FC930975

Overview
NameFC930975
Unique NameFC930975
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length671
Libraries
Library NameType
PostHarvP1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC930975 vs. ExPASy Swiss-Prot
Match: AK1A1_RAT (Alcohol dehydrogenase [NADP+] OS=Rattus norvegicus GN=Akr1a1 PE=1 SV=2)

HSP 1 Score: 150.214 bits (378), Expect = 9.083e-36
Identity = 81/210 (38.57%), Postives = 123/210 (58.57%), Query Frame = 2
Query:   50 AITLNNGFKMPIIGLGVWRMDESNIRDLIINAIKIGYRHIDCAADYRNEAEVGEALAEAFSTG-LVKREDLFITTKLWNSDH--GHVLEACKDSXXXXXXXXXXXXXVHFPVATKHTGVGTTDSALDADGVLEIDTTISLETTWHAMEDLVSMGLVRSIGISNYDIFLTRDCLAYSKVKPVVNQFETHPYFQRDSLVKFCQKHGICVTAH 670
            ++ L+ G KMP+IGLG W+ +   ++  I  A+ +GYRHIDCA+ Y NE E+GEAL E+   G  V RE+LF+T+KLWN+ H    V  A + +             +H+P A +    G      +ADG ++ D+T   + TW A+E LV+ GLV+++G+SN+      D L+ + V+P V Q E HPY  ++ L+  CQ  G+ VTA+
Sbjct:    5 SVLLHTGQKMPLIGLGTWKSEPGQVKAAIKYALSVGYRHIDCASVYGNETEIGEALKESVGAGKAVPREELFVTSKLWNTKHHPEDVEPAVRKTLADLQLEYLDLYLMHWPYAFER---GDNPFPKNADGTVKYDST-HYKETWKALEALVAKGLVKALGLSNFSSRQIDDVLSVASVRPAVLQVECHPYLAQNELIAHCQARGLEVTAY 210          
BLAST of FC930975 vs. ExPASy Swiss-Prot
Match: AK1A1_PONAB (Alcohol dehydrogenase [NADP+] OS=Pongo abelii GN=AKR1A1 PE=2 SV=1)

HSP 1 Score: 149.828 bits (377), Expect = 1.186e-35
Identity = 82/209 (39.23%), Postives = 121/209 (57.89%), Query Frame = 2
Query:   53 ITLNNGFKMPIIGLGVWRMDESNIRDLIINAIKIGYRHIDCAADYRNEAEVGEALAEAFSTG-LVKREDLFITTKLWNSDH--GHVLEACKDSXXXXXXXXXXXXXVHFPVATKHTGVGTTDSALDADGVLEIDTTISLETTWHAMEDLVSMGLVRSIGISNYDIFLTRDCLAYSKVKPVVNQFETHPYFQRDSLVKFCQKHGICVTAH 670
            + L+ G KMP+IGLG W+ +   ++  +  A+ +GYRHIDCAA Y NE E+GEAL E    G  V RE+LF+T+KLWN+ H    V  A + +             +H+P A +    G      +ADG +  D+T   + TW A+E LV+ GLVR++G+SN++     D L+ + V+P V Q E HPY  ++ L+  CQ  G+ VTA+
Sbjct:    6 VLLHTGQKMPLIGLGTWKSEPGQVKAAVKYALSVGYRHIDCAAIYGNEPEIGEALKEDVGPGKAVPREELFVTSKLWNTKHHPEDVEPALQKTLADLQLEYLDLYLMHWPYAFER---GDNPFPKNADGTICYDST-HYKETWKALEALVAKGLVRALGLSNFNSRQIDDILSVASVRPAVLQVECHPYLAQNELIAHCQARGLAVTAY 210          
BLAST of FC930975 vs. ExPASy Swiss-Prot
Match: AK1A1_MOUSE (Alcohol dehydrogenase [NADP+] OS=Mus musculus GN=Akr1a1 PE=1 SV=3)

