FC930975

Overview
NameFC930975
Unique NameFC930975
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length671
Libraries
Library NameType
PostHarvP1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC930975 vs. ExPASy Swiss-Prot
Match: AK1C4_HUMAN (Aldo-keto reductase family 1 member C4 OS=Homo sapiens GN=AKR1C4 PE=1 SV=2)

HSP 1 Score: 119.013 bits (297), Expect = 2.242e-26
Identity = 77/216 (35.65%), Postives = 109/216 (50.46%), Query Frame = 2
Query:   53 ITLNNGFKMPIIGLGVWRMDE---SNIRDLIINAIKIGYRHIDCAADYRNEAEVGEALAEAFSTGLVKREDLFITTKLWNS--DHGHVLEACKDSXXXXXXXXXXXXXVHFPVATKHTGVGTTDSALDADGVLEIDTTISLETTWHAMEDLVSMGLVRSIGISNY-----DIFLTRDCLAYSKVKPVVNQFETHPYFQRDSLVKFCQKHGICVTAH 670
            + LN+G  MP++G G +   E   +   ++   AI+ G+RHID A  Y NE +VG A+    + G VKRED+F T+KLW +      V  A + S             +HFP+A K    G T    D +G +  D T+ L  TW  ME     GL +SIG+SN+     ++ L +  L Y   KPV NQ E HPY  +  L+ FC+   I + AH
Sbjct:    8 VELNDGHFMPVLGFGTYAPPEVPRNRAVEVTKLAIEAGFRHIDSAYLYNNEEQVGLAIRSKIADGSVKREDIFYTSKLWCTFFQPQMVQPALESSLKKLQLDYVDLYLLHFPMALK---PGETPLPKDENGKVIFD-TVDLSATWEVMEKCKDAGLAKSIGVSNFNCRQLEMILNKPGLKY---KPVCNQVECHPYLNQSKLLDFCKSKDIVLVAH 216          
BLAST of FC930975 vs. ExPASy Swiss-Prot
Match: AK1C1_HUMAN (Aldo-keto reductase family 1 member C1 OS=Homo sapiens GN=AKR1C1 PE=1 SV=1)

HSP 1 Score: 119.013 bits (297), Expect = 2.242e-26
Identity = 77/216 (35.65%), Postives = 111/216 (51.39%), Query Frame = 2
Query:   53 ITLNNGFKMPIIGLGVW---RMDESNIRDLIINAIKIGYRHIDCAADYRNEAEVGEALAEAFSTGLVKREDLFITTKLWNSDHGH--VLEACKDSXXXXXXXXXXXXXVHFPVATKHTGVGTTDSALDADGVLEIDTTISLETTWHAMEDLVSMGLVRSIGISNY-----DIFLTRDCLAYSKVKPVVNQFETHPYFQRDSLVKFCQKHGICVTAH 670
            + LN+G  MP++G G +    + +S   +    AI+ G+RHID A  Y NE +VG A+    + G VKRED+F T+KLW + H    V  A + S             +HFPV+ K    G      D +G +  D T+ L  TW A+E     GL +SIG+SN+     ++ L +  L Y   KPV NQ E HPYF +  L+ FC+   I + A+
Sbjct:    8 VKLNDGHFMPVLGFGTYAPAEVPKSKALEATKLAIEAGFRHIDSAHLYNNEEQVGLAIRSKIADGSVKREDIFYTSKLWCNSHRPELVRPALERSLKNLQLDYVDLYLIHFPVSVK---PGEEVIPKDENGKILFD-TVDLCATWEAVEKCKDAGLAKSIGVSNFNRRQLEMILNKPGLKY---KPVCNQVECHPYFNQRKLLDFCKSKDIVLVAY 216          
BLAST of FC930975 vs. ExPASy Swiss-Prot
Match: AK1C1_PONAB (Aldo-keto reductase family 1 member C1 homolog OS=Pongo abelii GN=AKR1C1 PE=2 SV=1)

