FC930975

Overview
NameFC930975
Unique NameFC930975
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length671
Libraries
Library NameType
PostHarvP1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC930975 vs. ExPASy Swiss-Prot
Match: CRO_RANCA (Rho crystallin OS=Rana catesbeiana PE=1 SV=2)

HSP 1 Score: 109.768 bits (273), Expect = 1.360e-23
Identity = 73/216 (33.80%), Postives = 105/216 (48.61%), Query Frame = 2
Query:   53 ITLNNGFKMPIIGLGVWR---MDESNIRDLIINAIKIGYRHIDCAADYRNEAEVGEALAEAFSTGLVKREDLFITTKLWNS--DHGHVLEACKDSXXXXXXXXXXXXXVHFPVATKHTGVGTTDSALDADGVLEIDTTISLETTWHAMEDLVSMGLVRSIGISNY-----DIFLTRDCLAYSKVKPVVNQFETHPYFQRDSLVKFCQKHGICVTAH 670
            +TLN+G  MPI+GLG +    + +S   + +  AI +GYRHIDCA    NE  +G  +    S G VKRED+F T KLW +      V +  + S             +H+PV+ K +G        D D     D  + L  TW A+E     GLVRS+G+SN+     +  L +  L Y   KPV NQ E H Y  ++ L  +C+   I +  +
Sbjct:    9 VTLNDGNMMPILGLGTYAAPDVPKSLAEEAVKTAIDVGYRHIDCAFITGNEMHIGNGIRSKISDGTVKREDIFYTGKLWCTYFSPDMVRKGLERSLRDVGMDYLDLFLMHWPVSLKPSGASDPS---DKDKPFIYD-NVDLCATWEALEARKDAGLVRSLGVSNFNRRQLERILNKPGLKY---KPVCNQVECHVYLNQNKLHSYCKSKDIVLVTY 217          
BLAST of FC930975 vs. ExPASy Swiss-Prot
Match: AK1CL_RAT (Aldo-keto reductase family 1 member C21 OS=Rattus norvegicus GN=Akr1c21 PE=2 SV=1)

HSP 1 Score: 109.768 bits (273), Expect = 1.360e-23
Identity = 74/216 (34.26%), Postives = 108/216 (50.00%), Query Frame = 2
Query:   53 ITLNNGFKMPIIGLGVWRMDE---SNIRDLIINAIKIGYRHIDCAADYRNEAEVGEALAEAFSTGLVKREDLFITTKLW-NSDHGHVLEACKD-SXXXXXXXXXXXXXVHFPVATKHTGVGTTDSALDADGVLEIDTTISLETTWHAMEDLVSMGLVRSIGISNY-----DIFLTRDCLAYSKVKPVVNQFETHPYFQRDSLVKFCQKHGICVTAH 670
            + LN+G  +P++G G     E   S  +++   AI  G+ H D A  Y  E  VGEA+ E  + G  +RED+F T+KLW  S H  ++ +  + S             +HFP+A K    G  +  +D  G L  D T+ L  TW AME     GL +SIG+SN+     +  L +  L Y   KPV NQ E H Y  +  L+ FC+ +GI + A+
Sbjct:    8 VKLNDGHFIPVLGFGTAMPSELPKSKAKEVTKIAIDAGFHHFDSAFVYNTEDHVGEAIREKIANGTTRREDIFYTSKLWCTSLHPELVRSSLECSLKKLQLDYVDLYLIHFPMALK---PGDENFPVDEHGKLLFD-TVDLCATWEAMEKCKDAGLAKSIGVSNFNRRQLEKILNKPGLKY---KPVCNQVECHLYLNQMKLLDFCKTNGIILVAY 216          
BLAST of FC930975 vs. ExPASy Swiss-Prot
Match: AK1CD_MESAU (Aldo-keto reductase family 1 member C13 OS=Mesocricetus auratus GN=AKR1C13 PE=1 SV=1)