HSP 1 Score: 147.902 bits (372), Expect = 4.508e-35
Identity = 80/210 (38.10%), Postives = 123/210 (58.57%), Query Frame = 2
Query:   50 AITLNNGFKMPIIGLGVWRMDESNIRDLIINAIKIGYRHIDCAADYRNEAEVGEALAEAFSTG-LVKREDLFITTKLWNSDH--GHVLEACKDSXXXXXXXXXXXXXVHFPVATKHTGVGTTDSALDADGVLEIDTTISLETTWHAMEDLVSMGLVRSIGISNYDIFLTRDCLAYSKVKPVVNQFETHPYFQRDSLVKFCQKHGICVTAH 670
            ++ L+ G KMP+IGLG W+ +   ++  I +A+  GYRHIDCA+ Y NE E+GEAL E+  +G  V RE+LF+T+KLWN+ H    V  A + +             +H+P A +    G      +ADG +  D+T   + TW A+E LV+ GLV+++G+SN++     D L+ + V+P V Q E HPY  ++ L+  C   G+ VTA+
Sbjct:    5 SVLLHTGQKMPLIGLGTWKSEPGQVKAAIKHALSAGYRHIDCASVYGNETEIGEALKESVGSGKAVPREELFVTSKLWNTKHHPEDVEPALRKTLADLQLEYLDLYLMHWPYAFER---GDNPFPKNADGTVRYDST-HYKETWKALEVLVAKGLVKALGLSNFNSRQIDDVLSVASVRPAVLQVECHPYLAQNELIAHCHARGLEVTAY 210          
BLAST of FC930975 vs. ExPASy Swiss-Prot
Match: AK1A1_HUMAN (Alcohol dehydrogenase [NADP+] OS=Homo sapiens GN=AKR1A1 PE=1 SV=3)

HSP 1 Score: 147.132 bits (370), Expect = 7.689e-35
Identity = 81/209 (38.76%), Postives = 121/209 (57.89%), Query Frame = 2
Query:   53 ITLNNGFKMPIIGLGVWRMDESNIRDLIINAIKIGYRHIDCAADYRNEAEVGEALAEAFSTG-LVKREDLFITTKLWNSDH--GHVLEACKDSXXXXXXXXXXXXXVHFPVATKHTGVGTTDSALDADGVLEIDTTISLETTWHAMEDLVSMGLVRSIGISNYDIFLTRDCLAYSKVKPVVNQFETHPYFQRDSLVKFCQKHGICVTAH 670
            + L+ G KMP+IGLG W+ +   ++  +  A+ +GYRHIDCAA Y NE E+GEAL E    G  V RE+LF+T+KLWN+ H    V  A + +             +H+P A +    G      +ADG +  D+T   + TW A+E LV+ GLV+++G+SN++     D L+ + V+P V Q E HPY  ++ L+  CQ  G+ VTA+
Sbjct:    6 VLLHTGQKMPLIGLGTWKSEPGQVKAAVKYALSVGYRHIDCAAIYGNEPEIGEALKEDVGPGKAVPREELFVTSKLWNTKHHPEDVEPALRKTLADLQLEYLDLYLMHWPYAFER---GDNPFPKNADGTICYDST-HYKETWKALEALVAKGLVQALGLSNFNSRQIDDILSVASVRPAVLQVECHPYLAQNELIAHCQARGLEVTAY 210          
BLAST of FC930975 vs. ExPASy Swiss-Prot
Match: ALDR_RAT (Aldose reductase OS=Rattus norvegicus GN=Akr1b1 PE=1 SV=3)

HSP 1 Score: 146.747 bits (369), Expect = 1.004e-34
Identity = 87/211 (41.23%), Postives = 115/211 (54.50%), Query Frame = 2
Query:   53 ITLNNGFKMPIIGLGVWRMDESNIRDLIINAIKIGYRHIDCAADYRNEAEVGEALAEAFSTGLVKREDLFITTKLWNS--DHGHVLEACKDSXXXXXXXXXXXXXVHFPVATKHTGVGTTDSALDADG-VLEIDTTISLETTWHAMEDLVSMGLVRSIGISNYDIFLTRDCLAYS--KVKPVVNQFETHPYFQRDSLVKFCQKHGICVTAH 670
            + LNNG KMP +GLG W+     + + +  AI +GYRHIDCA  Y+NE EVG AL E     +VKR+DLFI +KLW +  D   V  AC+ +             +H+P   K    G     LDA G V+  DT      TW AME LV  GLV++IG+SN++       L     K KP VNQ E HPY  ++ L+++C   GI VTA+
Sbjct:    5 LELNNGTKMPTLGLGTWKSPPGQVTEAVKVAIDMGYRHIDCAQVYQNEKEVGVALQEKLKEQVVKRQDLFIVSKLWCTFHDQSMVKGACQKTLSDLQLDYLDLYLIHWPTGFK---PGPDYFPLDASGNVIPSDT--DFVDTWTAMEQLVDEGLVKAIGVSNFNPLQIERILNKPGLKYKPAVNQIECHPYLTQEKLIEYCHCKGIVVTAY 210          
BLAST of FC930975 vs. ExPASy Swiss-Prot
Match: XYL1_CANPA (NADH-dependent D-xylose reductase OS=Candida parapsilosis GN=XYL1 PE=1 SV=1)