HSP 1 Score: 118.627 bits (296), Expect = 2.929e-26
Identity = 79/216 (36.57%), Postives = 109/216 (50.46%), Query Frame = 2
Query:   53 ITLNNGFKMPIIGLGVWRMDE---SNIRDLIINAIKIGYRHIDCAADYRNEAEVGEALAEAFSTGLVKREDLFITTKLWNSDHGH--VLEACKDSXXXXXXXXXXXXXVHFPVATKHTGVGTTDSALDADGVLEIDTTISLETTWHAMEDLVSMGLVRSIGISNY-----DIFLTRDCLAYSKVKPVVNQFETHPYFQRDSLVKFCQKHGICVTAH 670
            + LN+   MP++G G +   E   S   +    AI+ G+RHID A  Y NE +VG A+    + G VKRED+F T+KLW + H    V  A + S             VHFPV+ K    G      D +G +  D T+ L  TW AME     GL +SIG+SN+     ++ L +  L Y   KPV NQ E HPYF +  L+ FC+   I + A+
Sbjct:    8 VKLNDSHFMPVLGFGTYAPPEVPKSKALEATKLAIEAGFRHIDSAHLYNNEEQVGLAIRSKIADGSVKREDIFYTSKLWCNSHRPELVRPALERSLKNLQLDYVDLYLVHFPVSVK---PGEEVIPKDENGKILFD-TVDLCATWEAMEKCKDAGLAKSIGVSNFNRRQLEMILNKPGLKY---KPVCNQVECHPYFNQRKLLDFCKSKDIVLVAY 216          
BLAST of FC930975 vs. ExPASy Swiss-Prot
Match: AK1C4_MACFA (Aldo-keto reductase family 1 member C4 OS=Macaca fascicularis GN=AKR1C4 PE=1 SV=1)

HSP 1 Score: 118.242 bits (295), Expect = 3.825e-26
Identity = 77/216 (35.65%), Postives = 109/216 (50.46%), Query Frame = 2
Query:   53 ITLNNGFKMPIIGLGVWRMDE---SNIRDLIINAIKIGYRHIDCAADYRNEAEVGEALAEAFSTGLVKREDLFITTKLWNSDHGH--VLEACKDSXXXXXXXXXXXXXVHFPVATKHTGVGTTDSALDADGVLEIDTTISLETTWHAMEDLVSMGLVRSIGISNY-----DIFLTRDCLAYSKVKPVVNQFETHPYFQRDSLVKFCQKHGICVTAH 670
            + LN+G  MP++G G +   E   + + ++   AI+ G+RHID A  Y NE +VG A+    + G VKRED+F T+KLW +      V  A + S             +HFP+A K    G T    D +G +  D T+ L   W AME     GL +SIG+SN+     ++ L    L Y   KPV NQ E HPY  +  L+ FC+   I + AH
Sbjct:    8 VALNDGHFMPVLGFGTYAPPEVPRNRVVEVTKLAIEAGFRHIDSAYLYNNEEQVGLAIRSKIADGSVKREDIFYTSKLWCTFFRPQLVQPALESSLKKLQLDYVDLYLIHFPMALK---PGETPLPKDENGKVMFD-TVDLCAIWEAMEKCKDAGLAKSIGVSNFNRRQLEMILNNPGLKY---KPVCNQVECHPYLNQSKLLDFCKSKDIVLVAH 216          
BLAST of FC930975 vs. ExPASy Swiss-Prot
Match: AK1D1_HUMAN (3-oxo-5-beta-steroid 4-dehydrogenase OS=Homo sapiens GN=AKR1D1 PE=1 SV=1)