HSP 1 Score: 109.768 bits (273), Expect = 1.360e-23
Identity = 74/211 (35.07%), Postives = 108/211 (51.18%), Query Frame = 2
Query:   65 NGFKMPIIGLGVWR---MDESNIRDLIINAIKIGYRHIDCAADYRNEAEVGEALAEAFSTGLVKREDLFITTKLWNS--DHGHVLEACKDSXXXXXXXXXXXXXVHFPVATKHTGVGTTDSALDADGVLEIDTTISLETTWHAMEDLVSMGLVRSIGISNYDI-----FLTRDCLAYSKVKPVVNQFETHPYFQRDSLVKFCQKHGICVTA 667
            +G  +P +G G ++   + +S   +    AI +GYRHID A  Y+ E E+G+A+      G+VKRED+FITTKLW +      V  + +  XX           +H+PV  K    G  D  LD  G L +D T+    TW A+E     GLV+SIG+SN+++      L +  L Y   KPV NQ E H Y  +  L+ +C+   I + A
Sbjct:   12 DGHCIPALGFGTYKPIEVPKSKAMEAANLAIGVGYRHIDTAYAYQIEEEIGQAIQSNIKAGIVKREDMFITTKLWCTCFQPELVRPSLEKXXXKLQLEHVDLFIMHYPVPMK---AGDNDFPLDEQGKLLLD-TVDFCATWEALEKXXDAGLVKSIGVSNFNMRQLERILNKPGLKY---KPVCNQVECHVYNNQSKLLDYCKSKDIVLVA 215          
BLAST of FC930975 vs. ExPASy Swiss-Prot
Match: YJ66_YEAST (Uncharacterized oxidoreductase YJR096W OS=Saccharomyces cerevisiae GN=YJR096W PE=1 SV=1)

HSP 1 Score: 109.383 bits (272), Expect = 1.777e-23
Identity = 71/212 (33.49%), Postives = 103/212 (48.58%), Query Frame = 2
Query:   59 LNNGFKMPIIGLGVWRMDESNIRDLIINAIKIGYRHIDCAADYRNEAEVGEALAEAFS--TGLVKREDLFITTKLWNSDHGH-----VLEACKDSXXXXXXXXXXXXXVHFPVATKHTGVGTTDSALDADGVLEIDTTISLETTWHAMEDLVSMGLVRSIGISNYDIFLTRDCLAYS--KVKPVVNQFETHPYFQRDSLVKFCQKHGICVTA 667
            L+NGFK+P I LG + +  S   +++   +K GYRH D A  Y NE EVG+ + +  +   G  KRE++F TTKLWNS +G+      +  C +              +H P+                       + + LE TW AM++ V  GLV+SIG+SNY      + L +   K KPVVNQ E  P+  R  L  +C+  G+ V A
Sbjct:    8 LSNGFKIPSIALGTYDIPRSQTAEIVYEGVKCGYRHFDTAVLYGNEKEVGDGIIKWLNEDPGNHKREEIFYTTKLWNSQNGYKRAKAAIRQCLNE--VSGLQYIDLLLIHSPLE---------------------GSKLRLE-TWRAMQEAVDEGLVKSIGVSNYGKKHIDELLNWPELKHKPVVNQIEISPWIMRQELADYCKSKGLVVEA 195          
BLAST of FC930975 vs. ExPASy Swiss-Prot
Match: GR_BACSU (Glyoxal reductase OS=Bacillus subtilis GN=yvgN PE=1 SV=1)

HSP 1 Score: 109.383 bits (272), Expect = 1.777e-23
Identity = 69/208 (33.17%), Postives = 105/208 (50.48%), Query Frame = 2
Query:   53 ITLNNGFKMPIIGLGVWRMDESN-IRDLIINAIKIGYRHIDCAADYRNEAEVGEALAEAFSTGLVKREDLFITTKLWNSDHGH--VLEACKDSXXXXXXXXXXXXXVHFPVATKHTGVGTTDSALDADGVLEIDTTISLETTWHAMEDLVSMGLVRSIGISNYDIFLTRDCLAYSKVKPVVNQFETHPYFQRDSLVKFCQKHGICVTA 667
            + L+NG +MP  GLGV++++  N   + +  AIK GYR ID AA Y+NE  VG  + E+     V RE+LFIT+K+WN D G+   L A + S             +H+P   K+                        + TW A+E L   G +R+IG+SN+ +    + L  +++KP+VNQ E HP   +  L  +C+  GI + A
Sbjct:    9 VKLHNGVEMPWFGLGVFKVENGNEATESVKAAIKNGYRSIDTAAIYKNEEGVGIGIKESG----VAREELFITSKVWNEDQGYETTLAAFEKSLERLQLDYLDLYLIHWPGKDKY------------------------KDTWRALEKLYKDGKIRAIGVSNFQVHHLEELLKDAEIKPMVNQVEFHPRLTQKELRDYCKGQGIQLEA 188          
BLAST of FC930975 vs. ExPASy Swiss-Prot
Match: ARA1_YEAST (D-arabinose dehydrogenase [NAD(P)+] heavy chain OS=Saccharomyces cerevisiae GN=ARA1 PE=1 SV=1)