HSP 1 Score: 145.206 bits (365), Expect = 2.922e-34
Identity = 82/211 (38.86%), Postives = 111/211 (52.61%), Query Frame = 2
Query:   50 AITLNNGFKMPIIGLGVWRMDESNIRDLIINAIKIGYRHIDCAADYRNEAEVGEALAEAFSTGLVKREDLFITTKLWNSDHG--HVLEACKDSXXXXXXXXXXXXXVHFPVATKHTGVGT--TDSALDADGVLEIDTTISLETTWHAMEDLVSMGLVRSIGISNYDIFLTRDCLAYSKVKPVVNQFETHPYFQRDSLVKFCQKHGICVTAH 670
            A+ LN+G+++P++G G W++      D I  AIK GYR  D A DY NE EVGE +  A   G+VKRE+LFIT+KLWNS H   +V  A   +             +HFP+A K   +           DG       + L  TW A+E LV  GL +SIGISN+   L  D +    +KPV  Q E HPY  +  LV++ Q H I +T +
Sbjct:    9 AVKLNSGYEIPLVGFGCWKLTNDVASDQIYRAIKSGYRLFDGAEDYANEQEVGEGIKRAIKEGIVKREELFITSKLWNSFHDKKNVEVALMKTLSDLNLDYVDLFYIHFPIAQKPVPIEKKYPPGFYCGDGDKWSIEEVPLLDTWRALEKLVDQGLAKSIGISNFSAQLIYDLIRGCTIKPVALQIEHHPYLTQPKLVEYVQLHDIQITGY 219          
BLAST of FC930975 vs. ExPASy Swiss-Prot
Match: ALDR_BOVIN (Aldose reductase OS=Bos taurus GN=AKR1B1 PE=1 SV=1)

HSP 1 Score: 144.05 bits (362), Expect = 6.509e-34
Identity = 85/210 (40.48%), Postives = 113/210 (53.81%), Query Frame = 2
Query:   53 ITLNNGFKMPIIGLGVWRMDESNIRDLIINAIKIGYRHIDCAADYRNEAEVGEALAEAFSTGLVKREDLFITTKLWNSDHGH--VLEACKDSXXXXXXXXXXXXXVHFPVATKHTGVGTTDSALDADGVLEIDTTISLETTWHAMEDLVSMGLVRSIGISNYDIFLTRDCLAYS--KVKPVVNQFETHPYFQRDSLVKFCQKHGICVTAH 670
            I L  G KMPI+GLG W+     + + +  AI +GYRHIDCA  Y+NE EVG AL       +VKREDLFI +KLW + H    V  AC+ +             +H+P   K    G     LD DG + I +      TW AME+LV  GLV++IG+SN++       L     K KP VNQ E HPY  ++ L+++C   GI VTA+
Sbjct:    4 IVLYTGAKMPILGLGTWKSPPGKVTEAVKVAIDLGYRHIDCAHVYQNENEVGLALQAKLQEQVVKREDLFIVSKLWCTYHDKDLVKGACQKTLSDLKLDYLDLYLIHWPTGFK---PGKDFFPLDEDGNV-IPSEKDFVDTWTAMEELVDEGLVKAIGVSNFNHLQVEKILNKPGLKYKPAVNQIECHPYLTQEKLIQYCNSKGIVVTAY 209          
BLAST of FC930975 vs. ExPASy Swiss-Prot
Match: ALDR_MOUSE (Aldose reductase OS=Mus musculus GN=Akr1b1 PE=1 SV=3)