HSP 1 Score: 117.857 bits (294), Expect = 4.995e-26
Identity = 79/217 (36.41%), Postives = 114/217 (52.53%), Query Frame = 2
Query:   53 ITLNNGFKMPIIGLGVWRMDESNIRDLIINAIKI----GYRHIDCAADYRNEAEVGEALAEAFSTGLVKREDLFITTKLWNSDH--GHVLEACKDSXXXXXXXXXXXXXVHFPVATKHTGVGTTDSALDADGVLEIDTTISLETTWHAMEDLVSMGLVRSIGISNY-----DIFLTRDCLAYSKVKPVVNQFETHPYFQRDSLVKFCQKHGICVTAH 670
            I L++G  +PIIGLG +   +S  +     ++K+    GYRHID A  Y+NE EVGEA+ E  + G V+RED+F   KLW ++H    V    + +             +  P+A K    G      D +G      + +L  TW AME     GLV+S+G+SN+     ++ L +  L   K KPV NQ E HPYF +  L+KFCQ+H I +TA+
Sbjct:   10 IPLSDGNSIPIIGLGTYSEPKSTPKGACATSVKVAIDTGYRHIDGAYIYQNEHEVGEAIREKIAEGKVRREDIFYCGKLWATNHVPEMVRPTLERTLRVLQLDYVDLYIIEVPMAFK---PGDEIYPRDENGKWLYHKS-NLCATWEAMEACKDAGLVKSLGVSNFNRRQLELILNKPGL---KHKPVSNQVECHPYFTQPKLLKFCQQHDIVITAY 219          
BLAST of FC930975 vs. ExPASy Swiss-Prot
Match: YBN4_SCHPO (Uncharacterized oxidoreductase C8E4.04 OS=Schizosaccharomyces pombe GN=SPBC8E4.04 PE=2 SV=1)

HSP 1 Score: 117.472 bits (293), Expect = 6.524e-26
Identity = 75/207 (36.23%), Postives = 110/207 (53.14%), Query Frame = 2
Query:   56 TLNNGFKMPIIGLGVWRMDESNIRDLIINAIKIGYRHIDCAADYRNEAEVGEALAEAFSTGLVKREDLFITTKLWNSDH--GHVLEACKDSXXXXXXXXXXXXXVHFPVATKHTGVGTTDSALDADGVLEIDTTISLETTWHAMEDLVSMGLVRSIGISNYDIFLTRDCLAYSKVKPVVNQFETHPYFQRDSLVKFCQKHGICVTAH 670
            TL NG K+P IGLG WR  +   ++ +  A+K GYRHID A  Y NE E+GE + E+     V R D+++T+KLW + H  G V  A + +             +H+P A      G  +   +  G L I   + +E TW AME+L+  G VR IGISN++       L  +KVKP ++Q E HPY  +   ++  +K  I V+A+
Sbjct:   16 TLPNGDKIPSIGLGTWRSGKDETKNAVCAALKAGYRHIDTAHIYGNEKEIGEGIRESG----VPRTDIWVTSKLWCNAHRAGLVPLALEKTLQDLNLEYIDAYLIHWPFALLS---GPEELPRNEKGEL-IYEDVPIEETWQAMEELLETGKVRYIGISNFNNEYLDRVLKIAKVKPTIHQMELHPYLPQTEYLEKHKKLQIHVSAY 214          
BLAST of FC930975 vs. ExPASy Swiss-Prot
Match: AK1CO_HORSE (Aldo-keto reductase family 1 member C23-like protein OS=Equus caballus GN=PGFS PE=1 SV=1)

HSP 1 Score: 117.472 bits (293), Expect = 6.524e-26
Identity = 78/214 (36.45%), Postives = 107/214 (50.00%), Query Frame = 2
Query:   59 LNNGFKMPIIGLGVWRMDE---SNIRDLIINAIKIGYRHIDCAADYRNEAEVGEALAEAFSTGLVKREDLFITTKLWNS--DHGHVLEACKDSXXXXXXXXXXXXXVHFPVATKHTGVGTTDSALDADGVLEIDTTISLETTWHAMEDLVSMGLVRSIGISNY-----DIFLTRDCLAYSKVKPVVNQFETHPYFQRDSLVKFCQKHGICVTAH 670
            LN+G  +P++G G +  +E   S   ++   AI  G+RHID A  Y NE EVG+A+      G VKRED+F T+KLW +      V  A + S             +HFP+A K    G      D  G L  D T+ L  TW AME     GL +SIG+SN+     ++ L +  L Y   KPV NQ E HPY  +  L+ FC+   I + A+
Sbjct:   10 LNDGHVIPVLGFGTYAPEEVPKSRTVEVTKLAIDAGFRHIDSAYSYNNEKEVGQAIRSKIEDGTVKREDIFYTSKLWLTFLRPELVRPALEKSLTNLQLDYVDLYIIHFPIALK---PGEELFPEDEHGKLIFD-TVDLCATWEAMEKCKDAGLAKSIGVSNFNRRQLEMILNKPGLKY---KPVCNQVECHPYLNQSKLLDFCKSKDIVLVAY 216          
BLAST of FC930975 vs. ExPASy Swiss-Prot
Match: AK1C4_MACFU (Aldo-keto reductase family 1 member C4 OS=Macaca fuscata fuscata GN=AKR1C4 PE=1 SV=1)

