_MYCSS8.838e-1527.01Uncharacterized oxidoreductase Mmcs_1938 OS=Mycoba... [more]
Y2407_MYCS23.358e-1426.54Uncharacterized oxidoreductase MSMEG_2407 OS=Mycob... [more]
AKCL1_HUMAN2.038e-1143.75Aldo-keto reductase family 1 member C-like protein... [more]

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Properties
Property NameValue
Genbank descriptionC34100A10EF PostHarvP1 Citrus clementina cDNA clone C34100A10, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC930975 ID=FC930975; Name=FC930975; organism=Citrus clementina; type=EST; length=671bp
CAGAGCAAAAGCAGAGAAAGAAAGGGTGAGTGAGTAAAGAGAAATAATGG
CAATAACACTCAACAATGGATTCAAGATGCCAATAATTGGACTGGGTGTT
TGGCGCATGGATGAATCAAACATTAGAGACCTCATCATCAATGCCATCAA
GATTGGCTATCGCCATATTGACTGTGCTGCTGATTATAGGAATGAAGCGG
AAGTTGGGGAGGCACTTGCAGAAGCATTTAGCACTGGGCTTGTCAAGAGG
GAGGATCTTTTCATTACCACCAAGCTTTGGAATTCAGATCATGGACATGT
TCTGGAGGCCTGTAAGGACAGTTTAAAGAAGCTCCAACTGGATTATCTAG
ATCTCTACCTCGTCCATTTTCCTGTAGCCACAAAACACACTGGCGTTGGT
ACAACTGATAGTGCATTAGATGCGGATGGTGTGCTGGAGATAGACACAAC
TATATCATTGGAAACAACCTGGCATGCAATGGAGGATTTGGTTTCAATGG
GTTTAGTTCGAAGCATTGGGATCAGCAACTATGACATCTTTTTAACAAGA
GACTGCTTAGCTTACTCCAAAGTGAAGCCGGTGGTGAATCAGTTTGAAAC
TCACCCATACTTCCAACGTGATTCTCTTGTCAAGTTCTGTCAGAAGCATG
GGATATGTGTCACAGCTCATA
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