HSP 1 Score: 143.665 bits (361), Expect = 8.501e-34
Identity = 86/211 (40.76%), Postives = 114/211 (54.03%), Query Frame = 2
Query:   53 ITLNNGFKMPIIGLGVWRMDESNIRDLIINAIKIGYRHIDCAADYRNEAEVGEALAEAFSTGLVKREDLFITTKLWNS--DHGHVLEACKDSXXXXXXXXXXXXXVHFPVATKHTGVGTTDSALDADG-VLEIDTTISLETTWHAMEDLVSMGLVRSIGISNYDIFLTRDCLAYS--KVKPVVNQFETHPYFQRDSLVKFCQKHGICVTAH 670
            + LNNG KMP +GLG W+     + + +  AI +GYRHIDCA  Y+NE EVG AL E     +VKR+DLFI +KLW +  D   V  A + +             +H+P   K    G     LDA G V+  DT      TW AME LV  GLV++IG+SN++       L     K KP VNQ E HPY  ++ L+++C   GI VTA+
Sbjct:    5 LELNNGTKMPTLGLGTWKSPPGQVTEAVKVAIDLGYRHIDCAQVYQNEKEVGVALQEKLKEQVVKRQDLFIVSKLWCTFHDKSMVKGAFQKTLSDLQLDYLDLYLIHWPTGFK---PGPDYFPLDASGNVIPSDT--DFVDTWTAMEQLVDEGLVKTIGVSNFNPLQIERILNKPGLKYKPAVNQIECHPYLTQEKLIEYCHSKGIVVTAY 210          
BLAST of FC930975 vs. ExPASy Swiss-Prot
Match: AK1A1_XENLA (Alcohol dehydrogenase [NADP+] OS=Xenopus laevis GN=akr1a1 PE=2 SV=1)

HSP 1 Score: 143.28 bits (360), Expect = 1.110e-33
Identity = 80/208 (38.46%), Postives = 117/208 (56.25%), Query Frame = 2
Query:   56 TLNNGFKMPIIGLGVWRMDESNIRDLIINAIKIGYRHIDCAADYRNEAEVGEALAEAFSTGL-VKREDLFITTKLWNSDH--GHVLEACKDSXXXXXXXXXXXXXVHFPVATKHTGVGTTDSALDADGVLEIDTTISLETTWHAMEDLVSMGLVRSIGISNYDIFLTRDCLAYSKVKPVVNQFETHPYFQRDSLVKFCQKHGICVTAH 670
            TL  G KMP+IGLG W+     ++D +  A+ +GYRHIDCA  Y NE EVGEA+ E+      +KRE++F+T+KLWN+ H    V  A + +             +H+P A K    G      + DG ++ D T   + TW AME LV  GL ++IG+SN++     D L+ + VKP V Q E HPY  ++ L+  C+ HG+ +T +
Sbjct:    9 TLYTGQKMPLIGLGTWKSAPGQVKDAVKYALGVGYRHIDCAFVYGNETEVGEAIKESVGPDKGLKREEVFVTSKLWNNKHHPDDVECALRKTLQELQLDYLDLYLMHWPYAFKR---GDQVFPQNPDGSVQYDLT-DYKDTWKAMEKLVEKGLAKAIGLSNFNKRQMDDILSIATVKPAVLQVECHPYLAQNELIACCRSHGLVLTGY 212          
BLAST of FC930975 vs. ExPASy Swiss-Prot
Match: XYL1_CANTE (NAD(P)H-dependent D-xylose reductase OS=Candida tenuis GN=XYL1 PE=1 SV=1)