HSP 1 Score: 109.383 bits (272), Expect = 1.777e-23
Identity = 78/222 (35.14%), Postives = 103/222 (46.40%), Query Frame = 2
Query:   56 TLNNGFKMPIIGLGVWRMDE--SNIRDLIINAIKIGYRHIDCAADYRNEAEVGEALAEAFSTGLVKREDLFITTKLWNSDHGHVLEACKDSXXXXXXXXXXXXXVHFP---------------VATKHTGVGTTDSALDADGVLEIDTTISLETTWHAMEDLVSMGLVRSIGISNYDIFLTRDCLAYSKVKPVVNQFETHPYFQRDSLVKFCQKHGICVTAH 670
            +LNNG ++P +GLG     E  +  +  +  AIK GYRHID A  Y  E  VGEA+ E    G +KREDLFITTK+W      V  +  +S              H+P               V T     G T  A D D    ++T   LE  +    D      VR+IG+SN+ I      +   +VKP VNQ ETHP+  +  L KFC  H I +TA+
Sbjct:   26 SLNNGVRIPALGLGTANPHEKLAETKQAVKAAIKAGYRHIDTAWAYETEPFVGEAIKELLEDGSIKREDLFITTKVWPVLWDEVDRSLNESLKALGLEYVDLLLQHWPLCFEKIKDPKGISGLVKTPVDDSGKTMYAADGD---YLETYKQLEKIYLDPND----HRVRAIGVSNFSIEYLERLIKECRVKPTVNQVETHPHLPQMELRKFCFMHDILLTAY 240          
BLAST of FC930975 vs. ExPASy Swiss-Prot
Match: CRO_RANTE (Rho crystallin OS=Rana temporaria PE=2 SV=3)

HSP 1 Score: 108.612 bits (270), Expect = 3.031e-23
Identity = 73/216 (33.80%), Postives = 105/216 (48.61%), Query Frame = 2
Query:   53 ITLNNGFKMPIIGLGVW---RMDESNIRDLIINAIKIGYRHIDCAADYRNEAEVGEALAEAFSTGLVKREDLFITTKLWNS--DHGHVLEACKDSXXXXXXXXXXXXXVHFPVATKHTGVGTTDSALDADGVLEIDTTISLETTWHAMEDLVSMGLVRSIGISNY-----DIFLTRDCLAYSKVKPVVNQFETHPYFQRDSLVKFCQKHGICVTAH 670
            +TLN+G  MPI+GLG +    + +S   + +  AI +GYRHIDCA    NE  +G  +    S G VKRED+F T KLW +      V +  + S             +H+PV+ K +G        D D     D  + L  TW A+E     GLVRS+G+SN+     +  L +  L Y   KPV NQ E H Y  ++ L  +C+   I +  +
Sbjct:    9 VTLNDGNMMPILGLGTYASPHVPKSLAEEAVKIAIDVGYRHIDCAFITGNEMHIGNGIRSKISDGTVKREDIFYTGKLWCTYFSPEMVRKGLERSLRDVGMDYLDLFLMHWPVSLKPSGASDPS---DKDKPFIYD-NVDLCATWEALEARKDAGLVRSLGVSNFNRRQLERILNKPGLKY---KPVCNQVECHVYLNQNKLHSYCKSKDIVLVTY 217          
BLAST of FC930975 vs. ExPASy Swiss-Prot
Match: AK1CL_MOUSE (Aldo-keto reductase family 1 member C21 OS=Mus musculus GN=Akr1c21 PE=1 SV=2)