HSP 1 Score: 117.472 bits (293), Expect = 6.524e-26
Identity = 77/216 (35.65%), Postives = 109/216 (50.46%), Query Frame = 2
Query:   53 ITLNNGFKMPIIGLGVWRMDE---SNIRDLIINAIKIGYRHIDCAADYRNEAEVGEALAEAFSTGLVKREDLFITTKLWNSDHGH--VLEACKDSXXXXXXXXXXXXXVHFPVATKHTGVGTTDSALDADGVLEIDTTISLETTWHAMEDLVSMGLVRSIGISNY-----DIFLTRDCLAYSKVKPVVNQFETHPYFQRDSLVKFCQKHGICVTAH 670
            + LN+G  MP++G G +   E   + + ++   AI+ G+RHID A  Y NE +VG A+    + G VKRED+F T+KLW +      V  A + S             +HFP+A K    G T    D +G +  D T+ L   W AME     GL +SIG+SN+     ++ L    L Y   KPV NQ E HPY  +  L+ FC+   I + AH
Sbjct:    8 VALNDGHFMPVLGFGSYAPPEVPRNRVVEVTKLAIEAGFRHIDSAYLYNNEEQVGLAIRSKIADGSVKREDIFYTSKLWCTFFRPQLVQPALESSLKKLQLDYVDLYLIHFPMALK---PGETPLPKDENGKVMFD-TVDLCAIWEAMEKCKDAGLAKSIGVSNFNRRQLEMILNNPGLKY---KPVCNQVECHPYLNQSKLLDFCKSKDIVLVAH 216          
BLAST of FC930975 vs. ExPASy Swiss-Prot
Match: P100_LEIMA (Probable reductase OS=Leishmania major GN=P100/11E PE=2 SV=2)

HSP 1 Score: 116.701 bits (291), Expect = 1.113e-25
Identity = 77/208 (37.02%), Postives = 102/208 (49.04%), Query Frame = 2
Query:   53 ITLNNGFKMPIIGLGVWRMDESNIRDLIIN-AIKIGYRHIDCAADYRNEAEVGEALAEAFSTGLVKREDLFITTKLWNSDHGH--VLEACKDSXXXXXXXXXXXXXVHFPVATKHTGVGTTDSALDADGVLEIDTTISLETTWHAMEDLVSMGLVRSIGISNYDIFLTRDCLAYSKVKPVVNQFETHPYFQRDSLVKFCQKHGICVTA 667
            +TL+NG KMP  GLGVW+     + +  +N A+  GYRHID AA Y+NE  VG  L  +     V RED+FITTKLWN++ G+   L A ++S             +H+P              L  +G   +D+       W A E L     VR+IG+SN+ I    D LA   V P+VNQ E HP   +  L  FC    I V A
Sbjct:    9 VTLSNGVKMPQFGLGVWQSPAGEVTENAVNWALCAGYRHIDTAAIYKNEESVGAGLRASG----VPREDVFITTKLWNTEQGYESTLAAFEESRQKLGVDYIDLYLIHWPRGK---------DILSKEGKKYLDS-------WRAFEQLYKEKKVRAIGVSNFHIHHLEDVLAMCTVTPMVNQVELHPLNNQADLRAFCDAKQIKVEA 196          
BLAST of FC930975 vs. ExPASy Swiss-Prot
Match: PGFS1_BOVIN (Prostaglandin F synthase 1 OS=Bos taurus PE=1 SV=3)