HSP 1 Score: 141.739 bits (356), Expect = 3.230e-33
Identity = 78/210 (37.14%), Postives = 114/210 (54.29%), Query Frame = 2
Query:   53 ITLNNGFKMPIIGLGVWRMDESNIRDLIINAIKIGYRHIDCAADYRNEAEVGEALAEAFSTGLVKREDLFITTKLWNSDHG--HVLEACKDSXXXXXXXXXXXXXVHFPVATKHTGVGT--TDSALDADGVLEIDTTISLETTWHAMEDLVSMGLVRSIGISNYDIFLTRDCLAYSKVKPVVNQFETHPYFQRDSLVKFCQKHGICVTAH 670
            I L++G  MP IG G W++  +   + +  AIK GYR  D A DY NE EVG+ +  A   GLVKRE++F+T+KLWN+ H   +V  A   +             +HFP+A K   +           DG   +   + +  TW A+E LV+ G ++SIG+SN+   L  D L  + +KP V Q E HPY Q+  L++F QK G+ +TA+
Sbjct:    8 IKLSSGHLMPSIGFGCWKLANATAGEQVYQAIKAGYRLFDGAEDYGNEKEVGDGVKRAIDEGLVKREEIFLTSKLWNNYHDPKNVETALNKTLADLKVDYVDLFLIHFPIAFKFVPIEEKYPPGFYCGDGNNFVYEDVPILETWKALEKLVAAGKIKSIGVSNFPGALLLDLLRGATIKPAVLQVEHHPYLQQPKLIEFAQKAGVTITAY 217          
The following BLAST results are available for this feature:
BLAST of FC930975 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 127
Match NameE-valueIdentityDescription
AK1A1_RAT9.083e-3638.57Alcohol dehydrogenase [NADP+] OS=Rattus norvegicus... [more]
AK1A1_PONAB1.186e-3539.23Alcohol dehydrogenase [NADP+] OS=Pongo abelii GN=A... [more]
AK1A1_MOUSE4.508e-3538.10Alcohol dehydrogenase [NADP+] OS=Mus musculus GN=A... [more]
AK1A1_HUMAN7.689e-3538.76Alcohol dehydrogenase [NADP+] OS=Homo sapiens GN=A... [more]
ALDR_RAT1.004e-3441.23Aldose reductase OS=Rattus norvegicus GN=Akr1b1 PE... [more]
XYL1_CANPA2.922e-3438.86NADH-dependent D-xylose reductase OS=Candida parap... [more]
ALDR_BOVIN6.509e-3440.48Aldose reductase OS=Bos taurus GN=AKR1B1 PE=1 SV=1[more]
ALDR_MOUSE8.501e-3440.76Aldose reductase OS=Mus musculus GN=Akr1b1 PE=1 SV... [more]
AK1A1_XENLA1.110e-3338.46Alcohol dehydrogenase [NADP+] OS=Xenopus laevis GN... [more]
XYL1_CANTE3.230e-3337.14NAD(P)H-dependent D-xylose reductase OS=Candida te... [more]

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Properties
Property NameValue
Genbank descriptionC34100A10EF PostHarvP1 Citrus clementina cDNA clone C34100A10, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC930975 ID=FC930975; Name=FC930975; organism=Citrus clementina; type=EST; length=671bp
CAGAGCAAAAGCAGAGAAAGAAAGGGTGAGTGAGTAAAGAGAAATAATGG
CAATAACACTCAACAATGGATTCAAGATGCCAATAATTGGACTGGGTGTT
TGGCGCATGGATGAATCAAACATTAGAGACCTCATCATCAATGCCATCAA
GATTGGCTATCGCCATATTGACTGTGCTGCTGATTATAGGAATGAAGCGG
AAGTTGGGGAGGCACTTGCAGAAGCATTTAGCACTGGGCTTGTCAAGAGG
GAGGATCTTTTCATTACCACCAAGCTTTGGAATTCAGATCATGGACATGT
TCTGGAGGCCTGTAAGGACAGTTTAAAGAAGCTCCAACTGGATTATCTAG
ATCTCTACCTCGTCCATTTTCCTGTAGCCACAAAACACACTGGCGTTGGT
ACAACTGATAGTGCATTAGATGCGGATGGTGTGCTGGAGATAGACACAAC
TATATCATTGGAAACAACCTGGCATGCAATGGAGGATTTGGTTTCAATGG
GTTTAGTTCGAAGCATTGGGATCAGCAACTATGACATCTTTTTAACAAGA
GACTGCTTAGCTTACTCCAAAGTGAAGCCGGTGGTGAATCAGTTTGAAAC
TCACCCATACTTCCAACGTGATTCTCTTGTCAAGTTCTGTCAGAAGCATG
GGATATGTGTCACAGCTCATA
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