HSP 1 Score: 108.612 bits (270), Expect = 3.031e-23
Identity = 72/216 (33.33%), Postives = 108/216 (50.00%), Query Frame = 2
Query:   53 ITLNNGFKMPIIGLGV---WRMDESNIRDLIINAIKIGYRHIDCAADYRNEAEVGEALAEAFSTGLVKREDLFITTKLW-NSDHGHVLEACKD-SXXXXXXXXXXXXXVHFPVATKHTGVGTTDSALDADGVLEIDTTISLETTWHAMEDLVSMGLVRSIGISNY-----DIFLTRDCLAYSKVKPVVNQFETHPYFQRDSLVKFCQKHGICVTAH 670
            + LN+G  +P++G G        +S  ++L   AI  G+ H D A+ Y  E  VGEA+    + G V+RED+F T+K+W  S H  ++ A  + S             +H+P+A K    G  +  +D  G L  D  + L  TW AME     GL +SIG+SN+     ++ L +  L Y   KPV NQ E HPY  +  L+ FC+   I + A+
Sbjct:    8 VILNDGNFIPVLGFGTALPLECPKSKAKELTKIAIDAGFHHFDSASVYNTEDHVGEAIRSKIADGTVRREDIFYTSKVWCTSLHPELVRASLERSLQKLQFDYVDLYLIHYPMALK---PGEENFPVDEHGKLIFD-RVDLCATWEAMEKCKDAGLTKSIGVSNFNYRQLEMILNKPGLKY---KPVCNQVECHPYLNQMKLLDFCKSKDIVLVAY 216          
BLAST of FC930975 vs. ExPASy Swiss-Prot
Match: NADO1_ORYSJ (Probable NAD(P)H-dependent oxidoreductase 1 OS=Oryza sativa subsp. japonica GN=Os10g0113000 PE=1 SV=1)

HSP 1 Score: 107.842 bits (268), Expect = 5.169e-23
Identity = 65/199 (32.66%), Postives = 105/199 (52.76%), Query Frame = 2
Query:   77 MPIIGLGVWRMDESNIRDL---IINAIKIGYRHIDCAADYRNEAEVGEALAEAFSTGLV-KREDLFITTKLWNSD--HGHVLEACKDSXXXXXXXXXXXXXVHFPVATKHTGVGTTDSALDADGVLEIDTTISLETTWHAMEDLVSMGLVRSIGISNYDIFLTRDCLAYSKVKPVVNQFETHPYFQRDSLVKFCQKHGI 655
            MP +G+G      ++  D    ++ AI++GYRH D A  Y  E  VGEA+AEA   GL+  R D+F+T+K+W SD   G V+ A +++             VH+PV+      G  D     + +L    +  +E  W  ME+   +GL R+IG+SN+        L+ + V+P VNQ E +P +Q+ +L + C++ G+
Sbjct:   16 MPRVGMGTAAFPFTSSEDTTAAMLRAIELGYRHFDTARIYATEGCVGEAVAEAVRRGLIASRADVFVTSKIWCSDLHAGRVVPAARETLRNLGMDYVDLLLVHWPVSLTP---GNYDFPFPKEVILP---SFDMEGVWRGMEECHRLGLARAIGVSNFSAKKLEQLLSLAAVRPAVNQVEVNPMWQQRTLREVCRREGV 208          
BLAST of FC930975 vs. ExPASy Swiss-Prot
Match: Y2408_MYCS2 (Uncharacterized oxidoreductase MSMEG_2408 OS=Mycobacterium smegmatis GN=MSMEG_2408 PE=3 SV=1)