HSP 1 Score: 116.316 bits (290), Expect = 1.453e-25
Identity = 75/216 (34.72%), Postives = 113/216 (52.31%), Query Frame = 2
Query:   53 ITLNNGFKMPIIGLGVWRMDE---SNIRDLIINAIKIGYRHIDCAADYRNEAEVGEALAEAFSTGLVKREDLFITTKLW-NSDHGHVLE-ACKDSXXXXXXXXXXXXXVHFPVATKHTGVGTTDSALDADGVLEIDTTISLETTWHAMEDLVSMGLVRSIGISNY-----DIFLTRDCLAYSKVKPVVNQFETHPYFQRDSLVKFCQKHGICVTAH 670
            + LN+G  +P++G G +  +E   S   +    AI++G+RH+D A  Y+NE +VG+A+    + G VKRED+F T+KLW NS    ++  A + S             +H PV+ K    G      D  G L  D ++ L  TW A+E     GL +SIG+SN+     +  L +  L Y   KPV NQ E HPY  +  L++FC+ H I + A+
Sbjct:    8 VKLNDGHFIPVLGFGTYAPEEVPKSEALEATKFAIEVGFRHVDSAHLYQNEEQVGQAIRSKIADGTVKREDIFYTSKLWCNSLQPELVRPALEKSLQNLQLDYVDLYIIHSPVSLK---PGNKFVPKDESGKLIFD-SVDLCHTWEALEKCKDAGLTKSIGVSNFNHKQLEKILNKPGLKY---KPVCNQVECHPYLNQSKLLEFCKSHDIVLVAY 216          
The following BLAST results are available for this feature:
BLAST of FC930975 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 127
Match NameE-valueIdentityDescription
AK1C4_HUMAN2.242e-2635.65Aldo-keto reductase family 1 member C4 OS=Homo sap... [more]
AK1C1_HUMAN2.242e-2635.65Aldo-keto reductase family 1 member C1 OS=Homo sap... [more]
AK1C1_PONAB2.929e-2636.57Aldo-keto reductase family 1 member C1 homolog OS=... [more]
AK1C4_MACFA3.825e-2635.65Aldo-keto reductase family 1 member C4 OS=Macaca f... [more]
AK1D1_HUMAN4.995e-2636.413-oxo-5-beta-steroid 4-dehydrogenase OS=Homo sapie... [more]
YBN4_SCHPO6.524e-2636.23Uncharacterized oxidoreductase C8E4.04 OS=Schizosa... [more]
AK1CO_HORSE6.524e-2636.45Aldo-keto reductase family 1 member C23-like prote... [more]
AK1C4_MACFU6.524e-2635.65Aldo-keto reductase family 1 member C4 OS=Macaca f... [more]
P100_LEIMA1.113e-2537.02Probable reductase OS=Leishmania major GN=P100/11E... [more]
PGFS1_BOVIN1.453e-2534.72Prostaglandin F synthase 1 OS=Bos taurus PE=1 SV=3[more]

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Properties
Property NameValue
Genbank descriptionC34100A10EF PostHarvP1 Citrus clementina cDNA clone C34100A10, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC930975 ID=FC930975; Name=FC930975; organism=Citrus clementina; type=EST; length=671bp
CAGAGCAAAAGCAGAGAAAGAAAGGGTGAGTGAGTAAAGAGAAATAATGG
CAATAACACTCAACAATGGATTCAAGATGCCAATAATTGGACTGGGTGTT
TGGCGCATGGATGAATCAAACATTAGAGACCTCATCATCAATGCCATCAA
GATTGGCTATCGCCATATTGACTGTGCTGCTGATTATAGGAATGAAGCGG
AAGTTGGGGAGGCACTTGCAGAAGCATTTAGCACTGGGCTTGTCAAGAGG
GAGGATCTTTTCATTACCACCAAGCTTTGGAATTCAGATCATGGACATGT
TCTGGAGGCCTGTAAGGACAGTTTAAAGAAGCTCCAACTGGATTATCTAG
ATCTCTACCTCGTCCATTTTCCTGTAGCCACAAAACACACTGGCGTTGGT
ACAACTGATAGTGCATTAGATGCGGATGGTGTGCTGGAGATAGACACAAC
TATATCATTGGAAACAACCTGGCATGCAATGGAGGATTTGGTTTCAATGG
GTTTAGTTCGAAGCATTGGGATCAGCAACTATGACATCTTTTTAACAAGA
GACTGCTTAGCTTACTCCAAAGTGAAGCCGGTGGTGAATCAGTTTGAAAC
TCACCCATACTTCCAACGTGATTCTCTTGTCAAGTTCTGTCAGAAGCATG
GGATATGTGTCACAGCTCATA
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