HSP 1 Score: 106.686 bits (265), Expect = 1.152e-22
Identity = 70/207 (33.82%), Postives = 95/207 (45.89%), Query Frame = 2
Query:   53 ITLNNGFKMPIIGLGVWRMDESNIRDLIINAIKIGYRHIDCAADYRNEAEVGEALAEAFSTGLVKREDLFITTKLWNSDHGH--VLEACKDSXXXXXXXXXXXXXVHFPVATKHTGVGTTDSALDADGVLEIDTTISLETTWHAMEDLVSMGLVRSIGISNYDIFLTRDCLAYSKVKPVVNQFETHPYFQRDSLVKFCQKHGICVTA 667
            ITLN+G  +P +GLGVW+    +    +  A++ GYRHID AA YRNE E G A+A +     V RED+F+ TKLWNSD G+   L A   S             +H+PV   +  V                       T+ A   L   G +RSIG+SN++       +  + + P VNQ E HP   +  L     K GI   A
Sbjct:    5 ITLNDGNSIPQVGLGVWQTPAEDTERAVAAALQAGYRHIDTAAAYRNETETGRAIANSG----VPREDIFLVTKLWNSDQGYDATLAAFDASVQRLGVDYLDLYLIHWPVPENNKFV----------------------DTFKAFAHLRDQGRIRSIGVSNFEPEHLTTLIEETGIVPAVNQIELHPLLPQQELRDVHAKLGIATEA 185          
The following BLAST results are available for this feature:
BLAST of FC930975 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 127
Match NameE-valueIdentityDescription
CRO_RANCA1.360e-2333.80Rho crystallin OS=Rana catesbeiana PE=1 SV=2[more]
AK1CL_RAT1.360e-2334.26Aldo-keto reductase family 1 member C21 OS=Rattus ... [more]
AK1CD_MESAU1.360e-2335.07Aldo-keto reductase family 1 member C13 OS=Mesocri... [more]
YJ66_YEAST1.777e-2333.49Uncharacterized oxidoreductase YJR096W OS=Saccharo... [more]
GR_BACSU1.777e-2333.17Glyoxal reductase OS=Bacillus subtilis GN=yvgN PE=... [more]
ARA1_YEAST1.777e-2335.14D-arabinose dehydrogenase [NAD(P)+] heavy chain OS... [more]
CRO_RANTE3.031e-2333.80Rho crystallin OS=Rana temporaria PE=2 SV=3[more]
AK1CL_MOUSE3.031e-2333.33Aldo-keto reductase family 1 member C21 OS=Mus mus... [more]
NADO1_ORYSJ5.169e-2332.66Probable NAD(P)H-dependent oxidoreductase 1 OS=Ory... [more]
Y2408_MYCS21.152e-2233.82Uncharacterized oxidoreductase MSMEG_2408 OS=Mycob... [more]

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Properties
Property NameValue
Genbank descriptionC34100A10EF PostHarvP1 Citrus clementina cDNA clone C34100A10, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC930975 ID=FC930975; Name=FC930975; organism=Citrus clementina; type=EST; length=671bp
CAGAGCAAAAGCAGAGAAAGAAAGGGTGAGTGAGTAAAGAGAAATAATGG
CAATAACACTCAACAATGGATTCAAGATGCCAATAATTGGACTGGGTGTT
TGGCGCATGGATGAATCAAACATTAGAGACCTCATCATCAATGCCATCAA
GATTGGCTATCGCCATATTGACTGTGCTGCTGATTATAGGAATGAAGCGG
AAGTTGGGGAGGCACTTGCAGAAGCATTTAGCACTGGGCTTGTCAAGAGG
GAGGATCTTTTCATTACCACCAAGCTTTGGAATTCAGATCATGGACATGT
TCTGGAGGCCTGTAAGGACAGTTTAAAGAAGCTCCAACTGGATTATCTAG
ATCTCTACCTCGTCCATTTTCCTGTAGCCACAAAACACACTGGCGTTGGT
ACAACTGATAGTGCATTAGATGCGGATGGTGTGCTGGAGATAGACACAAC
TATATCATTGGAAACAACCTGGCATGCAATGGAGGATTTGGTTTCAATGG
GTTTAGTTCGAAGCATTGGGATCAGCAACTATGACATCTTTTTAACAAGA
GACTGCTTAGCTTACTCCAAAGTGAAGCCGGTGGTGAATCAGTTTGAAAC
TCACCCATACTTCCAACGTGATTCTCTTGTCAAGTTCTGTCAGAAGCATG
GGATATGTGTCACAGCTCATA
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